RNA–Protein interactions for RNA: ENST00000548025.5

MARF1-205, Transcript of meiosis regulator and mRNA stability factor 1, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARF1, Length 5,891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARF1-205	ENST00000548025	SFSWAP	Q12872	951 aa	Known RBP	12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	GAS2L1	Q99501	681 aa	Predicted RBP	12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	RRAGC	Q9HB90	399 aa		12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	CCDC171	Q6TFL3	1326 aa		12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	CLRN2	A0PK11	232 aa		12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	UBE4A	Q14139	1066 aa		12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	RC3H1	Q5TC82	1133 aa	Known RBP	12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	LARP1B	Q659C4	914 aa	Known RBP	12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	STYK1	Q6J9G0	422 aa		12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	SREK1	Q8WXA9	508 aa	Known RBP	12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	PAG1	Q9NWQ8	432 aa		12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	JAG2	Q9Y219	1238 aa		12.1	□□□□□ -0.47
MARF1-205	ENST00000548025	RNF113A	O15541	343 aa	Known RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	ZBTB43	O43298	467 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	IDE	P14735	1019 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	PODN	Q7Z5L7	613 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	CCDC24	Q8N4L8	307 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	DPP7	Q9UHL4	492 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	TCOF1	Q13428	1488 aa	Known RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	ABCD1	P33897	745 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	KRT85	P78386	507 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	IQCE	Q6IPM2	695 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	ERCC4	Q92889	916 aa	Predicted RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	KIF24	Q5T7B8	1368 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	POLR2M	P0CAP2	368 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	NBPF10	Q6P3W6	841 aa	Known RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	DBNDD1	Q9H9R9	158 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	FCHSD1	Q86WN1	690 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	INO80B	Q9C086	356 aa	Predicted RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	MANSC4	A6NHS7	340 aa	Predicted RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	A1BG	P04217	495 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	USP8	P40818	1118 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	ICA1	Q05084	483 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	TMED8	Q6PL24	325 aa	Predicted RBP	12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	FAM160B2	Q86V87	743 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	EXOC1	Q9NV70	894 aa		12.09	□□□□□ -0.47
MARF1-205	ENST00000548025	CBX1	P83916	185 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	KIAA1524	Q8TCG1	905 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	DDX49	Q9Y6V7	483 aa	Known RBP	12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	PTPRE	P23469	700 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	CCND2	P30279	289 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	GOLGA8F	Q08AF8	430 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	GOLGA8DP	Q0D2H9	430 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	RNF180	Q86T96	592 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	OTUD6B	Q8N6M0	293 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	SMTNL1	A8MU46	457 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	STAMBP	O95630	424 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	CCDC91	Q7Z6B0	441 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	EVA1B	Q9NVM1	165 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	PHLPP2	Q6ZVD8	1323 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	DISP1	Q96F81	1524 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025		F8W8V4	182 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	ARHGEF35	A5YM69	484 aa		12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	GPATCH4	Q5T3I0	446 aa	Known RBP	12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	ADARB2	Q9NS39	739 aa	Known RBP	12.08	□□□□□ -0.48
MARF1-205	ENST00000548025	ATP10D	Q9P241	1426 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	PRPF6	O94906	941 aa	Known RBP	12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	SCNN1D	P51172	638 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	DEFB115	Q30KQ5	88 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	SLC9C1	Q4G0N8	1177 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	MIGA1	Q8NAN2	632 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	GANC	Q8TET4	914 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	KATNAL1	Q9BW62	490 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	EXOC6B	Q9Y2D4	811 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	FDX1	P10109	184 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	PPP2R5D	Q14738	602 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	RBM46	Q8TBY0	533 aa	Known RBP	12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	CCPG1	Q9ULG6	757 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	ASNS	P08243	561 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	XRCC6	P12956	609 aa	Known RBP eCLIP	12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	EPHX2	P34913	555 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	C7orf31	Q8N865	590 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	NACC1	Q96RE7	527 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	IWS1	Q96ST2	819 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	CACYBP	Q9HB71	228 aa	Known RBP	12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	NUB1	Q9Y5A7	615 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	ASB14	A6NK59	587 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	STX10	O60499	249 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	FER	P16591	822 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	FILIP1	Q7Z7B0	1213 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	DEPTOR	Q8TB45	409 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	PSMD1	Q99460	953 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	MFSD1	Q9H3U5	465 aa		12.07	□□□□□ -0.48
MARF1-205	ENST00000548025	TGFBRAP1	Q8WUH2	860 aa		12.06	□□□□□ -0.48
MARF1-205	ENST00000548025	SLC26A6	Q9BXS9	759 aa		12.06	□□□□□ -0.48
MARF1-205	ENST00000548025		A0A1W2PP64	1363 aa		12.06	□□□□□ -0.48
MARF1-205	ENST00000548025	CARNS1	A5YM72	827 aa		12.06	□□□□□ -0.48
MARF1-205	ENST00000548025		F6X3S4	739 aa		12.06	□□□□□ -0.48
MARF1-205	ENST00000548025	SERPINC1	P01008	464 aa		12.06	□□□□□ -0.48
MARF1-205	ENST00000548025	MCMDC2	Q4G0Z9	681 aa		12.06	□□□□□ -0.48
MARF1-205	ENST00000548025	DPH6	Q7L8W6	267 aa		12.06	□□□□□ -0.48
MARF1-205	ENST00000548025	JARID2	Q92833	1246 aa	Predicted RBP	12.06	□□□□□ -0.48
MARF1-205	ENST00000548025	PCCA	P05165	728 aa	Predicted RBP	12.06	□□□□□ -0.48
MARF1-205	ENST00000548025	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms