RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 BCAMP50895 628 aa16.96■□□□□ 0.31
CCDC59-202ENST00000547758 LRRC24Q50LG9 513 aa16.96■□□□□ 0.31
CCDC59-202ENST00000547758 GPAT2Q6NUI2 795 aa16.96■□□□□ 0.31
CCDC59-202ENST00000547758 VGLL2Q8N8G2 317 aa16.96■□□□□ 0.31
CCDC59-202ENST00000547758 LRCH3Q96II8 777 aa16.96■□□□□ 0.31
CCDC59-202ENST00000547758 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
CCDC59-202ENST00000547758 DOCK1Q14185 1865 aa16.96■□□□□ 0.31
CCDC59-202ENST00000547758 MYH2Q9UKX2 1941 aa16.96■□□□□ 0.3
CCDC59-202ENST00000547758 ADCY3O60266 1144 aa16.95■□□□□ 0.3
CCDC59-202ENST00000547758 PDE8BO95263 885 aa16.95■□□□□ 0.3
CCDC59-202ENST00000547758 TCP10Q12799 353 aa16.95■□□□□ 0.3
CCDC59-202ENST00000547758 SLC4A10Q6U841 1118 aa16.95■□□□□ 0.3
CCDC59-202ENST00000547758 KIF16BQ96L93 1317 aa16.95■□□□□ 0.3
CCDC59-202ENST00000547758 CXCL11O14625 94 aa16.94■□□□□ 0.3
CCDC59-202ENST00000547758 INHAP05111 366 aa16.94■□□□□ 0.3
CCDC59-202ENST00000547758 NBPF7P0C2Y1 421 aaPredicted RBP16.94■□□□□ 0.3
CCDC59-202ENST00000547758 ELNP15502 786 aa16.94■□□□□ 0.3
CCDC59-202ENST00000547758 CAPN2P17655 700 aa16.94■□□□□ 0.3
CCDC59-202ENST00000547758 FLT3LGP49771 235 aa16.94■□□□□ 0.3
CCDC59-202ENST00000547758 PHF12Q96QT6 1004 aa16.94■□□□□ 0.3
CCDC59-202ENST00000547758 BICC1Q9H694 974 aaKnown RBP16.94■□□□□ 0.3
CCDC59-202ENST00000547758 STAP2Q9UGK3 403 aa16.94■□□□□ 0.3
CCDC59-202ENST00000547758 TFRCP02786 760 aaKnown RBP16.93■□□□□ 0.3
CCDC59-202ENST00000547758 NFIAQ12857 509 aa16.93■□□□□ 0.3
CCDC59-202ENST00000547758 RABL6Q3YEC7 729 aaPredicted RBP16.93■□□□□ 0.3
CCDC59-202ENST00000547758 PXYLP1Q8TE99 480 aa16.93■□□□□ 0.3
CCDC59-202ENST00000547758 DEFB118Q96PH6 123 aa16.93■□□□□ 0.3
CCDC59-202ENST00000547758 DAGLAQ9Y4D2 1042 aa16.93■□□□□ 0.3
CCDC59-202ENST00000547758 UTYO14607 1347 aa16.93■□□□□ 0.3
CCDC59-202ENST00000547758 CCDC184Q52MB2 194 aa16.92■□□□□ 0.3
CCDC59-202ENST00000547758 CDC42EP5Q6NZY7 148 aa16.92■□□□□ 0.3
CCDC59-202ENST00000547758 FASTKD5Q7L8L6 764 aaKnown RBP16.92■□□□□ 0.3
CCDC59-202ENST00000547758 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
CCDC59-202ENST00000547758 WDR66Q8TBY9 1149 aa16.92■□□□□ 0.3
CCDC59-202ENST00000547758 PAK6Q9NQU5 681 aaPredicted RBP16.92■□□□□ 0.3
CCDC59-202ENST00000547758 UNC80Q8N2C7 3258 aa16.91■□□□□ 0.3
CCDC59-202ENST00000547758 A0A0G2JLL6 359 aaPredicted RBP16.91■□□□□ 0.3
CCDC59-202ENST00000547758 TNPO2O14787 897 aaKnown RBP16.91■□□□□ 0.3
CCDC59-202ENST00000547758 IFIT1P09914 478 aaKnown RBP16.91■□□□□ 0.3
CCDC59-202ENST00000547758 IRF5Q13568 498 aa16.91■□□□□ 0.3
CCDC59-202ENST00000547758 PUM3Q15397 648 aaKnown RBP16.91■□□□□ 0.3
CCDC59-202ENST00000547758 PRRT2Q7Z6L0 340 aaPredicted RBP16.91■□□□□ 0.3
CCDC59-202ENST00000547758 ANKRD44Q8N8A2 993 aa16.91■□□□□ 0.3
CCDC59-202ENST00000547758 FAM198AQ9UFP1 575 aa16.91■□□□□ 0.3
CCDC59-202ENST00000547758 ATRNL1Q5VV63 1379 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 DDX60LQ5H9U9 1706 aaKnown RBP16.9■□□□□ 0.3
CCDC59-202ENST00000547758 FGFR2P21802 821 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
CCDC59-202ENST00000547758 DIXDC1Q155Q3 683 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 GADL1Q6ZQY3 521 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 SCYL3Q8IZE3 742 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 PAWRQ96IZ0 340 aaKnown RBP16.9■□□□□ 0.3
CCDC59-202ENST00000547758 CRISPLD2Q9H0B8 497 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 PICK1Q9NRD5 415 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 SLC45A1Q9Y2W3 748 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 ZHX2Q9Y6X8 837 aa16.9■□□□□ 0.3
CCDC59-202ENST00000547758 ATAD5Q96QE3 1844 aa16.89■□□□□ 0.29
CCDC59-202ENST00000547758 GPR153Q6NV75 609 aa16.89■□□□□ 0.29
CCDC59-202ENST00000547758 SMCR8Q8TEV9 937 aaPredicted RBP16.89■□□□□ 0.29
CCDC59-202ENST00000547758 TAOK2Q9UL54 1235 aa16.89■□□□□ 0.29
CCDC59-202ENST00000547758 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
CCDC59-202ENST00000547758 LOC285556D6RIA3 1793 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 PHF20L1A8MW92 1017 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 PTPRAP18433 802 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 PRDX5P30044 214 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 BMP8BP34820 402 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 NECAB2Q7Z6G3 386 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 ZFPM1Q8IX07 1006 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 DIS3LQ8TF46 1054 aaKnown RBP16.88■□□□□ 0.29
CCDC59-202ENST00000547758 GDF15Q99988 308 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 USP40Q9NVE5 1235 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
CCDC59-202ENST00000547758 SLC5A1P13866 664 aa16.87■□□□□ 0.29
CCDC59-202ENST00000547758 C7orf61Q8IZ16 206 aa16.87■□□□□ 0.29
CCDC59-202ENST00000547758 COA7Q96BR5 231 aa16.87■□□□□ 0.29
CCDC59-202ENST00000547758 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCDC59-202ENST00000547758 PLXNB2O15031 1838 aa16.86■□□□□ 0.29
CCDC59-202ENST00000547758 LDHBP07195 334 aaKnown RBP16.86■□□□□ 0.29
CCDC59-202ENST00000547758 DEFB123Q8N688 67 aa16.86■□□□□ 0.29
CCDC59-202ENST00000547758 LPIN2Q92539 896 aa16.86■□□□□ 0.29
CCDC59-202ENST00000547758 RGS3P49796 1198 aa16.85■□□□□ 0.29
CCDC59-202ENST00000547758 ANKRD13CQ8N6S4 541 aa16.85■□□□□ 0.29
CCDC59-202ENST00000547758 ANKLE1Q8NAG6 615 aa16.85■□□□□ 0.29
CCDC59-202ENST00000547758 ZMYND8Q9ULU4 1186 aaPredicted RBP16.85■□□□□ 0.29
CCDC59-202ENST00000547758 RFX7Q2KHR2 1363 aa16.85■□□□□ 0.29
CCDC59-202ENST00000547758 TRIM75PA6NK02 468 aa16.84■□□□□ 0.29
CCDC59-202ENST00000547758 ENTPD3O75355 529 aa16.84■□□□□ 0.29
CCDC59-202ENST00000547758 Q7L0L9 218 aa16.84■□□□□ 0.29
CCDC59-202ENST00000547758 IDI2Q9BXS1 227 aa16.84■□□□□ 0.29
CCDC59-202ENST00000547758 AGTPBP1Q9UPW5 1226 aa16.84■□□□□ 0.29
CCDC59-202ENST00000547758 STXBP5LQ9Y2K9 1186 aa16.84■□□□□ 0.29
CCDC59-202ENST00000547758 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
CCDC59-202ENST00000547758 SALL1Q9NSC2 1324 aa16.84■□□□□ 0.29
CCDC59-202ENST00000547758 EYA2O00167 538 aa16.83■□□□□ 0.28
CCDC59-202ENST00000547758 CTNND1O60716 968 aaKnown RBP16.83■□□□□ 0.28
CCDC59-202ENST00000547758 HMGCRP04035 888 aa16.83■□□□□ 0.28
CCDC59-202ENST00000547758 MAP3K10Q02779 954 aa16.83■□□□□ 0.28
CCDC59-202ENST00000547758 FAM110CQ1W6H9 321 aa16.83■□□□□ 0.28
CCDC59-202ENST00000547758 LRIT3Q3SXY7 679 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms