RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 KIF18AQ8NI77 898 aa17.65■□□□□ 0.42
CNN3-207ENST00000545882 MYL10Q9BUA6 226 aa17.65■□□□□ 0.42
CNN3-207ENST00000545882 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.65■□□□□ 0.42
CNN3-207ENST00000545882 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.65■□□□□ 0.42
CNN3-207ENST00000545882 DDX41Q9UJV9 622 aaKnown RBP17.65■□□□□ 0.42
CNN3-207ENST00000545882 V9GYY5 206 aaPredicted RBP17.65■□□□□ 0.42
CNN3-207ENST00000545882 ZBTB43O43298 467 aa17.64■□□□□ 0.42
CNN3-207ENST00000545882 STARD3NLO95772 234 aa17.64■□□□□ 0.42
CNN3-207ENST00000545882 TPM4P67936 248 aa17.64■□□□□ 0.42
CNN3-207ENST00000545882 FOXP4Q8IVH2 680 aaPredicted RBP17.64■□□□□ 0.42
CNN3-207ENST00000545882 ERO1AQ96HE7 468 aa17.64■□□□□ 0.42
CNN3-207ENST00000545882 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.64■□□□□ 0.42
CNN3-207ENST00000545882 AHDC1Q5TGY3 1603 aaPredicted RBP17.64■□□□□ 0.41
CNN3-207ENST00000545882 MYH6P13533 1939 aa17.64■□□□□ 0.41
CNN3-207ENST00000545882 KAT6BQ8WYB5 2073 aa17.64■□□□□ 0.41
CNN3-207ENST00000545882 KIF2AO00139 706 aaPredicted RBP17.64■□□□□ 0.41
CNN3-207ENST00000545882 FGFR2P21802 821 aa17.64■□□□□ 0.41
CNN3-207ENST00000545882 SFPQP23246 707 aaKnown RBP eCLIP17.64■□□□□ 0.41
CNN3-207ENST00000545882 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.41
CNN3-207ENST00000545882 KMT5BQ4FZB7 885 aa17.64■□□□□ 0.41
CNN3-207ENST00000545882 GTPBP4Q9BZE4 634 aaKnown RBP17.64■□□□□ 0.41
CNN3-207ENST00000545882 ROBO1Q9Y6N7 1651 aa17.64■□□□□ 0.41
CNN3-207ENST00000545882 GOLGA8AA7E2F4 631 aa17.63■□□□□ 0.41
CNN3-207ENST00000545882 CYP19A1P11511 503 aaPredicted RBP17.63■□□□□ 0.41
CNN3-207ENST00000545882 CTDSPL2Q05D32 466 aa17.63■□□□□ 0.41
CNN3-207ENST00000545882 LONRF3Q496Y0 759 aa17.63■□□□□ 0.41
CNN3-207ENST00000545882 SYTL4Q96C24 671 aaPredicted RBP17.63■□□□□ 0.41
CNN3-207ENST00000545882 L2HGDHQ9H9P8 463 aa17.63■□□□□ 0.41
CNN3-207ENST00000545882 ZSWIM5Q9P217 1185 aa17.63■□□□□ 0.41
CNN3-207ENST00000545882 TAOK2Q9UL54 1235 aa17.63■□□□□ 0.41
CNN3-207ENST00000545882 CUTAO60888 179 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 SLU7O95391 586 aaKnown RBP17.62■□□□□ 0.41
CNN3-207ENST00000545882 TMEM67Q5HYA8 995 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 CPLX2Q6PUV4 134 aaKnown RBP17.62■□□□□ 0.41
CNN3-207ENST00000545882 IFNL3Q8IZI9 196 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 JMYQ8N9B5 988 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 ZNF397Q8NF99 534 aaPredicted RBP17.62■□□□□ 0.41
CNN3-207ENST00000545882 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
CNN3-207ENST00000545882 MORC2Q9Y6X9 1032 aaPredicted RBP17.62■□□□□ 0.41
CNN3-207ENST00000545882 STK36Q9NRP7 1315 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 PATL2C9JE40 543 aaKnown RBP17.62■□□□□ 0.41
CNN3-207ENST00000545882 PDE8AO60658 829 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 UQCRFS1P1P0C7P4 283 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 LIFRP42702 1097 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 CCDC93Q567U6 631 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 KRBA2Q6ZNG9 492 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 TRMT112Q9UI30 125 aaKnown RBP17.62■□□□□ 0.41
CNN3-207ENST00000545882 TBC1D2BQ9UPU7 963 aa17.62■□□□□ 0.41
CNN3-207ENST00000545882 DOT1LQ8TEK3 1739 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 FOXN1O15353 648 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 FMNL1O95466 1100 aaPredicted RBP17.61■□□□□ 0.41
CNN3-207ENST00000545882 BMP6P22004 513 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 GUCY1A2P33402 732 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 TOB1P50616 345 aaPredicted RBP17.61■□□□□ 0.41
CNN3-207ENST00000545882 MDM2Q00987 491 aaPredicted RBP17.61■□□□□ 0.41
CNN3-207ENST00000545882 MYL5Q02045 173 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 PDE4BQ07343 736 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 ELF2Q15723 593 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 NFXL1Q6ZNB6 911 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 STK11IPQ8N1F8 1099 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 LRRN4CLQ8ND94 238 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 AIDAQ96BJ3 306 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 TMX1Q9H3N1 280 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 ZBTB1Q9Y2K1 713 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 NID2Q14112 1375 aa17.61■□□□□ 0.41
CNN3-207ENST00000545882 GNL2Q13823 731 aaKnown RBP17.6■□□□□ 0.41
CNN3-207ENST00000545882 FBXO38Q6PIJ6 1188 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 SYT10Q6XYQ8 523 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 LPIN2Q92539 896 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 SLC26A6Q9BXS9 759 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 PCDHA5Q9Y5H7 936 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 GSG1L2A8MUP6 293 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 TMEM232C9JQI7 657 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 SNAP23O00161 211 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 MBD4O95243 580 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 UBASH3AP57075 661 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 SSRP1Q08945 709 aaKnown RBP17.6■□□□□ 0.41
CNN3-207ENST00000545882 DHX8Q14562 1220 aaKnown RBP17.6■□□□□ 0.41
CNN3-207ENST00000545882 PUM3Q15397 648 aaKnown RBP17.6■□□□□ 0.41
CNN3-207ENST00000545882 MAGEB6Q8N7X4 407 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 SPATA5Q8NB90 893 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 ARMT1Q9H993 441 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 FAM53CQ9NYF3 392 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 ZHX1Q9UKY1 873 aaPredicted RBP17.6■□□□□ 0.41
CNN3-207ENST00000545882 KCNH3Q9ULD8 1083 aa17.6■□□□□ 0.41
CNN3-207ENST00000545882 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
CNN3-207ENST00000545882 GRIN1Q05586 938 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 PTPN21Q16825 1174 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 VSTM4Q8IW00 320 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 INTS13Q9NVM9 706 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 FANCLQ9NW38 375 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 SLC12A7Q9Y666 1083 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 BTBD18B2RXH4 712 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 PRKAB2O43741 272 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 IFNAR1P17181 557 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 RASGRF1Q13972 1273 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 TRIM29Q14134 588 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 NOSTRINQ8IVI9 506 aa17.59■□□□□ 0.41
CNN3-207ENST00000545882 ZNF34Q8IZ26 560 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms