RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SKOR2Q2VWA4 1001 aaPredicted RBP14.02□□□□□ -0.16
CCDC38-202ENST00000546386 MFSD14BQ5SR56 506 aa14.02□□□□□ -0.16
CCDC38-202ENST00000546386 APOA5Q6Q788 366 aa14.02□□□□□ -0.16
CCDC38-202ENST00000546386 KLHL34Q8N239 644 aa14.02□□□□□ -0.16
CCDC38-202ENST00000546386 RBM17Q96I25 401 aaKnown RBP14.02□□□□□ -0.16
CCDC38-202ENST00000546386 CD209Q9NNX6 404 aa14.02□□□□□ -0.16
CCDC38-202ENST00000546386 XDHP47989 1333 aa14.02□□□□□ -0.16
CCDC38-202ENST00000546386 CACNB3P54284 484 aa14.02□□□□□ -0.17
CCDC38-202ENST00000546386 PLCB2Q00722 1185 aa14.02□□□□□ -0.17
CCDC38-202ENST00000546386 CKAP2LQ8IYA6 745 aa14.02□□□□□ -0.17
CCDC38-202ENST00000546386 AKT1S1Q96B36 256 aa14.02□□□□□ -0.17
CCDC38-202ENST00000546386 LY9Q9HBG7 655 aa14.02□□□□□ -0.17
CCDC38-202ENST00000546386 MYH7P12883 1935 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 SPATA32Q96LK8 384 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 SLC26A6Q9BXS9 759 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 SCAF8Q9UPN6 1271 aaKnown RBP14.01□□□□□ -0.17
CCDC38-202ENST00000546386 SLC12A7Q9Y666 1083 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
CCDC38-202ENST00000546386 SH2B2O14492 632 aaPredicted RBP14.01□□□□□ -0.17
CCDC38-202ENST00000546386 PPEF1O14829 653 aaPredicted RBP14.01□□□□□ -0.17
CCDC38-202ENST00000546386 USP5P45974 858 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 PLCD1P51178 756 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 DCP1AQ9NPI6 582 aaPredicted RBP14.01□□□□□ -0.17
CCDC38-202ENST00000546386 KCNJ14Q9UNX9 436 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 PARP3Q9Y6F1 533 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 LY75O60449 1722 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 LRP5O75197 1615 aa14.01□□□□□ -0.17
CCDC38-202ENST00000546386 CCDC69A6NI79 296 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 KIF28PB7ZC32 967 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 CRY2Q49AN0 593 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 ILDR1Q86SU0 546 aaPredicted RBP14□□□□□ -0.17
CCDC38-202ENST00000546386 AGXT2Q9BYV1 514 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 CPVLQ9H3G5 476 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 SCN7AQ01118 1682 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 FSD2A1L4K1 749 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 GOLGA8AA7E2F4 631 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 G3V3G9 751 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 ZBTB43O43298 467 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 SRGNP10124 158 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 DCAF8Q5TAQ9 597 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 USP28Q96RU2 1077 aa14□□□□□ -0.17
CCDC38-202ENST00000546386 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
CCDC38-202ENST00000546386 ZNF274Q96GC6 653 aaPredicted RBP13.99□□□□□ -0.17
CCDC38-202ENST00000546386 UBAC1Q9BSL1 405 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 UBR3Q6ZT12 1888 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 TNKSO95271 1327 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 USP17L3A6NCW0 530 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 USP17L4A6NCW7 530 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 USP17L1Q7RTZ2 530 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 ZNF804AQ7Z570 1209 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 CLEC10AQ8IUN9 316 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 SMARCC2Q8TAQ2 1214 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 C8orf76Q96K31 380 aa13.99□□□□□ -0.17
CCDC38-202ENST00000546386 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
CCDC38-202ENST00000546386 GOLGA6L4A6NEF3 574 aa13.98□□□□□ -0.17
CCDC38-202ENST00000546386 PDCP20941 246 aa13.98□□□□□ -0.17
CCDC38-202ENST00000546386 EIF6P56537 245 aaKnown RBP13.98□□□□□ -0.17
CCDC38-202ENST00000546386 KRT85P78386 507 aa13.98□□□□□ -0.17
CCDC38-202ENST00000546386 RESTQ13127 1097 aa13.98□□□□□ -0.17
CCDC38-202ENST00000546386 WTAPQ15007 396 aa13.98□□□□□ -0.17
CCDC38-202ENST00000546386 NLGN1Q8N2Q7 840 aa13.98□□□□□ -0.17
CCDC38-202ENST00000546386 PGBD1Q96JS3 809 aa13.98□□□□□ -0.17
CCDC38-202ENST00000546386 ALDH8A1Q9H2A2 487 aaPredicted RBP13.98□□□□□ -0.17
CCDC38-202ENST00000546386 MARCKSP29966 332 aaPredicted RBP13.98□□□□□ -0.17
CCDC38-202ENST00000546386 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
CCDC38-202ENST00000546386 TDRD7Q8NHU6 1098 aaKnown RBP13.98□□□□□ -0.17
CCDC38-202ENST00000546386 BICD2Q8TD16 824 aa13.98□□□□□ -0.17
CCDC38-202ENST00000546386 CLIC4Q9Y696 253 aa13.98□□□□□ -0.17
CCDC38-202ENST00000546386 IRS2Q9Y4H2 1338 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 FAM196BA6NMK8 535 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 PLSCR1O15162 318 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 NR1I2O75469 434 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 BTDP43251 543 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 C2CD5Q86YS7 1000 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 ENAHQ8N8S7 591 aaPredicted RBP13.97□□□□□ -0.17
CCDC38-202ENST00000546386 LEO1Q8WVC0 666 aaPredicted RBP13.97□□□□□ -0.17
CCDC38-202ENST00000546386 ALG1Q9BT22 464 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 ZC3H12CQ9C0D7 883 aaKnown RBP13.97□□□□□ -0.17
CCDC38-202ENST00000546386 DACT1Q9NYF0 836 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 PLEKHA8P1O95397 391 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 SPECC1Q5M775 1068 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 CERS5Q8N5B7 392 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 MYH2Q9UKX2 1941 aa13.97□□□□□ -0.17
CCDC38-202ENST00000546386 C21orf2O43822 256 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 ZBTB7AO95365 584 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 TCP10Q12799 353 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 LEMD3Q9Y2U8 911 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 ATP6V1DQ9Y5K8 247 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 ERICH2A1L162 156 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 TSPY2A6NKD2 308 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 RAD21O60216 631 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 NASPP49321 788 aaPredicted RBP13.96□□□□□ -0.17
CCDC38-202ENST00000546386 CRNKL1Q9BZJ0 848 aaKnown RBP13.96□□□□□ -0.17
CCDC38-202ENST00000546386 MRVI1Q9Y6F6 885 aa13.96□□□□□ -0.17
CCDC38-202ENST00000546386 ME1P48163 572 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 RBM5P52756 815 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC38-202ENST00000546386 GNL2Q13823 731 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms