RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
R3HDM2-210ENST00000547019 ATAD5Q96QE3 1844 aa12.41□□□□□ -0.42
R3HDM2-210ENST00000547019 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 NOL9Q5SY16 702 aaKnown RBP12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 ANKLE1Q8NAG6 615 aa12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 MAFAQ8NHW3 353 aaPredicted RBP12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 CDX2Q99626 313 aaPredicted RBP12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 C11orf49Q9H6J7 331 aa12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 ATRNL1Q5VV63 1379 aa12.4□□□□□ -0.42
R3HDM2-210ENST00000547019 A0A0G2JLL6 359 aaPredicted RBP12.39□□□□□ -0.43
R3HDM2-210ENST00000547019 SLURP2P0DP57 97 aa12.39□□□□□ -0.43
R3HDM2-210ENST00000547019 DCAF15Q66K64 600 aa12.39□□□□□ -0.43
R3HDM2-210ENST00000547019 PRRT2Q7Z6L0 340 aaPredicted RBP12.39□□□□□ -0.43
R3HDM2-210ENST00000547019 SSH1Q8WYL5 1049 aa12.39□□□□□ -0.43
R3HDM2-210ENST00000547019 ZDHHC15Q96MV8 337 aa12.39□□□□□ -0.43
R3HDM2-210ENST00000547019 HIBADHP31937 336 aaKnown RBP12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 CHAF1AQ13111 956 aaPredicted RBP12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 LRRC26Q2I0M4 334 aa12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 FKBP1CQ5VVH2 108 aa12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 ANKRD13CQ8N6S4 541 aa12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 DNAAF4Q8WXU2 420 aa12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 TEKT1Q969V4 418 aa12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 OGDHLQ9ULD0 1010 aa12.38□□□□□ -0.43
R3HDM2-210ENST00000547019 HMGCRP04035 888 aa12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 COL6A1P12109 1028 aa12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 CAPN2P17655 700 aa12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 HDLBPQ00341 1268 aaKnown RBP12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 TCP10Q12799 353 aa12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 NFIAQ12857 509 aa12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 TRIB2Q92519 343 aa12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 YTHDC1Q96MU7 727 aaKnown RBP12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 PTPRCP08575 1304 aa12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
R3HDM2-210ENST00000547019 F6X3S4 739 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 CXCL11O14625 94 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 UBE4AQ14139 1066 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 ZNF697Q5TEC3 545 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 LDHAL6AQ6ZMR3 332 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 GADL1Q6ZQY3 521 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 FBXO33Q7Z6M2 555 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 CCDC84Q86UT8 332 aaPredicted RBP12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 ZFPM1Q8IX07 1006 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 MYLIPQ8WY64 445 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 TTYH1Q9H313 450 aaPredicted RBP12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 RLFQ13129 1914 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 MYH2Q9UKX2 1941 aa12.36□□□□□ -0.43
R3HDM2-210ENST00000547019 PHF20L1A8MW92 1017 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 PTPRAP18433 802 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 TREML2Q5T2D2 321 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 USP38Q8NB14 1042 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 FAM151AQ8WW52 585 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 TMOD2Q9NZR1 351 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 FAM198AQ9UFP1 575 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 GJD2Q9UKL4 321 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 AFG3L2Q9Y4W6 797 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 REV3LO60673 3130 aa12.35□□□□□ -0.43
R3HDM2-210ENST00000547019 PLA2G5P39877 138 aa12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 RARSP54136 660 aaKnown RBP12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 MAP3K21Q5TCX8 1036 aa12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 SLC4A10Q6U841 1118 aa12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 LINS1Q8NG48 757 aa12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 COA7Q96BR5 231 aa12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 HMX1Q9NP08 348 aaPredicted RBP12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 SLC45A1Q9Y2W3 748 aa12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 ZHX2Q9Y6X8 837 aa12.34□□□□□ -0.43
R3HDM2-210ENST00000547019 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.44
R3HDM2-210ENST00000547019 PEX10O60683 326 aa12.33□□□□□ -0.44
R3HDM2-210ENST00000547019 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
R3HDM2-210ENST00000547019 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
R3HDM2-210ENST00000547019 SCYL3Q8IZE3 742 aa12.33□□□□□ -0.44
R3HDM2-210ENST00000547019 SEMA6BQ9H3T3 888 aa12.33□□□□□ -0.44
R3HDM2-210ENST00000547019 DAGLAQ9Y4D2 1042 aa12.33□□□□□ -0.44
R3HDM2-210ENST00000547019 DIXDC1Q155Q3 683 aa12.32□□□□□ -0.44
R3HDM2-210ENST00000547019 C9orf50Q5SZB4 431 aa12.32□□□□□ -0.44
R3HDM2-210ENST00000547019 HHIPL2Q6UWX4 724 aa12.32□□□□□ -0.44
R3HDM2-210ENST00000547019 SH3BP5LQ7L8J4 393 aa12.32□□□□□ -0.44
R3HDM2-210ENST00000547019 FASTKD5Q7L8L6 764 aaKnown RBP12.32□□□□□ -0.44
R3HDM2-210ENST00000547019 VGLL2Q8N8G2 317 aa12.32□□□□□ -0.44
R3HDM2-210ENST00000547019 MRIQ9BWK5 157 aa12.32□□□□□ -0.44
R3HDM2-210ENST00000547019 AGTPBP1Q9UPW5 1226 aa12.32□□□□□ -0.44
R3HDM2-210ENST00000547019 TRIM75PA6NK02 468 aa12.31□□□□□ -0.44
R3HDM2-210ENST00000547019 TNFRSF10AO00220 468 aa12.31□□□□□ -0.44
R3HDM2-210ENST00000547019 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
R3HDM2-210ENST00000547019 CCDC57Q2TAC2 916 aa12.31□□□□□ -0.44
R3HDM2-210ENST00000547019 BEND3Q5T5X7 828 aa12.31□□□□□ -0.44
R3HDM2-210ENST00000547019 LHX8Q68G74 356 aa12.31□□□□□ -0.44
R3HDM2-210ENST00000547019 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
R3HDM2-210ENST00000547019 API5Q9BZZ5 524 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms