RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 RAI14Q9P0K7 980 aa27.95■■■□□ 2.07
CHD4-214ENST00000545942 ATRNL1Q5VV63 1379 aa27.95■■■□□ 2.06
CHD4-214ENST00000545942 BTBD19C9JJ37 291 aa27.94■■■□□ 2.06
CHD4-214ENST00000545942 CCDC158Q5M9N0 1113 aa27.94■■■□□ 2.06
CHD4-214ENST00000545942 DDX4Q9NQI0 724 aaKnown RBP27.94■■■□□ 2.06
CHD4-214ENST00000545942 NOP58Q9Y2X3 529 aaKnown RBP27.94■■■□□ 2.06
CHD4-214ENST00000545942 PICALMQ13492 652 aa27.93■■■□□ 2.06
CHD4-214ENST00000545942 TTC39AQ5SRH9 613 aa27.93■■■□□ 2.06
CHD4-214ENST00000545942 SH3BP5LQ7L8J4 393 aa27.93■■■□□ 2.06
CHD4-214ENST00000545942 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.93■■■□□ 2.06
CHD4-214ENST00000545942 LRP2BPQ9P2M1 347 aa27.93■■■□□ 2.06
CHD4-214ENST00000545942 RHBDL3P58872 404 aa27.92■■■□□ 2.06
CHD4-214ENST00000545942 DBNDD2Q9BQY9 259 aa27.92■■■□□ 2.06
CHD4-214ENST00000545942 EFCC1Q9HA90 598 aa27.92■■■□□ 2.06
CHD4-214ENST00000545942 KCNH4Q9UQ05 1017 aa27.92■■■□□ 2.06
CHD4-214ENST00000545942 DDTLA6NHG4 134 aaPredicted RBP27.92■■■□□ 2.06
CHD4-214ENST00000545942 MAP4K4O95819 1239 aaPredicted RBP27.92■■■□□ 2.06
CHD4-214ENST00000545942 PANK1Q8TE04 598 aa27.92■■■□□ 2.06
CHD4-214ENST00000545942 AK9Q5TCS8 1911 aa27.91■■■□□ 2.06
CHD4-214ENST00000545942 PHF20L1A8MW92 1017 aa27.91■■■□□ 2.06
CHD4-214ENST00000545942 TLR2O60603 784 aa27.91■■■□□ 2.06
CHD4-214ENST00000545942 NPM3O75607 178 aaKnown RBP27.91■■■□□ 2.06
CHD4-214ENST00000545942 MAP3K10Q02779 954 aa27.91■■■□□ 2.06
CHD4-214ENST00000545942 CEP85Q6P2H3 762 aa27.91■■■□□ 2.06
CHD4-214ENST00000545942 PTPN22Q9Y2R2 807 aa27.91■■■□□ 2.06
CHD4-214ENST00000545942 MS4A1P11836 297 aa27.9■■■□□ 2.06
CHD4-214ENST00000545942 ARHGEF6Q15052 776 aa27.9■■■□□ 2.06
CHD4-214ENST00000545942 SNRKQ9NRH2 765 aa27.9■■■□□ 2.06
CHD4-214ENST00000545942 SCYL3Q8IZE3 742 aa27.89■■■□□ 2.05
CHD4-214ENST00000545942 ZNF512BQ96KM6 892 aaPredicted RBP27.89■■■□□ 2.05
CHD4-214ENST00000545942 PICK1Q9NRD5 415 aa27.89■■■□□ 2.05
CHD4-214ENST00000545942 CAP1Q01518 475 aa27.88■■■□□ 2.05
CHD4-214ENST00000545942 ANKRD23Q86SG2 305 aa27.88■■■□□ 2.05
CHD4-214ENST00000545942 DOCK2Q92608 1830 aa27.87■■■□□ 2.05
CHD4-214ENST00000545942 DBNLQ9UJU6 430 aaKnown RBP27.87■■■□□ 2.05
CHD4-214ENST00000545942 CXCL11O14625 94 aa27.86■■■□□ 2.05
CHD4-214ENST00000545942 CTNND1O60716 968 aaKnown RBP27.86■■■□□ 2.05
CHD4-214ENST00000545942 PTPRAP18433 802 aa27.86■■■□□ 2.05
CHD4-214ENST00000545942 NAA16Q6N069 864 aaPredicted RBP27.86■■■□□ 2.05
CHD4-214ENST00000545942 NOL10Q9BSC4 688 aaKnown RBP27.86■■■□□ 2.05
CHD4-214ENST00000545942 PDHXO00330 501 aa27.85■■■□□ 2.05
CHD4-214ENST00000545942 TBC1D12O60347 775 aa27.85■■■□□ 2.05
CHD4-214ENST00000545942 CYP2E1P05181 493 aaPredicted RBP27.85■■■□□ 2.05
CHD4-214ENST00000545942 MOGSQ13724 837 aa27.85■■■□□ 2.05
CHD4-214ENST00000545942 EAF2Q96CJ1 260 aaPredicted RBP27.85■■■□□ 2.05
CHD4-214ENST00000545942 TLR7Q9NYK1 1049 aaKnown RBP27.85■■■□□ 2.05
CHD4-214ENST00000545942 ZHX2Q9Y6X8 837 aa27.85■■■□□ 2.05
CHD4-214ENST00000545942 HTTP42858 3142 aa27.84■■■□□ 2.05
CHD4-214ENST00000545942 IGSF3O75054 1194 aa27.84■■■□□ 2.05
CHD4-214ENST00000545942 SLURP2P0DP57 97 aa27.84■■■□□ 2.05
CHD4-214ENST00000545942 ERC1Q8IUD2 1116 aa27.84■■■□□ 2.05
CHD4-214ENST00000545942 TEX11Q8IYF3 940 aa27.84■■■□□ 2.05
CHD4-214ENST00000545942 CCDC8Q9H0W5 538 aaPredicted RBP27.84■■■□□ 2.05
CHD4-214ENST00000545942 OSBPL5Q9H0X9 879 aaPredicted RBP27.84■■■□□ 2.05
CHD4-214ENST00000545942 COL2A1P02458 1487 aaPredicted RBP27.83■■■□□ 2.05
CHD4-214ENST00000545942 BAG3O95817 575 aa27.83■■■□□ 2.05
CHD4-214ENST00000545942 ZAP70P43403 619 aa27.83■■■□□ 2.05
CHD4-214ENST00000545942 KIF22Q14807 665 aa27.83■■■□□ 2.05
CHD4-214ENST00000545942 PLCG2P16885 1265 aa27.82■■■□□ 2.04
CHD4-214ENST00000545942 LACTBP83111 547 aaPredicted RBP27.82■■■□□ 2.04
CHD4-214ENST00000545942 SH3RF3Q8TEJ3 882 aaPredicted RBP27.82■■■□□ 2.04
CHD4-214ENST00000545942 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.82■■■□□ 2.04
CHD4-214ENST00000545942 EXOC6BQ9Y2D4 811 aa27.82■■■□□ 2.04
CHD4-214ENST00000545942 HSP90AB4PQ58FF6 505 aa27.81■■■□□ 2.04
CHD4-214ENST00000545942 C17orf99Q6UX52 265 aa27.81■■■□□ 2.04
CHD4-214ENST00000545942 AATFQ9NY61 560 aaKnown RBP eCLIP27.81■■■□□ 2.04
CHD4-214ENST00000545942 AFG3L2Q9Y4W6 797 aa27.81■■■□□ 2.04
CHD4-214ENST00000545942 A0A0G2JLL6 359 aaPredicted RBP27.8■■■□□ 2.04
CHD4-214ENST00000545942 PPP4CP60510 307 aa27.8■■■□□ 2.04
CHD4-214ENST00000545942 FASTKD5Q7L8L6 764 aaKnown RBP27.8■■■□□ 2.04
CHD4-214ENST00000545942 PRRT2Q7Z6L0 340 aaPredicted RBP27.8■■■□□ 2.04
CHD4-214ENST00000545942 ARMC5Q96C12 935 aa27.8■■■□□ 2.04
CHD4-214ENST00000545942 CPA4Q9UI42 421 aa27.8■■■□□ 2.04
CHD4-214ENST00000545942 DDX19BQ9UMR2 479 aa27.8■■■□□ 2.04
CHD4-214ENST00000545942 GPAT2Q6NUI2 795 aa27.79■■■□□ 2.04
CHD4-214ENST00000545942 PARK7Q99497 189 aaKnown RBP27.79■■■□□ 2.04
CHD4-214ENST00000545942 ARHGAP39Q9C0H5 1083 aa27.79■■■□□ 2.04
CHD4-214ENST00000545942 PIH1D3Q9NQM4 214 aaKnown RBP27.79■■■□□ 2.04
CHD4-214ENST00000545942 FAM196BA6NMK8 535 aa27.78■■■□□ 2.04
CHD4-214ENST00000545942 GNRH1P01148 92 aa27.78■■■□□ 2.04
CHD4-214ENST00000545942 ADGRA1Q86SQ6 560 aa27.78■■■□□ 2.04
CHD4-214ENST00000545942 AACSQ86V21 672 aa27.78■■■□□ 2.04
CHD4-214ENST00000545942 RCAN3Q9UKA8 241 aa27.78■■■□□ 2.04
CHD4-214ENST00000545942 COG6Q9Y2V7 657 aa27.78■■■□□ 2.04
CHD4-214ENST00000545942 PTCH2Q9Y6C5 1203 aa27.78■■■□□ 2.04
CHD4-214ENST00000545942 MAST2Q6P0Q8 1798 aa27.78■■■□□ 2.04
CHD4-214ENST00000545942 ADGRA2Q96PE1 1338 aa27.78■■■□□ 2.04
CHD4-214ENST00000545942 RPAP2Q8IXW5 612 aaPredicted RBP27.77■■■□□ 2.04
CHD4-214ENST00000545942 DHX36Q9H2U1 1008 aaKnown RBP27.77■■■□□ 2.04
CHD4-214ENST00000545942 RHPN1Q8TCX5 695 aa27.76■■■□□ 2.03
CHD4-214ENST00000545942 TGFBRAP1Q8WUH2 860 aa27.76■■■□□ 2.03
CHD4-214ENST00000545942 ZBTB40Q9NUA8 1239 aa27.76■■■□□ 2.03
CHD4-214ENST00000545942 HERC5Q9UII4 1024 aaKnown RBP27.76■■■□□ 2.03
CHD4-214ENST00000545942 TRIM75PA6NK02 468 aa27.75■■■□□ 2.03
CHD4-214ENST00000545942 HMMRO75330 724 aa27.75■■■□□ 2.03
CHD4-214ENST00000545942 IDH1O75874 414 aaKnown RBP27.75■■■□□ 2.03
CHD4-214ENST00000545942 SLC9C1Q4G0N8 1177 aa27.75■■■□□ 2.03
CHD4-214ENST00000545942 GADL1Q6ZQY3 521 aa27.75■■■□□ 2.03
CHD4-214ENST00000545942 NBPF11Q86T75 865 aa27.75■■■□□ 2.03
CHD4-214ENST00000545942 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms