RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ZAP70P43403 619 aa14.39□□□□□ -0.11
HDAC4-216ENST00000544989 MAP3K12Q12852 859 aa14.39□□□□□ -0.11
HDAC4-216ENST00000544989 AAMPQ13685 434 aa14.39□□□□□ -0.11
HDAC4-216ENST00000544989 ERO1BQ86YB8 467 aa14.39□□□□□ -0.11
HDAC4-216ENST00000544989 ZSCAN29Q8IWY8 852 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-216ENST00000544989 OPTNQ96CV9 577 aa14.39□□□□□ -0.11
HDAC4-216ENST00000544989 LRRCC1Q9C099 1032 aa14.39□□□□□ -0.11
HDAC4-216ENST00000544989 ELP3Q9H9T3 547 aa14.39□□□□□ -0.11
HDAC4-216ENST00000544989 TSKSQ9UJT2 592 aa14.39□□□□□ -0.11
HDAC4-216ENST00000544989 COL2A1P02458 1487 aaPredicted RBP14.38□□□□□ -0.11
HDAC4-216ENST00000544989 SPDYE5A6NIY4 337 aa14.38□□□□□ -0.11
HDAC4-216ENST00000544989 APBB1O00213 710 aa14.38□□□□□ -0.11
HDAC4-216ENST00000544989 RHBDL3P58872 404 aa14.38□□□□□ -0.11
HDAC4-216ENST00000544989 PPP4CP60510 307 aa14.38□□□□□ -0.11
HDAC4-216ENST00000544989 IFNL1Q8IU54 200 aa14.38□□□□□ -0.11
HDAC4-216ENST00000544989 ZNF384Q8TF68 577 aa14.38□□□□□ -0.11
HDAC4-216ENST00000544989 ZNF112Q9UJU3 913 aa14.38□□□□□ -0.11
HDAC4-216ENST00000544989 AK9Q5TCS8 1911 aa14.37□□□□□ -0.11
HDAC4-216ENST00000544989 ATRNL1Q5VV63 1379 aa14.37□□□□□ -0.11
HDAC4-216ENST00000544989 TESPA1A2RU30 521 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-216ENST00000544989 TBC1D12O60347 775 aa14.37□□□□□ -0.11
HDAC4-216ENST00000544989 IDH1O75874 414 aaKnown RBP14.37□□□□□ -0.11
HDAC4-216ENST00000544989 PPATQ06203 517 aa14.37□□□□□ -0.11
HDAC4-216ENST00000544989 NOL9Q5SY16 702 aaKnown RBP14.37□□□□□ -0.11
HDAC4-216ENST00000544989 MIGA2Q7L4E1 593 aa14.37□□□□□ -0.11
HDAC4-216ENST00000544989 TEX11Q8IYF3 940 aa14.37□□□□□ -0.11
HDAC4-216ENST00000544989 DHX36Q9H2U1 1008 aaKnown RBP14.37□□□□□ -0.11
HDAC4-216ENST00000544989 MAST2Q6P0Q8 1798 aa14.37□□□□□ -0.11
HDAC4-216ENST00000544989 CETPP11597 493 aa14.36□□□□□ -0.11
HDAC4-216ENST00000544989 MAP3K10Q02779 954 aa14.36□□□□□ -0.11
HDAC4-216ENST00000544989 PPIL2Q13356 520 aa14.36□□□□□ -0.11
HDAC4-216ENST00000544989 SNAPC2Q13487 334 aa14.36□□□□□ -0.11
HDAC4-216ENST00000544989 PICALMQ13492 652 aa14.36□□□□□ -0.11
HDAC4-216ENST00000544989 OTUD5Q96G74 571 aa14.36□□□□□ -0.11
HDAC4-216ENST00000544989 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
HDAC4-216ENST00000544989 DCTPP1Q9H773 170 aa14.36□□□□□ -0.11
HDAC4-216ENST00000544989 ZCCHC17Q9NP64 241 aaKnown RBP14.36□□□□□ -0.11
HDAC4-216ENST00000544989 PIH1D3Q9NQM4 214 aaKnown RBP14.36□□□□□ -0.11
HDAC4-216ENST00000544989 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-216ENST00000544989 SNCAIPQ9Y6H5 919 aa14.36□□□□□ -0.11
HDAC4-216ENST00000544989 LAMB1P07942 1786 aa14.35□□□□□ -0.11
HDAC4-216ENST00000544989 OTOFQ9HC10 1997 aa14.35□□□□□ -0.11
HDAC4-216ENST00000544989 ATP5JP18859 108 aa14.35□□□□□ -0.11
HDAC4-216ENST00000544989 CYP7A1P22680 504 aa14.35□□□□□ -0.11
HDAC4-216ENST00000544989 GJA5P36382 358 aa14.35□□□□□ -0.11
HDAC4-216ENST00000544989 ZKSCAN4Q969J2 545 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-216ENST00000544989 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
HDAC4-216ENST00000544989 OSBPL5Q9H0X9 879 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-216ENST00000544989 DDX4Q9NQI0 724 aaKnown RBP14.35□□□□□ -0.11
HDAC4-216ENST00000544989 PICK1Q9NRD5 415 aa14.35□□□□□ -0.11
HDAC4-216ENST00000544989 AATFQ9NY61 560 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC4-216ENST00000544989 HERC5Q9UII4 1024 aaKnown RBP14.35□□□□□ -0.11
HDAC4-216ENST00000544989 DDTLA6NHG4 134 aaPredicted RBP14.34□□□□□ -0.11
HDAC4-216ENST00000544989 CTNND1O60716 968 aaKnown RBP14.34□□□□□ -0.11
HDAC4-216ENST00000544989 ZFPM1Q8IX07 1006 aa14.34□□□□□ -0.11
HDAC4-216ENST00000544989 PI4KBQ9UBF8 816 aa14.34□□□□□ -0.11
HDAC4-216ENST00000544989 MKI67P46013 3256 aaKnown RBP14.33□□□□□ -0.12
HDAC4-216ENST00000544989 CCL15-CCL14A0A0B4J2E2 113 aa14.33□□□□□ -0.12
HDAC4-216ENST00000544989 GPR25O00155 361 aa14.33□□□□□ -0.12
HDAC4-216ENST00000544989 TBC1D8O95759 1140 aa14.33□□□□□ -0.12
HDAC4-216ENST00000544989 INPP5BP32019 993 aa14.33□□□□□ -0.12
HDAC4-216ENST00000544989 PKN2Q16513 984 aaKnown RBP14.33□□□□□ -0.12
HDAC4-216ENST00000544989 CCL15Q16663 113 aa14.33□□□□□ -0.12
HDAC4-216ENST00000544989 SH3BP5LQ7L8J4 393 aa14.33□□□□□ -0.12
HDAC4-216ENST00000544989 SCYL3Q8IZE3 742 aa14.33□□□□□ -0.12
HDAC4-216ENST00000544989 MAGEB6Q8N7X4 407 aa14.33□□□□□ -0.12
HDAC4-216ENST00000544989 SH3RF3Q8TEJ3 882 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-216ENST00000544989 DNAJC2Q99543 621 aaKnown RBP14.33□□□□□ -0.12
HDAC4-216ENST00000544989 TBC1D2Q9BYX2 928 aa14.33□□□□□ -0.12
HDAC4-216ENST00000544989 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.33□□□□□ -0.12
HDAC4-216ENST00000544989 ZBTB47Q9UFB7 747 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-216ENST00000544989 DOCK2Q92608 1830 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 PHF20L1A8MW92 1017 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 IGF2BP3O00425 579 aaKnown RBP eCLIP14.32□□□□□ -0.12
HDAC4-216ENST00000544989 CXCL11O14625 94 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 IRF6O14896 467 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 FKTNO75072 461 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 HLA-DOAP06340 250 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 CTU1Q7Z7A3 348 aaKnown RBP14.32□□□□□ -0.12
HDAC4-216ENST00000544989 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 HAUS7Q99871 368 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 TRIM34Q9BYJ4 488 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.32□□□□□ -0.121e-7■■■■■ 26.8
HDAC4-216ENST00000544989 PAG1Q9NWQ8 432 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 KCNH4Q9UQ05 1017 aa14.32□□□□□ -0.12
HDAC4-216ENST00000544989 GOLIM4O00461 696 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 DGKZQ13574 1117 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 SLC9C2Q5TAH2 1124 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 ADGRA1Q86SQ6 560 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 FOXP4Q8IVH2 680 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-216ENST00000544989 ZNF296Q8WUU4 475 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-216ENST00000544989 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 BRI3BPQ8WY22 251 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 ANTXR1Q9H6X2 564 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 ZFYVE28Q9HCC9 887 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 ECHDC1Q9NTX5 307 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 GINM1Q9NU53 330 aa14.31□□□□□ -0.12
HDAC4-216ENST00000544989 FLT1P17948 1338 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms