RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 RASAL3Q86YV0 1011 aa16.68■□□□□ 0.26
TSEN54-203ENST00000545228 HOOK2Q96ED9 719 aa16.68■□□□□ 0.26
TSEN54-203ENST00000545228 DDRGK1Q96HY6 314 aa16.68■□□□□ 0.26
TSEN54-203ENST00000545228 CSRNP1Q96S65 589 aa16.68■□□□□ 0.26
TSEN54-203ENST00000545228 NDUFB9Q9Y6M9 179 aa16.68■□□□□ 0.26
TSEN54-203ENST00000545228 CDK5RAP2Q96SN8 1893 aa16.67■□□□□ 0.26
TSEN54-203ENST00000545228 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
TSEN54-203ENST00000545228 RGS3P49796 1198 aa16.67■□□□□ 0.26
TSEN54-203ENST00000545228 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
TSEN54-203ENST00000545228 BMP2KLQ5H9B9 411 aa16.67■□□□□ 0.26
TSEN54-203ENST00000545228 APPBP2Q92624 585 aa16.67■□□□□ 0.26
TSEN54-203ENST00000545228 ZBED3Q96IU2 234 aaPredicted RBP16.67■□□□□ 0.26
TSEN54-203ENST00000545228 ZNF532Q9HCE3 1301 aa16.67■□□□□ 0.26
TSEN54-203ENST00000545228 MAGEB6P1A0A0J9YX57 407 aa16.66■□□□□ 0.26
TSEN54-203ENST00000545228 PPP4CP60510 307 aa16.66■□□□□ 0.26
TSEN54-203ENST00000545228 GRIK5Q16478 980 aa16.66■□□□□ 0.26
TSEN54-203ENST00000545228 NBPF9Q3BBW0 867 aa16.66■□□□□ 0.26
TSEN54-203ENST00000545228 RUFY2Q8WXA3 655 aa16.66■□□□□ 0.26
TSEN54-203ENST00000545228 CRNKL1Q9BZJ0 848 aaKnown RBP16.66■□□□□ 0.26
TSEN54-203ENST00000545228 VEZTQ9HBM0 779 aa16.66■□□□□ 0.26
TSEN54-203ENST00000545228 DIAPH3Q9NSV4 1193 aa16.66■□□□□ 0.26
TSEN54-203ENST00000545228 GTF3C3Q9Y5Q9 886 aa16.66■□□□□ 0.26
TSEN54-203ENST00000545228 PAPPA2Q9BXP8 1791 aa16.66■□□□□ 0.26
TSEN54-203ENST00000545228 NAV1Q8NEY1 1877 aa16.65■□□□□ 0.26
TSEN54-203ENST00000545228 MYH1P12882 1939 aa16.65■□□□□ 0.26
TSEN54-203ENST00000545228 GNAT2P19087 354 aa16.65■□□□□ 0.26
TSEN54-203ENST00000545228 NF2P35240 595 aa16.65■□□□□ 0.26
TSEN54-203ENST00000545228 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
TSEN54-203ENST00000545228 AMOTL1Q8IY63 956 aa16.65■□□□□ 0.26
TSEN54-203ENST00000545228 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
TSEN54-203ENST00000545228 PRMT6Q96LA8 375 aaPredicted RBP16.65■□□□□ 0.26
TSEN54-203ENST00000545228 USP40Q9NVE5 1235 aa16.65■□□□□ 0.26
TSEN54-203ENST00000545228 SCAF8Q9UPN6 1271 aaKnown RBP16.65■□□□□ 0.26
TSEN54-203ENST00000545228 EIF5BO60841 1220 aaKnown RBP16.64■□□□□ 0.25
TSEN54-203ENST00000545228 NPM3O75607 178 aaKnown RBP16.64■□□□□ 0.25
TSEN54-203ENST00000545228 TTLL12Q14166 644 aaPredicted RBP16.64■□□□□ 0.25
TSEN54-203ENST00000545228 APOBEC3HQ6NTF7 200 aaKnown RBP16.64■□□□□ 0.25
TSEN54-203ENST00000545228 TEX11Q8IYF3 940 aa16.64■□□□□ 0.25
TSEN54-203ENST00000545228 TDRD3Q9H7E2 651 aaKnown RBP16.64■□□□□ 0.25
TSEN54-203ENST00000545228 HELLSQ9NRZ9 838 aa16.64■□□□□ 0.25
TSEN54-203ENST00000545228 AATFQ9NY61 560 aaKnown RBP eCLIP16.64■□□□□ 0.25
TSEN54-203ENST00000545228 ZNF70Q9UC06 446 aaPredicted RBP16.64■□□□□ 0.25
TSEN54-203ENST00000545228 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.25
TSEN54-203ENST00000545228 COL2A1P02458 1487 aaPredicted RBP16.63■□□□□ 0.25
TSEN54-203ENST00000545228 ENTPD3O75355 529 aa16.63■□□□□ 0.25
TSEN54-203ENST00000545228 PRAMEF18Q5VWM3 479 aa16.63■□□□□ 0.25
TSEN54-203ENST00000545228 MOB2Q70IA6 237 aa16.63■□□□□ 0.25
TSEN54-203ENST00000545228 IDI2Q9BXS1 227 aa16.63■□□□□ 0.25
TSEN54-203ENST00000545228 RAD50Q92878 1312 aa16.63■□□□□ 0.25
TSEN54-203ENST00000545228 TCRBV5S4A2TA0A5A2 114 aa16.62■□□□□ 0.25
TSEN54-203ENST00000545228 CLRN2A0PK11 232 aa16.62■□□□□ 0.25
TSEN54-203ENST00000545228 UBE2Q2LH0YL09 131 aa16.62■□□□□ 0.25
TSEN54-203ENST00000545228 SDSP20132 328 aa16.62■□□□□ 0.25
TSEN54-203ENST00000545228 USP5P45974 858 aa16.62■□□□□ 0.25
TSEN54-203ENST00000545228 CDC42EP5Q6NZY7 148 aa16.62■□□□□ 0.25
TSEN54-203ENST00000545228 GSPT1P15170 499 aaKnown RBP16.61■□□□□ 0.25
TSEN54-203ENST00000545228 SUPT20HL1Q3ZLR7 823 aa16.61■□□□□ 0.25
TSEN54-203ENST00000545228 ZMYM1Q5SVZ6 1142 aa16.61■□□□□ 0.25
TSEN54-203ENST00000545228 CTU1Q7Z7A3 348 aaKnown RBP16.61■□□□□ 0.25
TSEN54-203ENST00000545228 MIGA1Q8NAN2 632 aa16.61■□□□□ 0.25
TSEN54-203ENST00000545228 ZNF384Q8TF68 577 aa16.61■□□□□ 0.25
TSEN54-203ENST00000545228 NACAP1Q9BZK3 213 aa16.61■□□□□ 0.25
TSEN54-203ENST00000545228 ATP8A2Q9NTI2 1148 aa16.61■□□□□ 0.25
TSEN54-203ENST00000545228 TAOK2Q9UL54 1235 aa16.61■□□□□ 0.25
TSEN54-203ENST00000545228 LAMB1P07942 1786 aa16.6■□□□□ 0.25
TSEN54-203ENST00000545228 MBD4O95243 580 aa16.6■□□□□ 0.25
TSEN54-203ENST00000545228 MCMDC2Q4G0Z9 681 aa16.6■□□□□ 0.25
TSEN54-203ENST00000545228 FAM151AQ8WW52 585 aa16.6■□□□□ 0.25
TSEN54-203ENST00000545228 DHX36Q9H2U1 1008 aaKnown RBP16.6■□□□□ 0.25
TSEN54-203ENST00000545228 MYH8P13535 1937 aa16.6■□□□□ 0.25
TSEN54-203ENST00000545228 TCP10L2B9ZVM9 353 aa16.59■□□□□ 0.25
TSEN54-203ENST00000545228 SLC34A2O95436 690 aa16.59■□□□□ 0.25
TSEN54-203ENST00000545228 HLA-DOAP06340 250 aa16.59■□□□□ 0.25
TSEN54-203ENST00000545228 RHBDL3P58872 404 aa16.59■□□□□ 0.25
TSEN54-203ENST00000545228 DCAF15Q66K64 600 aa16.59■□□□□ 0.25
TSEN54-203ENST00000545228 GIMAP6Q6P9H5 292 aa16.59■□□□□ 0.25
TSEN54-203ENST00000545228 RIOK1Q9BRS2 568 aaKnown RBP16.59■□□□□ 0.25
TSEN54-203ENST00000545228 DEFB129Q9H1M3 183 aa16.59■□□□□ 0.25
TSEN54-203ENST00000545228 GPAA1O43292 621 aa16.58■□□□□ 0.24
TSEN54-203ENST00000545228 CDC45O75419 566 aa16.58■□□□□ 0.24
TSEN54-203ENST00000545228 SOX10P56693 466 aa16.58■□□□□ 0.24
TSEN54-203ENST00000545228 PICALMQ13492 652 aa16.58■□□□□ 0.24
TSEN54-203ENST00000545228 RASA3Q14644 834 aa16.58■□□□□ 0.24
TSEN54-203ENST00000545228 ARMC9Q7Z3E5 817 aa16.58■□□□□ 0.24
TSEN54-203ENST00000545228 ADGRA1Q86SQ6 560 aa16.58■□□□□ 0.24
TSEN54-203ENST00000545228 ZSCAN29Q8IWY8 852 aaPredicted RBP16.58■□□□□ 0.24
TSEN54-203ENST00000545228 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
TSEN54-203ENST00000545228 TRIM34Q9BYJ4 488 aa16.58■□□□□ 0.24
TSEN54-203ENST00000545228 BAZ2AQ9UIF9 1905 aaKnown RBP16.58■□□□□ 0.24
TSEN54-203ENST00000545228 TBC1D8O95759 1140 aa16.57■□□□□ 0.24
TSEN54-203ENST00000545228 TM4SF4P48230 202 aa16.57■□□□□ 0.24
TSEN54-203ENST00000545228 TTC6Q86TZ1 520 aa16.57■□□□□ 0.24
TSEN54-203ENST00000545228 TGFBRAP1Q8WUH2 860 aa16.57■□□□□ 0.24
TSEN54-203ENST00000545228 OSBPL5Q9H0X9 879 aaPredicted RBP16.57■□□□□ 0.24
TSEN54-203ENST00000545228 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
TSEN54-203ENST00000545228 PCDHAC2Q9Y5I4 1007 aa16.57■□□□□ 0.24
TSEN54-203ENST00000545228 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
TSEN54-203ENST00000545228 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
TSEN54-203ENST00000545228 ATRNL1Q5VV63 1379 aa16.56■□□□□ 0.24
TSEN54-203ENST00000545228 FLT1P17948 1338 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms