RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PAPPA2Q9BXP8 1791 aa24.69■■□□□ 1.54
HMGA2-211ENST00000545998 PCNTO95613 3336 aa24.68■■□□□ 1.54
HMGA2-211ENST00000545998 MBD4O95243 580 aa24.68■■□□□ 1.54
HMGA2-211ENST00000545998 NF2P35240 595 aa24.68■■□□□ 1.54
HMGA2-211ENST00000545998 ARMT1Q9H993 441 aa24.68■■□□□ 1.54
HMGA2-211ENST00000545998 GBA2Q9HCG7 927 aaPredicted RBP24.68■■□□□ 1.54
HMGA2-211ENST00000545998 FLT1P17948 1338 aa24.68■■□□□ 1.54
HMGA2-211ENST00000545998 MYH1P12882 1939 aa24.67■■□□□ 1.54
HMGA2-211ENST00000545998 SH3BP5LQ7L8J4 393 aa24.67■■□□□ 1.54
HMGA2-211ENST00000545998 OSBPL5Q9H0X9 879 aaPredicted RBP24.67■■□□□ 1.54
HMGA2-211ENST00000545998 COL2A1P02458 1487 aaPredicted RBP24.67■■□□□ 1.54
HMGA2-211ENST00000545998 ZMYM1Q5SVZ6 1142 aa24.67■■□□□ 1.54
HMGA2-211ENST00000545998 MAPKAPK5Q8IW41 473 aa24.67■■□□□ 1.54
HMGA2-211ENST00000545998 AIDAQ96BJ3 306 aa24.67■■□□□ 1.54
HMGA2-211ENST00000545998 CRNKL1Q9BZJ0 848 aaKnown RBP24.67■■□□□ 1.54
HMGA2-211ENST00000545998 ATRNL1Q5VV63 1379 aa24.66■■□□□ 1.54
HMGA2-211ENST00000545998 DDTLA6NHG4 134 aaPredicted RBP24.66■■□□□ 1.54
HMGA2-211ENST00000545998 SDSP20132 328 aa24.66■■□□□ 1.54
HMGA2-211ENST00000545998 FKBP1BP68106 108 aa24.66■■□□□ 1.54
HMGA2-211ENST00000545998 HTRA3P83110 453 aa24.66■■□□□ 1.54
HMGA2-211ENST00000545998 C2orf69Q8N8R5 385 aa24.66■■□□□ 1.54
HMGA2-211ENST00000545998 NAV1Q8NEY1 1877 aa24.66■■□□□ 1.54
HMGA2-211ENST00000545998 M0R2C6 588 aa24.65■■□□□ 1.54
HMGA2-211ENST00000545998 USP5P45974 858 aa24.65■■□□□ 1.54
HMGA2-211ENST00000545998 SAPCD2Q86UD0 394 aa24.65■■□□□ 1.54
HMGA2-211ENST00000545998 TLL2Q9Y6L7 1015 aa24.65■■□□□ 1.54
HMGA2-211ENST00000545998 DDX60LQ5H9U9 1706 aaKnown RBP24.65■■□□□ 1.54
HMGA2-211ENST00000545998 STRBPQ96SI9 672 aaKnown RBP24.64■■□□□ 1.54
HMGA2-211ENST00000545998 SEC62Q99442 399 aaKnown RBP24.64■■□□□ 1.54
HMGA2-211ENST00000545998 MKRN1Q9UHC7 482 aaKnown RBP24.64■■□□□ 1.54
HMGA2-211ENST00000545998 FZD1Q9UP38 647 aa24.64■■□□□ 1.54
HMGA2-211ENST00000545998 PRKG1Q13976 671 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 MOB2Q70IA6 237 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 ZSCAN29Q8IWY8 852 aaPredicted RBP24.63■■□□□ 1.53
HMGA2-211ENST00000545998 HOOK2Q96ED9 719 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 CSRNP1Q96S65 589 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 ABT1Q9ULW3 272 aaKnown RBP24.63■■□□□ 1.53
HMGA2-211ENST00000545998 SIPA1L1O43166 1804 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 GPAA1O43292 621 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 PRKAB2O43741 272 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 PPP1R12BO60237 982 aaPredicted RBP24.63■■□□□ 1.53
HMGA2-211ENST00000545998 MAP3K11Q16584 847 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 SDR42E1Q8WUS8 393 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 FAM227BQ96M60 508 aa24.63■■□□□ 1.53
HMGA2-211ENST00000545998 BAZ2AQ9UIF9 1905 aaKnown RBP24.62■■□□□ 1.53
HMGA2-211ENST00000545998 USP2O75604 605 aaPredicted RBP24.62■■□□□ 1.53
HMGA2-211ENST00000545998 TTLL12Q14166 644 aaPredicted RBP24.62■■□□□ 1.53
HMGA2-211ENST00000545998 ARMC9Q7Z3E5 817 aa24.62■■□□□ 1.53
HMGA2-211ENST00000545998 DHX36Q9H2U1 1008 aaKnown RBP24.62■■□□□ 1.53
HMGA2-211ENST00000545998 HELLSQ9NRZ9 838 aa24.62■■□□□ 1.53
HMGA2-211ENST00000545998 HUNKP57058 714 aa24.61■■□□□ 1.53
HMGA2-211ENST00000545998 DCP1AQ9NPI6 582 aaPredicted RBP24.61■■□□□ 1.53
HMGA2-211ENST00000545998 SAP30BPQ9UHR5 308 aaKnown RBP24.61■■□□□ 1.53
HMGA2-211ENST00000545998 ANGEL1Q9UNK9 670 aaKnown RBP24.61■■□□□ 1.53
HMGA2-211ENST00000545998 SLC4A4Q9Y6R1 1079 aa24.61■■□□□ 1.53
HMGA2-211ENST00000545998 OTOFQ9HC10 1997 aa24.61■■□□□ 1.53
HMGA2-211ENST00000545998 A0A0D9SFI3 127 aa24.6■■□□□ 1.53
HMGA2-211ENST00000545998 NMIQ13287 307 aaPredicted RBP24.6■■□□□ 1.53
HMGA2-211ENST00000545998 DCAF15Q66K64 600 aa24.6■■□□□ 1.53
HMGA2-211ENST00000545998 MIGA2Q7L4E1 593 aa24.6■■□□□ 1.53
HMGA2-211ENST00000545998 ATP8A2Q9NTI2 1148 aa24.6■■□□□ 1.53
HMGA2-211ENST00000545998 PALD1Q9ULE6 856 aa24.6■■□□□ 1.53
HMGA2-211ENST00000545998 UBE2Q2LH0YL09 131 aa24.59■■□□□ 1.53
HMGA2-211ENST00000545998 HIP1O00291 1037 aa24.59■■□□□ 1.53
HMGA2-211ENST00000545998 MAP3K10Q02779 954 aa24.59■■□□□ 1.53
HMGA2-211ENST00000545998 HHIPL1Q96JK4 782 aa24.59■■□□□ 1.53
HMGA2-211ENST00000545998 RASSF10A6NK89 507 aa24.59■■□□□ 1.53
HMGA2-211ENST00000545998 GNAT2P19087 354 aa24.59■■□□□ 1.53
HMGA2-211ENST00000545998 IREB2P48200 963 aaKnown RBP24.59■■□□□ 1.53
HMGA2-211ENST00000545998 MCMDC2Q4G0Z9 681 aa24.59■■□□□ 1.53
HMGA2-211ENST00000545998 LDLRAD1Q5T700 205 aa24.59■■□□□ 1.53
HMGA2-211ENST00000545998 CCDC129Q6ZRS4 1044 aa24.59■■□□□ 1.53
HMGA2-211ENST00000545998 GSG1L2A8MUP6 293 aa24.58■■□□□ 1.52
HMGA2-211ENST00000545998 BMP2KLQ5H9B9 411 aa24.58■■□□□ 1.52
HMGA2-211ENST00000545998 KLRG1Q96E93 195 aa24.58■■□□□ 1.52
HMGA2-211ENST00000545998 DIAPH3Q9NSV4 1193 aa24.58■■□□□ 1.52
HMGA2-211ENST00000545998 PI4KBQ9UBF8 816 aa24.58■■□□□ 1.52
HMGA2-211ENST00000545998 TBC1D12O60347 775 aa24.57■■□□□ 1.52
HMGA2-211ENST00000545998 SLURP2P0DP57 97 aa24.57■■□□□ 1.52
HMGA2-211ENST00000545998 DEFB115Q30KQ5 88 aa24.57■■□□□ 1.52
HMGA2-211ENST00000545998 ZNF341Q9BYN7 854 aa24.57■■□□□ 1.52
HMGA2-211ENST00000545998 MCM9Q9NXL9 1143 aa24.57■■□□□ 1.52
HMGA2-211ENST00000545998 METTL16Q86W50 562 aaKnown RBP24.56■■□□□ 1.52
HMGA2-211ENST00000545998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.56■■□□□ 1.52
HMGA2-211ENST00000545998 UNCXA6NJT0 531 aa24.55■■□□□ 1.52
HMGA2-211ENST00000545998 PATL2C9JE40 543 aaKnown RBP24.55■■□□□ 1.52
HMGA2-211ENST00000545998 HLA-DOAP06340 250 aa24.55■■□□□ 1.52
HMGA2-211ENST00000545998 SLC4A8Q2Y0W8 1093 aa24.55■■□□□ 1.52
HMGA2-211ENST00000545998 GIMAP6Q6P9H5 292 aa24.55■■□□□ 1.52
HMGA2-211ENST00000545998 CWC27Q6UX04 472 aaKnown RBP24.55■■□□□ 1.52
HMGA2-211ENST00000545998 ZNF112Q9UJU3 913 aa24.55■■□□□ 1.52
HMGA2-211ENST00000545998 ZNF589Q86UQ0 364 aaPredicted RBP24.54■■□□□ 1.52
HMGA2-211ENST00000545998 DDRGK1Q96HY6 314 aa24.54■■□□□ 1.52
HMGA2-211ENST00000545998 WRNIP1Q96S55 665 aa24.54■■□□□ 1.52
HMGA2-211ENST00000545998 EPB41L4AQ9HCS5 686 aaPredicted RBP24.54■■□□□ 1.52
HMGA2-211ENST00000545998 HERC5Q9UII4 1024 aaKnown RBP24.54■■□□□ 1.52
HMGA2-211ENST00000545998 PHF20L1A8MW92 1017 aa24.54■■□□□ 1.52
HMGA2-211ENST00000545998 POLR3DP05423 398 aaPredicted RBP24.54■■□□□ 1.52
HMGA2-211ENST00000545998 CHMLP26374 656 aa24.54■■□□□ 1.52
HMGA2-211ENST00000545998 PLCD1P51178 756 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms