RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PIH1D3Q9NQM4 214 aaKnown RBP19.38■□□□□ 0.69
DDX54-204ENST00000546898 TRPA1O75762 1119 aa19.37■□□□□ 0.69
DDX54-204ENST00000546898 PLCG2P16885 1265 aa19.37■□□□□ 0.69
DDX54-204ENST00000546898 PICALMQ13492 652 aa19.37■□□□□ 0.69
DDX54-204ENST00000546898 TTF1Q15361 905 aaPredicted RBP19.37■□□□□ 0.69
DDX54-204ENST00000546898 OPTNQ96CV9 577 aa19.37■□□□□ 0.69
DDX54-204ENST00000546898 DCTPP1Q9H773 170 aa19.37■□□□□ 0.69
DDX54-204ENST00000546898 DDX4Q9NQI0 724 aaKnown RBP19.37■□□□□ 0.69
DDX54-204ENST00000546898 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.37■□□□□ 0.69
DDX54-204ENST00000546898 DOCK1Q14185 1865 aa19.37■□□□□ 0.69
DDX54-204ENST00000546898 IDH1O75874 414 aaKnown RBP19.36■□□□□ 0.69
DDX54-204ENST00000546898 ALDH1A1P00352 501 aa19.36■□□□□ 0.69
DDX54-204ENST00000546898 PPP4CP60510 307 aa19.36■□□□□ 0.69
DDX54-204ENST00000546898 MAP3K12Q12852 859 aa19.36■□□□□ 0.69
DDX54-204ENST00000546898 CERS3Q8IU89 383 aa19.36■□□□□ 0.69
DDX54-204ENST00000546898 ZFPM1Q8IX07 1006 aa19.36■□□□□ 0.69
DDX54-204ENST00000546898 TEX11Q8IYF3 940 aa19.36■□□□□ 0.69
DDX54-204ENST00000546898 ZNF112Q9UJU3 913 aa19.36■□□□□ 0.69
DDX54-204ENST00000546898 SNCAIPQ9Y6H5 919 aa19.36■□□□□ 0.69
DDX54-204ENST00000546898 SPDYE5A6NIY4 337 aa19.35■□□□□ 0.69
DDX54-204ENST00000546898 GJA5P36382 358 aa19.35■□□□□ 0.69
DDX54-204ENST00000546898 MIGA2Q7L4E1 593 aa19.35■□□□□ 0.69
DDX54-204ENST00000546898 ZSCAN29Q8IWY8 852 aaPredicted RBP19.35■□□□□ 0.69
DDX54-204ENST00000546898 CRBNQ96SW2 442 aa19.35■□□□□ 0.69
DDX54-204ENST00000546898 CFHR5Q9BXR6 569 aa19.35■□□□□ 0.69
DDX54-204ENST00000546898 AATFQ9NY61 560 aaKnown RBP eCLIP19.35■□□□□ 0.69
DDX54-204ENST00000546898 MYH1P12882 1939 aa19.35■□□□□ 0.69
DDX54-204ENST00000546898 SH3BP5LQ7L8J4 393 aa19.34■□□□□ 0.69
DDX54-204ENST00000546898 ADGRA1Q86SQ6 560 aa19.34■□□□□ 0.69
DDX54-204ENST00000546898 ERO1BQ86YB8 467 aa19.34■□□□□ 0.69
DDX54-204ENST00000546898 OSBPL5Q9H0X9 879 aaPredicted RBP19.34■□□□□ 0.69
DDX54-204ENST00000546898 ANTXR1Q9H6X2 564 aa19.34■□□□□ 0.69
DDX54-204ENST00000546898 PCDHB15Q9Y5E8 787 aa19.34■□□□□ 0.69
DDX54-204ENST00000546898 NDUFB9Q9Y6M9 179 aa19.34■□□□□ 0.69
DDX54-204ENST00000546898 SIPA1L1O43166 1804 aa19.34■□□□□ 0.69
DDX54-204ENST00000546898 ATAD5Q96QE3 1844 aa19.34■□□□□ 0.69
DDX54-204ENST00000546898 TESPA1A2RU30 521 aaPredicted RBP19.33■□□□□ 0.68
DDX54-204ENST00000546898 DDTLA6NHG4 134 aaPredicted RBP19.33■□□□□ 0.68
DDX54-204ENST00000546898 ATP5JP18859 108 aa19.33■□□□□ 0.68
DDX54-204ENST00000546898 CYP7A1P22680 504 aa19.33■□□□□ 0.68
DDX54-204ENST00000546898 MAP3K10Q02779 954 aa19.33■□□□□ 0.68
DDX54-204ENST00000546898 AAMPQ13685 434 aa19.33■□□□□ 0.68
DDX54-204ENST00000546898 NOL9Q5SY16 702 aaKnown RBP19.33■□□□□ 0.68
DDX54-204ENST00000546898 SH3RF3Q8TEJ3 882 aaPredicted RBP19.33■□□□□ 0.68
DDX54-204ENST00000546898 ZKSCAN4Q969J2 545 aaPredicted RBP19.33■□□□□ 0.68
DDX54-204ENST00000546898 OTUD5Q96G74 571 aa19.33■□□□□ 0.68
DDX54-204ENST00000546898 INPP5BP32019 993 aa19.32■□□□□ 0.68
DDX54-204ENST00000546898 GTF2A2P52657 109 aa19.32■□□□□ 0.68
DDX54-204ENST00000546898 PPIL2Q13356 520 aa19.32■□□□□ 0.68
DDX54-204ENST00000546898 NOM1Q5C9Z4 860 aaKnown RBP19.32■□□□□ 0.68
DDX54-204ENST00000546898 OTUD7BQ6GQQ9 843 aa19.32■□□□□ 0.68
DDX54-204ENST00000546898 IFNL1Q8IU54 200 aa19.32■□□□□ 0.68
DDX54-204ENST00000546898 MAGEB6Q8N7X4 407 aa19.32■□□□□ 0.68
DDX54-204ENST00000546898 DNAJC2Q99543 621 aaKnown RBP19.32■□□□□ 0.68
DDX54-204ENST00000546898 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
DDX54-204ENST00000546898 NAV1Q8NEY1 1877 aa19.31■□□□□ 0.68
DDX54-204ENST00000546898 PHIPQ8WWQ0 1821 aa19.31■□□□□ 0.68
DDX54-204ENST00000546898 SMARCA5O60264 1052 aaPredicted RBP19.31■□□□□ 0.68
DDX54-204ENST00000546898 TBC1D12O60347 775 aa19.31■□□□□ 0.68
DDX54-204ENST00000546898 PPATQ06203 517 aa19.31■□□□□ 0.68
DDX54-204ENST00000546898 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
DDX54-204ENST00000546898 DHX36Q9H2U1 1008 aaKnown RBP19.31■□□□□ 0.68
DDX54-204ENST00000546898 PTPRFP10586 1907 aa19.31■□□□□ 0.68
DDX54-204ENST00000546898 IGF2BP3O00425 579 aaKnown RBP eCLIP19.3■□□□□ 0.68
DDX54-204ENST00000546898 GOLIM4O00461 696 aa19.3■□□□□ 0.68
DDX54-204ENST00000546898 MS4A4AQ96JQ5 239 aa19.3■□□□□ 0.68
DDX54-204ENST00000546898 PAG1Q9NWQ8 432 aa19.3■□□□□ 0.68
DDX54-204ENST00000546898 DDX60LQ5H9U9 1706 aaKnown RBP19.3■□□□□ 0.68
DDX54-204ENST00000546898 FLT1P17948 1338 aa19.29■□□□□ 0.68
DDX54-204ENST00000546898 PHF20L1A8MW92 1017 aa19.29■□□□□ 0.68
DDX54-204ENST00000546898 GPATCH3Q96I76 525 aa19.29■□□□□ 0.68
DDX54-204ENST00000546898 HAUS7Q99871 368 aa19.29■□□□□ 0.68
DDX54-204ENST00000546898 BOLA2Q9H3K6 86 aa19.29■□□□□ 0.68
DDX54-204ENST00000546898 CCL15-CCL14A0A0B4J2E2 113 aa19.28■□□□□ 0.68
DDX54-204ENST00000546898 TBC1D8O95759 1140 aa19.28■□□□□ 0.68
DDX54-204ENST00000546898 PDE6AP16499 860 aa19.28■□□□□ 0.68
DDX54-204ENST00000546898 DYNLL1P63167 89 aaKnown RBP19.28■□□□□ 0.68
DDX54-204ENST00000546898 SNAPC2Q13487 334 aa19.28■□□□□ 0.68
DDX54-204ENST00000546898 CCL15Q16663 113 aa19.28■□□□□ 0.68
DDX54-204ENST00000546898 SCYL3Q8IZE3 742 aa19.28■□□□□ 0.68
DDX54-204ENST00000546898 TGFBRAP1Q8WUH2 860 aa19.28■□□□□ 0.68
DDX54-204ENST00000546898 ECHDC1Q9NTX5 307 aa19.28■□□□□ 0.68
DDX54-204ENST00000546898 HERC5Q9UII4 1024 aaKnown RBP19.28■□□□□ 0.68
DDX54-204ENST00000546898 IRF6O14896 467 aa19.27■□□□□ 0.68
DDX54-204ENST00000546898 CTNND1O60716 968 aaKnown RBP19.27■□□□□ 0.68
DDX54-204ENST00000546898 CETPP11597 493 aa19.27■□□□□ 0.68
DDX54-204ENST00000546898 SLC9C2Q5TAH2 1124 aa19.27■□□□□ 0.68
DDX54-204ENST00000546898 MAPKAPK5Q8IW41 473 aa19.27■□□□□ 0.68
DDX54-204ENST00000546898 MIGA1Q8NAN2 632 aa19.27■□□□□ 0.68
DDX54-204ENST00000546898 BRI3BPQ8WY22 251 aa19.27■□□□□ 0.68
DDX54-204ENST00000546898 PTPN18Q99952 460 aa19.27■□□□□ 0.68
DDX54-204ENST00000546898 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.27■□□□□ 0.68
DDX54-204ENST00000546898 PI4KBQ9UBF8 816 aa19.27■□□□□ 0.68
DDX54-204ENST00000546898 GPR25O00155 361 aa19.26■□□□□ 0.67
DDX54-204ENST00000546898 HDAC1Q13547 482 aaPredicted RBP19.26■□□□□ 0.67
DDX54-204ENST00000546898 RIOK1Q9BRS2 568 aaKnown RBP19.26■□□□□ 0.67
DDX54-204ENST00000546898 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.26■□□□□ 0.677e-7■■■□□ 15.9
DDX54-204ENST00000546898 ZCCHC17Q9NP64 241 aaKnown RBP19.26■□□□□ 0.67
DDX54-204ENST00000546898 PICK1Q9NRD5 415 aa19.26■□□□□ 0.67
DDX54-204ENST00000546898 KCNH4Q9UQ05 1017 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms