RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 CENPFP49454 3210 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 GAKO14976 1311 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 ADGRA2Q96PE1 1338 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 A0A1B0GUL7 405 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 CXCL11O14625 94 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 ENTPD3O75355 529 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 GNAI3P08754 354 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 SLURP2P0DP57 97 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 MTFR1Q15390 333 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 SPTY2D1Q68D10 685 aaPredicted RBP14.2□□□□□ -0.14
RAB5C-203ENST00000546881 SH3BP5LQ7L8J4 393 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 XAGE2Q96GT9 111 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 IDI2Q9BXS1 227 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 AKAP2Q9Y2D5 859 aa14.2□□□□□ -0.14
RAB5C-203ENST00000546881 DDTLA6NHG4 134 aaPredicted RBP14.19□□□□□ -0.14
RAB5C-203ENST00000546881 PHF20L1A8MW92 1017 aa14.19□□□□□ -0.14
RAB5C-203ENST00000546881 PTPRAP18433 802 aa14.19□□□□□ -0.14
RAB5C-203ENST00000546881 GRK4P32298 578 aa14.19□□□□□ -0.14
RAB5C-203ENST00000546881 RARSP54136 660 aaKnown RBP14.19□□□□□ -0.14
RAB5C-203ENST00000546881 FCGRTP55899 365 aa14.19□□□□□ -0.14
RAB5C-203ENST00000546881 MVPQ14764 893 aaKnown RBP14.19□□□□□ -0.14
RAB5C-203ENST00000546881 GPAT2Q6NUI2 795 aa14.19□□□□□ -0.14
RAB5C-203ENST00000546881 ERICH6Q7L0X2 663 aa14.19□□□□□ -0.14
RAB5C-203ENST00000546881 FASTKD5Q7L8L6 764 aaKnown RBP14.19□□□□□ -0.14
RAB5C-203ENST00000546881 DDX4Q9NQI0 724 aaKnown RBP14.19□□□□□ -0.14
RAB5C-203ENST00000546881 ATRNL1Q5VV63 1379 aa14.19□□□□□ -0.14
RAB5C-203ENST00000546881 MROH7-TTC4A0A0A0MT08 1334 aa14.18□□□□□ -0.14
RAB5C-203ENST00000546881 A0A0G2JLL6 359 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-203ENST00000546881 TRIM75PA6NK02 468 aa14.18□□□□□ -0.14
RAB5C-203ENST00000546881 MECOMQ03112 1051 aa14.18□□□□□ -0.14
RAB5C-203ENST00000546881 PRKCZQ05513 592 aa14.18□□□□□ -0.14
RAB5C-203ENST00000546881 PRRT2Q7Z6L0 340 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-203ENST00000546881 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-203ENST00000546881 BCRP11274 1271 aa14.17□□□□□ -0.14
RAB5C-203ENST00000546881 CCL5P13501 91 aa14.17□□□□□ -0.14
RAB5C-203ENST00000546881 UBXN2AP68543 259 aa14.17□□□□□ -0.14
RAB5C-203ENST00000546881 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-203ENST00000546881 SMCR8Q8TEV9 937 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-203ENST00000546881 DPF3Q92784 378 aa14.17□□□□□ -0.14
RAB5C-203ENST00000546881 FRAT1Q92837 279 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-203ENST00000546881 RNF208Q9H0X6 261 aa14.17□□□□□ -0.14
RAB5C-203ENST00000546881 RAI14Q9P0K7 980 aa14.17□□□□□ -0.14
RAB5C-203ENST00000546881 COLQQ9Y215 455 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-203ENST00000546881 AFG3L2Q9Y4W6 797 aa14.17□□□□□ -0.14
RAB5C-203ENST00000546881 RFX7Q2KHR2 1363 aa14.17□□□□□ -0.14
RAB5C-203ENST00000546881 BRCA2P51587 3418 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 PDS5AQ29RF7 1337 aaKnown RBP14.16□□□□□ -0.14
RAB5C-203ENST00000546881 FAM196BA6NMK8 535 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 H0YGN5 161 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 CTNND1O60716 968 aaKnown RBP14.16□□□□□ -0.14
RAB5C-203ENST00000546881 PI16Q6UXB8 463 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 TBC1D9Q6ZT07 1266 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 SPATA5Q8NB90 893 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 ARHGAP45Q92619 1136 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 SHISA4Q96DD7 197 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 FAM163AQ96GL9 167 aaPredicted RBP14.16□□□□□ -0.14
RAB5C-203ENST00000546881 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.16□□□□□ -0.14
RAB5C-203ENST00000546881 HMG20BQ9P0W2 317 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 TAOK2Q9UL54 1235 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 GABRQQ9UN88 632 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.16□□□□□ -0.14
RAB5C-203ENST00000546881 MKI67P46013 3256 aaKnown RBP14.16□□□□□ -0.14
RAB5C-203ENST00000546881 DOCK1Q14185 1865 aa14.16□□□□□ -0.14
RAB5C-203ENST00000546881 GPR75-ASB3A0A0A6YYF3 556 aa14.15□□□□□ -0.14
RAB5C-203ENST00000546881 GNAI2P04899 355 aa14.15□□□□□ -0.14
RAB5C-203ENST00000546881 LDHCP07864 332 aa14.15□□□□□ -0.14
RAB5C-203ENST00000546881 GSTO1P78417 241 aa14.15□□□□□ -0.14
RAB5C-203ENST00000546881 G3BP1Q13283 466 aaKnown RBP eCLIP14.15□□□□□ -0.143e-6■■□□□ 13.8
RAB5C-203ENST00000546881 NKX2-3Q8TAU0 364 aa14.15□□□□□ -0.14
RAB5C-203ENST00000546881 CLUAP1Q96AJ1 413 aa14.15□□□□□ -0.14
RAB5C-203ENST00000546881 TNNQ9UQP3 1299 aa14.15□□□□□ -0.14
RAB5C-203ENST00000546881 TNPO2O14787 897 aaKnown RBP14.14□□□□□ -0.15
RAB5C-203ENST00000546881 ZBTB22O15209 634 aa14.14□□□□□ -0.15
RAB5C-203ENST00000546881 IPO8O15397 1037 aaKnown RBP14.14□□□□□ -0.15
RAB5C-203ENST00000546881 ADCY3O60266 1144 aa14.14□□□□□ -0.15
RAB5C-203ENST00000546881 RHBDL3P58872 404 aa14.14□□□□□ -0.15
RAB5C-203ENST00000546881 MAP3K10Q02779 954 aa14.14□□□□□ -0.15
RAB5C-203ENST00000546881 MTX1Q13505 466 aa14.14□□□□□ -0.15
RAB5C-203ENST00000546881 SLAIN1Q8ND83 568 aa14.14□□□□□ -0.15
RAB5C-203ENST00000546881 ZNF384Q8TF68 577 aa14.14□□□□□ -0.15
RAB5C-203ENST00000546881 MGAMO43451 1857 aa14.14□□□□□ -0.15
RAB5C-203ENST00000546881 PNMA6EA0A0J9YXQ4 647 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 BCAR3O75815 825 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 GJB1P08034 283 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 TRIM27P14373 513 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 ELNP15502 786 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 GJA8P48165 433 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 FLT3LGP49771 235 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 FXR1P51114 621 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAB5C-203ENST00000546881 TREML2Q5T2D2 321 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 TEX11Q8IYF3 940 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 ANKRD13CQ8N6S4 541 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 NSUN4Q96CB9 384 aaKnown RBP14.13□□□□□ -0.15
RAB5C-203ENST00000546881 NOL10Q9BSC4 688 aaKnown RBP14.13□□□□□ -0.15
RAB5C-203ENST00000546881 UNC93B1Q9H1C4 597 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 LRP2BPQ9P2M1 347 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 AGTPBP1Q9UPW5 1226 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 SLC45A1Q9Y2W3 748 aa14.13□□□□□ -0.15
RAB5C-203ENST00000546881 SPP2Q13103 211 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms