RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 TRAIPQ9BWF2 469 aa5.59□□□□□ -1.51
HCFC2-203ENST00000547194 NSUN3Q9H649 340 aaKnown RBP5.59□□□□□ -1.51
HCFC2-203ENST00000547194 PLAGL2Q9UPG8 496 aa5.59□□□□□ -1.51
HCFC2-203ENST00000547194 CTNND2Q9UQB3 1225 aa5.59□□□□□ -1.51
HCFC2-203ENST00000547194 TMEM265A0A087WTH1 108 aa5.58□□□□□ -1.52
HCFC2-203ENST00000547194 RNGTTO60942 597 aaKnown RBP5.58□□□□□ -1.52
HCFC2-203ENST00000547194 AOC2O75106 756 aa5.58□□□□□ -1.52
HCFC2-203ENST00000547194 TMEM253P0C7T8 217 aa5.58□□□□□ -1.52
HCFC2-203ENST00000547194 SERPINB4P48594 390 aa5.58□□□□□ -1.52
HCFC2-203ENST00000547194 ZNF423Q2M1K9 1284 aa5.58□□□□□ -1.52
HCFC2-203ENST00000547194 CIAPIN1Q6FI81 312 aa5.58□□□□□ -1.52
HCFC2-203ENST00000547194 GJD3Q8N144 294 aa5.58□□□□□ -1.52
HCFC2-203ENST00000547194 BHLHE41Q9C0J9 482 aaPredicted RBP5.58□□□□□ -1.52
HCFC2-203ENST00000547194 RAPGEFL1Q9UHV5 662 aa5.58□□□□□ -1.52
HCFC2-203ENST00000547194 PPP1R9AQ9ULJ8 1098 aa5.58□□□□□ -1.52
HCFC2-203ENST00000547194 H3BRB1 525 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 KRT1P04264 644 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 GLI1P08151 1106 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 OXCT1P55809 520 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 TMEM67Q5HYA8 995 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 PEAR1Q5VY43 1037 aaPredicted RBP5.57□□□□□ -1.52
HCFC2-203ENST00000547194 TXNDC2Q86VQ3 553 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 GLYCTKQ8IVS8 523 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 SNX29Q8TEQ0 813 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 RELTQ969Z4 430 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 KIRREL1Q96J84 757 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 C20orf173Q96LM9 149 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 CSRNP1Q96S65 589 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 WDR18Q9BV38 432 aa5.57□□□□□ -1.52
HCFC2-203ENST00000547194 ZC3H12CQ9C0D7 883 aaKnown RBP5.57□□□□□ -1.52
HCFC2-203ENST00000547194 TUT1Q9H6E5 874 aaKnown RBP5.57□□□□□ -1.52
HCFC2-203ENST00000547194 NUAK1O60285 661 aa5.56□□□□□ -1.52
HCFC2-203ENST00000547194 BRD1O95696 1058 aa5.56□□□□□ -1.52
HCFC2-203ENST00000547194 AFMP43652 599 aa5.56□□□□□ -1.52
HCFC2-203ENST00000547194 KCNA10Q16322 511 aa5.56□□□□□ -1.52
HCFC2-203ENST00000547194 SPRED3Q2MJR0 410 aa5.56□□□□□ -1.52
HCFC2-203ENST00000547194 ATG14Q6ZNE5 492 aa5.56□□□□□ -1.52
HCFC2-203ENST00000547194 FBXO15Q8NCQ5 510 aaPredicted RBP5.56□□□□□ -1.52
HCFC2-203ENST00000547194 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
HCFC2-203ENST00000547194 CLEC4MQ9H2X3 399 aaPredicted RBP5.56□□□□□ -1.52
HCFC2-203ENST00000547194 GSX1Q9H4S2 264 aaPredicted RBP5.56□□□□□ -1.52
HCFC2-203ENST00000547194 PITPNM2Q9BZ72 1349 aa5.55□□□□□ -1.52
HCFC2-203ENST00000547194 A0A096LPE4 126 aa5.55□□□□□ -1.52
HCFC2-203ENST00000547194 A0A1W2PPZ6 126 aa5.55□□□□□ -1.52
HCFC2-203ENST00000547194 TCAF2A6NFQ2 919 aa5.55□□□□□ -1.52
HCFC2-203ENST00000547194 LIG1P18858 919 aa5.55□□□□□ -1.52
HCFC2-203ENST00000547194 TOP6BLQ8N6T0 577 aa5.55□□□□□ -1.52
HCFC2-203ENST00000547194 TRIM56Q9BRZ2 755 aaKnown RBP5.55□□□□□ -1.52
HCFC2-203ENST00000547194 ZFYVE28Q9HCC9 887 aa5.55□□□□□ -1.52
HCFC2-203ENST00000547194 BRPF3Q9ULD4 1205 aa5.55□□□□□ -1.52
HCFC2-203ENST00000547194 AMOTL2Q9Y2J4 779 aa5.55□□□□□ -1.52
HCFC2-203ENST00000547194 HCLS1P14317 486 aaPredicted RBP5.54□□□□□ -1.52
HCFC2-203ENST00000547194 ARHGAP4P98171 946 aa5.54□□□□□ -1.52
HCFC2-203ENST00000547194 SMYD4Q8IYR2 804 aaPredicted RBP5.54□□□□□ -1.52
HCFC2-203ENST00000547194 IRF2BPLQ9H1B7 796 aa5.54□□□□□ -1.52
HCFC2-203ENST00000547194 ZFYVE1Q9HBF4 777 aa5.54□□□□□ -1.52
HCFC2-203ENST00000547194 SSU72Q9NP77 194 aaKnown RBP5.54□□□□□ -1.52
HCFC2-203ENST00000547194 TMPRSS2O15393 492 aa5.53□□□□□ -1.52
HCFC2-203ENST00000547194 NDUFB5O43674 189 aa5.53□□□□□ -1.52
HCFC2-203ENST00000547194 PDIA4P13667 645 aaKnown RBP5.53□□□□□ -1.52
HCFC2-203ENST00000547194 USPL1Q5W0Q7 1092 aa5.53□□□□□ -1.52
HCFC2-203ENST00000547194 CYFIP1Q7L576 1253 aa5.53□□□□□ -1.52
HCFC2-203ENST00000547194 AMIGO3Q86WK7 504 aa5.53□□□□□ -1.52
HCFC2-203ENST00000547194 WDR89Q96FK6 387 aaPredicted RBP5.53□□□□□ -1.52
HCFC2-203ENST00000547194 CITED4Q96RK1 184 aa5.53□□□□□ -1.52
HCFC2-203ENST00000547194 DUSP23Q9BVJ7 150 aa5.53□□□□□ -1.52
HCFC2-203ENST00000547194 EIF4EBP3O60516 100 aaPredicted RBP5.52□□□□□ -1.53
HCFC2-203ENST00000547194 NEFLP07196 543 aa5.52□□□□□ -1.53
HCFC2-203ENST00000547194 BMP7P18075 431 aa5.52□□□□□ -1.53
HCFC2-203ENST00000547194 GRIA4P48058 902 aa5.52□□□□□ -1.53
HCFC2-203ENST00000547194 PDE3BQ13370 1112 aa5.52□□□□□ -1.53
HCFC2-203ENST00000547194 TTLL4Q14679 1199 aa5.52□□□□□ -1.53
HCFC2-203ENST00000547194 ASB11Q8WXH4 323 aa5.52□□□□□ -1.53
HCFC2-203ENST00000547194 FANCD2OSQ96PS1 177 aa5.52□□□□□ -1.53
HCFC2-203ENST00000547194 ZCCHC4Q9H5U6 513 aa5.52□□□□□ -1.53
HCFC2-203ENST00000547194 DCP1AQ9NPI6 582 aaPredicted RBP5.52□□□□□ -1.53
HCFC2-203ENST00000547194 GNEQ9Y223 722 aaKnown RBP5.52□□□□□ -1.53
HCFC2-203ENST00000547194 A0A1W2PP55 124 aa5.51□□□□□ -1.53
HCFC2-203ENST00000547194 DDX54Q8TDD1 881 aaKnown RBP5.51□□□□□ -1.53
HCFC2-203ENST00000547194 FAM129BQ96TA1 746 aa5.51□□□□□ -1.53
HCFC2-203ENST00000547194 ATXN3LQ9H3M9 355 aa5.51□□□□□ -1.53
HCFC2-203ENST00000547194 LIN7BQ9HAP6 207 aa5.51□□□□□ -1.53
HCFC2-203ENST00000547194 CD320Q9NPF0 282 aa5.51□□□□□ -1.53
HCFC2-203ENST00000547194 SMG5Q9UPR3 1016 aaKnown RBP5.51□□□□□ -1.53
HCFC2-203ENST00000547194 ETV2O00321 342 aaPredicted RBP5.5□□□□□ -1.53
HCFC2-203ENST00000547194 FOXD2O60548 495 aaPredicted RBP5.5□□□□□ -1.53
HCFC2-203ENST00000547194 KCNA1Q09470 495 aa5.5□□□□□ -1.53
HCFC2-203ENST00000547194 ORC1Q13415 861 aa5.5□□□□□ -1.53
HCFC2-203ENST00000547194 GALNT12Q8IXK2 581 aa5.5□□□□□ -1.53
HCFC2-203ENST00000547194 TCF12Q99081 682 aa5.5□□□□□ -1.53
HCFC2-203ENST00000547194 EPB41L4BQ9H329 900 aa5.5□□□□□ -1.53
HCFC2-203ENST00000547194 CARS2Q9HA77 564 aaKnown RBP5.5□□□□□ -1.53
HCFC2-203ENST00000547194 MKNK2Q9HBH9 465 aa5.5□□□□□ -1.53
HCFC2-203ENST00000547194 SOWAHDA6NJG2 315 aa5.49□□□□□ -1.53
HCFC2-203ENST00000547194 ZNF157P51786 506 aaPredicted RBP5.49□□□□□ -1.53
HCFC2-203ENST00000547194 LINC00310P59036 64 aa5.49□□□□□ -1.53
HCFC2-203ENST00000547194 ID3Q02535 119 aa5.49□□□□□ -1.53
HCFC2-203ENST00000547194 DBX2Q6ZNG2 339 aa5.49□□□□□ -1.53
HCFC2-203ENST00000547194 CCNJLQ8IV13 435 aa5.49□□□□□ -1.53
HCFC2-203ENST00000547194 CCDC86Q9H6F5 360 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms