RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 DLK2Q6UY11 383 aa13.71□□□□□ -0.21
CALCOCO1-208ENST00000547988 HOOK2Q96ED9 719 aa13.71□□□□□ -0.21
CALCOCO1-208ENST00000547988 DDX4Q9NQI0 724 aaKnown RBP13.71□□□□□ -0.21
CALCOCO1-208ENST00000547988 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
CALCOCO1-208ENST00000547988 FLT1P17948 1338 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 MBD4O95243 580 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 CHGBP05060 677 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 GSPT1P15170 499 aaKnown RBP13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 SLFNL1Q499Z3 407 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 NBPF12Q5TAG4 269 aaPredicted RBP13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 PRAMEF18Q5VWM3 479 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 LCORLQ8N3X6 602 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 C2orf69Q8N8R5 385 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 TGFBRAP1Q8WUH2 860 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 AIDAQ96BJ3 306 aa13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 CRNKL1Q9BZJ0 848 aaKnown RBP13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 PUS7LQ9H0K6 701 aaKnown RBP13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 OSBPL5Q9H0X9 879 aaPredicted RBP13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 GBA2Q9HCG7 927 aaPredicted RBP13.7□□□□□ -0.22
CALCOCO1-208ENST00000547988 HIP1O00291 1037 aa13.69□□□□□ -0.22
CALCOCO1-208ENST00000547988 USP5P45974 858 aa13.69□□□□□ -0.22
CALCOCO1-208ENST00000547988 OSBP2Q969R2 916 aa13.69□□□□□ -0.22
CALCOCO1-208ENST00000547988 PHIPQ8WWQ0 1821 aa13.69□□□□□ -0.22
CALCOCO1-208ENST00000547988 PPP1R12BO60237 982 aaPredicted RBP13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 SDSP20132 328 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 MAPKAPK5Q8IW41 473 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 ZSCAN29Q8IWY8 852 aaPredicted RBP13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 CDAN1Q8IWY9 1227 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 ZFPM1Q8IX07 1006 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 DHX36Q9H2U1 1008 aaKnown RBP13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 ARMT1Q9H993 441 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 HELLSQ9NRZ9 838 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 ATP8A2Q9NTI2 1148 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 TLL2Q9Y6L7 1015 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 PTPRFP10586 1907 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 THSD7BQ9C0I4 1608 aa13.68□□□□□ -0.22
CALCOCO1-208ENST00000547988 GPAA1O43292 621 aa13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 GNAT2P19087 354 aa13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 TTLL12Q14166 644 aaPredicted RBP13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 DCAF15Q66K64 600 aa13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 SH3BP5LQ7L8J4 393 aa13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 ARMC9Q7Z3E5 817 aa13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 SAPCD2Q86UD0 394 aa13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 HHIPL1Q96JK4 782 aa13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 STRBPQ96SI9 672 aaKnown RBP13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 ABT1Q9ULW3 272 aaKnown RBP13.67□□□□□ -0.22
CALCOCO1-208ENST00000547988 DDTLA6NHG4 134 aaPredicted RBP13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 UNCXA6NJT0 531 aa13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 M0R2C6 588 aa13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 IREB2P48200 963 aaKnown RBP13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 BMP2KLQ5H9B9 411 aa13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 SKAP1Q86WV1 359 aa13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 SDR42E1Q8WUS8 393 aa13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 SEC62Q99442 399 aaKnown RBP13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 DCP1AQ9NPI6 582 aaPredicted RBP13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 PI4KBQ9UBF8 816 aa13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 MKRN1Q9UHC7 482 aaKnown RBP13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 SLC4A4Q9Y6R1 1079 aa13.66□□□□□ -0.22
CALCOCO1-208ENST00000547988 A0A0D9SFI3 127 aa13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 RASSF10A6NK89 507 aa13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 HLA-DOAP06340 250 aa13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 HUNKP57058 714 aa13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 MAP3K10Q02779 954 aa13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 NMIQ13287 307 aaPredicted RBP13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 MCMDC2Q4G0Z9 681 aa13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 GIMAP6Q6P9H5 292 aa13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 FAM227BQ96M60 508 aa13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 ZNF341Q9BYN7 854 aa13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 ANGEL1Q9UNK9 670 aaKnown RBP13.65□□□□□ -0.22
CALCOCO1-208ENST00000547988 TBC1D12O60347 775 aa13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 MFAP1P55081 439 aaKnown RBP13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 PRKG1Q13976 671 aa13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 MOB2Q70IA6 237 aa13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 TTC6Q86TZ1 520 aa13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 AMOTL1Q8IY63 956 aa13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 KLRG1Q96E93 195 aa13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 MCM9Q9NXL9 1143 aa13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 HERC5Q9UII4 1024 aaKnown RBP13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 PALD1Q9ULE6 856 aa13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 RAD50Q92878 1312 aa13.64□□□□□ -0.23
CALCOCO1-208ENST00000547988 GREB1LQ9C091 1923 aaPredicted RBP13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 GSG1L2A8MUP6 293 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 PRKAB2O43741 272 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 LDLRAD1Q5T700 205 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 CWC27Q6UX04 472 aaKnown RBP13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 MIGA2Q7L4E1 593 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 METTL16Q86W50 562 aaKnown RBP13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 ANKRD13AQ8IZ07 590 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 NACAP1Q9BZK3 213 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 EHD4Q9H223 541 aa13.63□□□□□ -0.23
CALCOCO1-208ENST00000547988 ARPP21Q9UBL0 812 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms