RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 PTPRAP18433 802 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 NFIAQ12857 509 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 GADL1Q6ZQY3 521 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 SCYL3Q8IZE3 742 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 GUCD1Q96NT3 240 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 PICK1Q9NRD5 415 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 AFG3L2Q9Y4W6 797 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 TTC28Q96AY4 2481 aa11.66□□□□□ -0.54
SSH1-205ENST00000546812 ANKRD13CQ8N6S4 541 aa11.65□□□□□ -0.54
SSH1-205ENST00000546812 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
SSH1-205ENST00000546812 PRDM6Q9NQX0 595 aa11.65□□□□□ -0.54
SSH1-205ENST00000546812 C9orf78Q9NZ63 289 aaPredicted RBP11.65□□□□□ -0.54
SSH1-205ENST00000546812 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
SSH1-205ENST00000546812 OGDHLQ9ULD0 1010 aa11.65□□□□□ -0.54
SSH1-205ENST00000546812 PDE8BO95263 885 aa11.64□□□□□ -0.55
SSH1-205ENST00000546812 FAM110CQ1W6H9 321 aa11.64□□□□□ -0.55
SSH1-205ENST00000546812 METTL24Q5JXM2 366 aa11.64□□□□□ -0.55
SSH1-205ENST00000546812 ZFPM1Q8IX07 1006 aa11.64□□□□□ -0.55
SSH1-205ENST00000546812 AGTPBP1Q9UPW5 1226 aa11.64□□□□□ -0.55
SSH1-205ENST00000546812 DAGLAQ9Y4D2 1042 aa11.64□□□□□ -0.55
SSH1-205ENST00000546812 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
SSH1-205ENST00000546812 VAMP4O75379 141 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 TRIM32Q13049 653 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 LRRC24Q50LG9 513 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 MIER1Q8N108 512 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 VGLL2Q8N8G2 317 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 WDR66Q8TBY9 1149 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 KAZALD1Q96I82 304 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 USP40Q9NVE5 1235 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 GJD2Q9UKL4 321 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 ATRNL1Q5VV63 1379 aa11.63□□□□□ -0.55
SSH1-205ENST00000546812 PFASO15067 1338 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 KIF16BQ96L93 1317 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 ALDH1L1O75891 902 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 MAP3K10Q02779 954 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 DIXDC1Q155Q3 683 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 WWC1Q8IX03 1113 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 SUCLG2Q96I99 432 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 PNMA3Q9UL41 463 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 MUC3AQ02505 3323 aa11.62□□□□□ -0.55
SSH1-205ENST00000546812 IL16Q14005 1332 aa11.61□□□□□ -0.55
SSH1-205ENST00000546812 DNAH12Q6ZR08 3092 aa11.61□□□□□ -0.55
SSH1-205ENST00000546812 CTNND1O60716 968 aaKnown RBP11.61□□□□□ -0.55
SSH1-205ENST00000546812 ENTPD3O75355 529 aa11.61□□□□□ -0.55
SSH1-205ENST00000546812 IFIT1P09914 478 aaKnown RBP11.61□□□□□ -0.55
SSH1-205ENST00000546812 COL6A1P12109 1028 aa11.61□□□□□ -0.55
SSH1-205ENST00000546812 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
SSH1-205ENST00000546812 MDM2Q00987 491 aaPredicted RBP11.61□□□□□ -0.55
SSH1-205ENST00000546812 TREML2Q5T2D2 321 aa11.61□□□□□ -0.55
SSH1-205ENST00000546812 MAP3K21Q5TCX8 1036 aa11.61□□□□□ -0.55
SSH1-205ENST00000546812 FAM161BQ96MY7 647 aa11.61□□□□□ -0.55
SSH1-205ENST00000546812 IDI2Q9BXS1 227 aa11.61□□□□□ -0.55
SSH1-205ENST00000546812 LRRFIP2Q9Y608 721 aaKnown RBP11.61□□□□□ -0.55
SSH1-205ENST00000546812 ALPK3Q96L96 1907 aa11.6□□□□□ -0.55
SSH1-205ENST00000546812 CCER2I3L3R5 266 aa11.6□□□□□ -0.55
SSH1-205ENST00000546812 NBPF7P0C2Y1 421 aaPredicted RBP11.6□□□□□ -0.55
SSH1-205ENST00000546812 FGFR2P21802 821 aa11.6□□□□□ -0.55
SSH1-205ENST00000546812 RGS3P49796 1198 aa11.6□□□□□ -0.55
SSH1-205ENST00000546812 PUM3Q15397 648 aaKnown RBP11.6□□□□□ -0.55
SSH1-205ENST00000546812 RABL6Q3YEC7 729 aaPredicted RBP11.6□□□□□ -0.55
SSH1-205ENST00000546812 TRIB2Q92519 343 aa11.6□□□□□ -0.55
SSH1-205ENST00000546812 SRCIN1Q9C0H9 1055 aa11.6□□□□□ -0.55
SSH1-205ENST00000546812 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
SSH1-205ENST00000546812 MGAMO43451 1857 aa11.59□□□□□ -0.55
SSH1-205ENST00000546812 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
SSH1-205ENST00000546812 PRDX5P30044 214 aa11.59□□□□□ -0.55
SSH1-205ENST00000546812 LRRC26Q2I0M4 334 aa11.59□□□□□ -0.55
SSH1-205ENST00000546812 ZNF697Q5TEC3 545 aa11.59□□□□□ -0.55
SSH1-205ENST00000546812 SH3BP5LQ7L8J4 393 aa11.59□□□□□ -0.55
SSH1-205ENST00000546812 ZSCAN29Q8IWY8 852 aaPredicted RBP11.59□□□□□ -0.55
SSH1-205ENST00000546812 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
SSH1-205ENST00000546812 CDX2Q99626 313 aaPredicted RBP11.59□□□□□ -0.55
SSH1-205ENST00000546812 BICC1Q9H694 974 aaKnown RBP11.59□□□□□ -0.55
SSH1-205ENST00000546812 UTYO14607 1347 aa11.59□□□□□ -0.55
SSH1-205ENST00000546812 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
SSH1-205ENST00000546812 COL2A1P02458 1487 aaPredicted RBP11.58□□□□□ -0.56
SSH1-205ENST00000546812 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
SSH1-205ENST00000546812 SLURP2P0DP57 97 aa11.58□□□□□ -0.56
SSH1-205ENST00000546812 XRCC5P13010 732 aaKnown RBP11.58□□□□□ -0.56
SSH1-205ENST00000546812 CYP2B6P20813 491 aa11.58□□□□□ -0.56
SSH1-205ENST00000546812 PABPC4Q13310 644 aaKnown RBP eCLIP11.58□□□□□ -0.56
SSH1-205ENST00000546812 SLC4A10Q6U841 1118 aa11.58□□□□□ -0.56
SSH1-205ENST00000546812 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
SSH1-205ENST00000546812 ANKRD44Q8N8A2 993 aa11.58□□□□□ -0.56
SSH1-205ENST00000546812 MAFAQ8NHW3 353 aaPredicted RBP11.58□□□□□ -0.56
SSH1-205ENST00000546812 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.58□□□□□ -0.56
SSH1-205ENST00000546812 DDTLA6NHG4 134 aaPredicted RBP11.57□□□□□ -0.56
SSH1-205ENST00000546812 SLC5A1P13866 664 aa11.57□□□□□ -0.56
SSH1-205ENST00000546812 SPP2Q13103 211 aa11.57□□□□□ -0.56
SSH1-205ENST00000546812 LHX8Q68G74 356 aa11.57□□□□□ -0.56
SSH1-205ENST00000546812 KLHDC4Q8TBB5 520 aa11.57□□□□□ -0.56
SSH1-205ENST00000546812 LPIN2Q92539 896 aa11.57□□□□□ -0.56
SSH1-205ENST00000546812 SYMPKQ92797 1274 aaKnown RBP11.57□□□□□ -0.56
SSH1-205ENST00000546812 LBHD1Q9BQE6 289 aaPredicted RBP11.57□□□□□ -0.56
SSH1-205ENST00000546812 ASCC2Q9H1I8 757 aaPredicted RBP11.57□□□□□ -0.56
SSH1-205ENST00000546812 SEMA6BQ9H3T3 888 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms