RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 SUPT20HL1Q3ZLR7 823 aa25.03■■□□□ 1.6
SCARB1-211ENST00000546215 SH3BP5LQ7L8J4 393 aa25.03■■□□□ 1.6
SCARB1-211ENST00000546215 AIDAQ96BJ3 306 aa25.03■■□□□ 1.6
SCARB1-211ENST00000546215 SEC62Q99442 399 aaKnown RBP25.03■■□□□ 1.6
SCARB1-211ENST00000546215 OSBPL5Q9H0X9 879 aaPredicted RBP25.03■■□□□ 1.6
SCARB1-211ENST00000546215 FLT1P17948 1338 aa25.03■■□□□ 1.6
SCARB1-211ENST00000546215 SSC5DA1L4H1 1573 aa25.03■■□□□ 1.6
SCARB1-211ENST00000546215 M0R2C6 588 aa25.02■■□□□ 1.6
SCARB1-211ENST00000546215 MAPKAPK5Q8IW41 473 aa25.02■■□□□ 1.6
SCARB1-211ENST00000546215 CRNKL1Q9BZJ0 848 aaKnown RBP25.02■■□□□ 1.6
SCARB1-211ENST00000546215 NF2P35240 595 aa25.01■■□□□ 1.59
SCARB1-211ENST00000546215 STRBPQ96SI9 672 aaKnown RBP25.01■■□□□ 1.59
SCARB1-211ENST00000546215 GBA2Q9HCG7 927 aaPredicted RBP25.01■■□□□ 1.59
SCARB1-211ENST00000546215 MKRN1Q9UHC7 482 aaKnown RBP25.01■■□□□ 1.59
SCARB1-211ENST00000546215 DDTLA6NHG4 134 aaPredicted RBP25.01■■□□□ 1.59
SCARB1-211ENST00000546215 USP5P45974 858 aa25.01■■□□□ 1.59
SCARB1-211ENST00000546215 CREBZFQ9NS37 354 aa25.01■■□□□ 1.59
SCARB1-211ENST00000546215 ATRNL1Q5VV63 1379 aa25■■□□□ 1.59
SCARB1-211ENST00000546215 GPAA1O43292 621 aa25■■□□□ 1.59
SCARB1-211ENST00000546215 PRKAB2O43741 272 aa25■■□□□ 1.59
SCARB1-211ENST00000546215 SDR42E1Q8WUS8 393 aa25■■□□□ 1.59
SCARB1-211ENST00000546215 FAM227BQ96M60 508 aa25■■□□□ 1.59
SCARB1-211ENST00000546215 COL2A1P02458 1487 aaPredicted RBP25■■□□□ 1.59
SCARB1-211ENST00000546215 ZSCAN29Q8IWY8 852 aaPredicted RBP24.99■■□□□ 1.59
SCARB1-211ENST00000546215 C2orf69Q8N8R5 385 aa24.99■■□□□ 1.59
SCARB1-211ENST00000546215 HELLSQ9NRZ9 838 aa24.99■■□□□ 1.59
SCARB1-211ENST00000546215 FZD1Q9UP38 647 aa24.99■■□□□ 1.59
SCARB1-211ENST00000546215 A0A0D9SFI3 127 aa24.98■■□□□ 1.59
SCARB1-211ENST00000546215 FKBP1BP68106 108 aa24.98■■□□□ 1.59
SCARB1-211ENST00000546215 NMIQ13287 307 aaPredicted RBP24.98■■□□□ 1.59
SCARB1-211ENST00000546215 CSRNP1Q96S65 589 aa24.98■■□□□ 1.59
SCARB1-211ENST00000546215 CEP350Q5VT06 3117 aa24.98■■□□□ 1.59
SCARB1-211ENST00000546215 HIP1O00291 1037 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 PRKG1Q13976 671 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 BMP2KLQ5H9B9 411 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 MOB2Q70IA6 237 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 SAPCD2Q86UD0 394 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 DCP1AQ9NPI6 582 aaPredicted RBP24.97■■□□□ 1.59
SCARB1-211ENST00000546215 SLC4A4Q9Y6R1 1079 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 PAPPA2Q9BXP8 1791 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 PPP1R12BO60237 982 aaPredicted RBP24.97■■□□□ 1.59
SCARB1-211ENST00000546215 HTRA3P83110 453 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 MCMDC2Q4G0Z9 681 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 HOOK2Q96ED9 719 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 DHX36Q9H2U1 1008 aaKnown RBP24.97■■□□□ 1.59
SCARB1-211ENST00000546215 ATP8A2Q9NTI2 1148 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 PALD1Q9ULE6 856 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 TLL2Q9Y6L7 1015 aa24.97■■□□□ 1.59
SCARB1-211ENST00000546215 MYH1P12882 1939 aa24.96■■□□□ 1.59
SCARB1-211ENST00000546215 USP2O75604 605 aaPredicted RBP24.96■■□□□ 1.59
SCARB1-211ENST00000546215 MAP3K11Q16584 847 aa24.96■■□□□ 1.59
SCARB1-211ENST00000546215 CCDC129Q6ZRS4 1044 aa24.96■■□□□ 1.59
SCARB1-211ENST00000546215 SAP30BPQ9UHR5 308 aaKnown RBP24.96■■□□□ 1.59
SCARB1-211ENST00000546215 GNAT2P19087 354 aa24.95■■□□□ 1.58
SCARB1-211ENST00000546215 MAP3K10Q02779 954 aa24.95■■□□□ 1.58
SCARB1-211ENST00000546215 TTLL12Q14166 644 aaPredicted RBP24.95■■□□□ 1.58
SCARB1-211ENST00000546215 MIGA2Q7L4E1 593 aa24.95■■□□□ 1.58
SCARB1-211ENST00000546215 DIAPH3Q9NSV4 1193 aa24.95■■□□□ 1.58
SCARB1-211ENST00000546215 ANGEL1Q9UNK9 670 aaKnown RBP24.95■■□□□ 1.58
SCARB1-211ENST00000546215 GSG1L2A8MUP6 293 aa24.94■■□□□ 1.58
SCARB1-211ENST00000546215 CWC27Q6UX04 472 aaKnown RBP24.94■■□□□ 1.58
SCARB1-211ENST00000546215 ARMC9Q7Z3E5 817 aa24.94■■□□□ 1.58
SCARB1-211ENST00000546215 ABT1Q9ULW3 272 aaKnown RBP24.94■■□□□ 1.58
SCARB1-211ENST00000546215 UBE2Q2LH0YL09 131 aa24.93■■□□□ 1.58
SCARB1-211ENST00000546215 SLURP2P0DP57 97 aa24.93■■□□□ 1.58
SCARB1-211ENST00000546215 DCAF15Q66K64 600 aa24.93■■□□□ 1.58
SCARB1-211ENST00000546215 MCM9Q9NXL9 1143 aa24.93■■□□□ 1.58
SCARB1-211ENST00000546215 PI4KBQ9UBF8 816 aa24.93■■□□□ 1.58
SCARB1-211ENST00000546215 DDX60LQ5H9U9 1706 aaKnown RBP24.93■■□□□ 1.58
SCARB1-211ENST00000546215 NAV1Q8NEY1 1877 aa24.93■■□□□ 1.58
SCARB1-211ENST00000546215 PATL2C9JE40 543 aaKnown RBP24.93■■□□□ 1.58
SCARB1-211ENST00000546215 CHMLP26374 656 aa24.93■■□□□ 1.58
SCARB1-211ENST00000546215 HUNKP57058 714 aa24.93■■□□□ 1.58
SCARB1-211ENST00000546215 ZNF589Q86UQ0 364 aaPredicted RBP24.93■■□□□ 1.58
SCARB1-211ENST00000546215 BAZ2AQ9UIF9 1905 aaKnown RBP24.92■■□□□ 1.58
SCARB1-211ENST00000546215 SIPA1L1O43166 1804 aa24.92■■□□□ 1.58
SCARB1-211ENST00000546215 TBC1D12O60347 775 aa24.92■■□□□ 1.58
SCARB1-211ENST00000546215 SLC4A8Q2Y0W8 1093 aa24.92■■□□□ 1.58
SCARB1-211ENST00000546215 LDLRAD1Q5T700 205 aa24.92■■□□□ 1.58
SCARB1-211ENST00000546215 GIMAP6Q6P9H5 292 aa24.92■■□□□ 1.58
SCARB1-211ENST00000546215 KLRG1Q96E93 195 aa24.92■■□□□ 1.58
SCARB1-211ENST00000546215 FOXP2O15409 715 aa24.91■■□□□ 1.58
SCARB1-211ENST00000546215 IREB2P48200 963 aaKnown RBP24.91■■□□□ 1.58
SCARB1-211ENST00000546215 METTL16Q86W50 562 aaKnown RBP24.91■■□□□ 1.58
SCARB1-211ENST00000546215 HHIPL1Q96JK4 782 aa24.91■■□□□ 1.58
SCARB1-211ENST00000546215 ZNF341Q9BYN7 854 aa24.91■■□□□ 1.58
SCARB1-211ENST00000546215 EPB41L4AQ9HCS5 686 aaPredicted RBP24.91■■□□□ 1.58
SCARB1-211ENST00000546215 RASSF10A6NK89 507 aa24.9■■□□□ 1.58
SCARB1-211ENST00000546215 HLA-DOAP06340 250 aa24.9■■□□□ 1.58
SCARB1-211ENST00000546215 PLCD1P51178 756 aa24.9■■□□□ 1.58
SCARB1-211ENST00000546215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.9■■□□□ 1.58
SCARB1-211ENST00000546215 DDRGK1Q96HY6 314 aa24.9■■□□□ 1.58
SCARB1-211ENST00000546215 ZNF112Q9UJU3 913 aa24.9■■□□□ 1.58
SCARB1-211ENST00000546215 CCDC171Q6TFL3 1326 aa24.9■■□□□ 1.58
SCARB1-211ENST00000546215 POLR3DP05423 398 aaPredicted RBP24.89■■□□□ 1.58
SCARB1-211ENST00000546215 VPS53Q5VIR6 699 aa24.89■■□□□ 1.58
SCARB1-211ENST00000546215 TTC6Q86TZ1 520 aa24.89■■□□□ 1.58
SCARB1-211ENST00000546215 FOXP4Q8IVH2 680 aaPredicted RBP24.89■■□□□ 1.58
SCARB1-211ENST00000546215 IFNL3Q8IZI9 196 aa24.89■■□□□ 1.58
SCARB1-211ENST00000546215 IL25Q9H293 177 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms