RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 BRPF3Q9ULD4 1205 aa19.57■□□□□ 0.72
CHMP1A-204ENST00000547687 ISY1Q9ULR0 285 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-204ENST00000547687 COL1A1P02452 1464 aaPredicted RBP19.57■□□□□ 0.72
CHMP1A-204ENST00000547687 ZNF532Q9HCE3 1301 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 NCLP19338 710 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 GTF2IP78347 998 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 UBE3CQ15386 1083 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 DACT2Q5SW24 774 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 CREBZFQ9NS37 354 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 SCAF8Q9UPN6 1271 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 CYP21A2P08686 494 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 MAP3K12Q12852 859 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 KIF4BQ2VIQ3 1234 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 TTLL5Q6EMB2 1281 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 TCEANC2Q96MN5 208 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 GMLQ99445 158 aa19.56■□□□□ 0.72
CHMP1A-204ENST00000547687 MYH13Q9UKX3 1938 aa19.55■□□□□ 0.72
CHMP1A-204ENST00000547687 TCRBV5S4A2TA0A5A2 114 aa19.55■□□□□ 0.72
CHMP1A-204ENST00000547687 TMEM88BA6NKF7 163 aa19.55■□□□□ 0.72
CHMP1A-204ENST00000547687 XRCC6P12956 609 aaKnown RBP eCLIP19.55■□□□□ 0.72
CHMP1A-204ENST00000547687 SYT1P21579 422 aa19.55■□□□□ 0.72
CHMP1A-204ENST00000547687 NECAB1Q8N987 351 aa19.55■□□□□ 0.72
CHMP1A-204ENST00000547687 AGBL3Q8NEM8 1001 aa19.55■□□□□ 0.72
CHMP1A-204ENST00000547687 DENND2AQ9ULE3 1009 aa19.55■□□□□ 0.72
CHMP1A-204ENST00000547687 STX6O43752 255 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 GJB2P29033 226 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 ST3GAL1Q11201 340 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 TOB2Q14106 344 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 MAGEB6Q8N7X4 407 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 LRP2BPQ9P2M1 347 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 GPAA1O43292 621 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 USP17L8P0C7I0 530 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 ZSCAN22P10073 491 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 MRE11P49959 708 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 USP48Q86UV5 1035 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 ZNF408Q9H9D4 720 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 ABCF2Q9UG63 623 aa19.54■□□□□ 0.72
CHMP1A-204ENST00000547687 SEMA3EO15041 775 aa19.53■□□□□ 0.72
CHMP1A-204ENST00000547687 STRIP1Q5VSL9 837 aa19.53■□□□□ 0.72
CHMP1A-204ENST00000547687 KIAA0825Q8IV33 1275 aa19.53■□□□□ 0.72
CHMP1A-204ENST00000547687 FOXP2O15409 715 aa19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 CST9Q5W186 159 aa19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 ZNF804AQ7Z570 1209 aa19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 GPT2Q8TD30 523 aa19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 MYOZ2Q9NPC6 264 aa19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 PGAP2Q9UHJ9 254 aa19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 ADM5C9JUS6 153 aa19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 ZNF280AP59817 542 aaPredicted RBP19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 CAVIN1Q6NZI2 390 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 GGA3Q9NZ52 723 aa19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 ABT1Q9ULW3 272 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-204ENST00000547687 F8W031 263 aaPredicted RBP19.51■□□□□ 0.71
CHMP1A-204ENST00000547687 FOXD4L6Q3SYB3 417 aaPredicted RBP19.51■□□□□ 0.71
CHMP1A-204ENST00000547687 FOXD4L3Q6VB84 417 aaPredicted RBP19.51■□□□□ 0.71
CHMP1A-204ENST00000547687 C15orf52Q6ZUT6 534 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-204ENST00000547687 GAS2L3Q86XJ1 694 aa19.51■□□□□ 0.71
CHMP1A-204ENST00000547687 CERS5Q8N5B7 392 aa19.51■□□□□ 0.71
CHMP1A-204ENST00000547687 GRPEL1Q9HAV7 217 aa19.51■□□□□ 0.71
CHMP1A-204ENST00000547687 HMGB1P09429 215 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-204ENST00000547687 ZC3H15Q8WU90 426 aaKnown RBP19.51■□□□□ 0.71
CHMP1A-204ENST00000547687 CELF2O95319 508 aaKnown RBP19.5■□□□□ 0.71
CHMP1A-204ENST00000547687 IL1R1P14778 569 aa19.5■□□□□ 0.71
CHMP1A-204ENST00000547687 NBPF9Q3BBW0 867 aa19.5■□□□□ 0.71
CHMP1A-204ENST00000547687 Q6ZUG5 572 aa19.5■□□□□ 0.71
CHMP1A-204ENST00000547687 STOX1Q6ZVD7 989 aa19.5■□□□□ 0.71
CHMP1A-204ENST00000547687 KRT26Q7Z3Y9 468 aa19.5■□□□□ 0.71
CHMP1A-204ENST00000547687 RAI14Q9P0K7 980 aa19.5■□□□□ 0.71
CHMP1A-204ENST00000547687 CHAF1AQ13111 956 aaPredicted RBP19.49■□□□□ 0.71
CHMP1A-204ENST00000547687 ANGEL2Q5VTE6 544 aaKnown RBP19.49■□□□□ 0.71
CHMP1A-204ENST00000547687 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
CHMP1A-204ENST00000547687 AIDAQ96BJ3 306 aa19.49■□□□□ 0.71
CHMP1A-204ENST00000547687 PDS5AQ29RF7 1337 aaKnown RBP19.49■□□□□ 0.71
CHMP1A-204ENST00000547687 DTNBO60941 627 aa19.49■□□□□ 0.71
CHMP1A-204ENST00000547687 F13A1P00488 732 aa19.49■□□□□ 0.71
CHMP1A-204ENST00000547687 PCDHAC2Q9Y5I4 1007 aa19.49■□□□□ 0.71
CHMP1A-204ENST00000547687 MBD3O95983 291 aa19.48■□□□□ 0.71
CHMP1A-204ENST00000547687 FGAP02671 866 aa19.48■□□□□ 0.71
CHMP1A-204ENST00000547687 GRM1Q13255 1194 aa19.48■□□□□ 0.71
CHMP1A-204ENST00000547687 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
CHMP1A-204ENST00000547687 DCPSQ96C86 337 aaKnown RBP19.48■□□□□ 0.71
CHMP1A-204ENST00000547687 STRBPQ96SI9 672 aaKnown RBP19.48■□□□□ 0.71
CHMP1A-204ENST00000547687 ATP6V1DQ9Y5K8 247 aa19.48■□□□□ 0.71
CHMP1A-204ENST00000547687 CNTNAP1P78357 1384 aa19.48■□□□□ 0.71
CHMP1A-204ENST00000547687 PDIA4P13667 645 aaKnown RBP19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 ZSCAN23Q3MJ62 389 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 OGFOD1Q8N543 542 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 TDRD7Q8NHU6 1098 aaKnown RBP19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 CTNNA3Q9UI47 895 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 MTMR6Q9Y217 621 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 ZBTB22O15209 634 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 MBD4O95243 580 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 CYP7A1P22680 504 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 VEGFBP49765 207 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 ZNF445P59923 1031 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 STK3Q13188 491 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 ADGRA1Q86SQ6 560 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 MYO3BQ8WXR4 1341 aa19.47■□□□□ 0.71
CHMP1A-204ENST00000547687 E7EWF7 191 aa19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 FGD1P98174 961 aa19.46■□□□□ 0.71
CHMP1A-204ENST00000547687 LARP1BQ659C4 914 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms