RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 NLRP3Q96P20 1036 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 A0A1W2PQ27 194 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 A0A1W2PQ64 194 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 A0A1W2PQD8 194 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 PDE6AP16499 860 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 AMPD3Q01432 767 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 TSGA10IPQ3SY00 556 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 IFNL3Q8IZI9 196 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 PDLIM2Q96JY6 352 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 IL25Q9H293 177 aa6.59□□□□□ -1.35
VPS50-220ENST00000544910 LUC7LQ9NQ29 371 aaKnown RBP6.59□□□□□ -1.35
VPS50-220ENST00000544910 BMP2KQ9NSY1 1161 aaPredicted RBP6.59□□□□□ -1.35
VPS50-220ENST00000544910 ADD2P35612 726 aa6.59□□□□□ -1.36
VPS50-220ENST00000544910 ST5P78524 1137 aa6.59□□□□□ -1.36
VPS50-220ENST00000544910 PPARAQ07869 468 aa6.59□□□□□ -1.36
VPS50-220ENST00000544910 AKNAD1Q5T1N1 836 aa6.59□□□□□ -1.36
VPS50-220ENST00000544910 CTR9Q6PD62 1173 aa6.59□□□□□ -1.36
VPS50-220ENST00000544910 CALML4Q96GE6 196 aa6.59□□□□□ -1.36
VPS50-220ENST00000544910 SRRTQ9BXP5 876 aaKnown RBP6.59□□□□□ -1.36
VPS50-220ENST00000544910 SHTN1A0MZ66 631 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 FGFR1OPO95684 399 aaKnown RBP6.58□□□□□ -1.36
VPS50-220ENST00000544910 MCM3P25205 808 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 RFC4P35249 363 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 GNAQP50148 359 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 GNG11P61952 73 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 RABL6Q3YEC7 729 aaPredicted RBP6.58□□□□□ -1.36
VPS50-220ENST00000544910 HSP90AA4PQ58FG1 418 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 CCDC181Q5TID7 509 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 MRFAP1L1Q96HT8 127 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 RAB34Q9BZG1 259 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 TCP11L1Q9NUJ3 509 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 KIAA1468Q9P260 1216 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 DNAI1Q9UI46 699 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 NDUFA8P51970 172 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 IRX3P78415 501 aaPredicted RBP6.58□□□□□ -1.36
VPS50-220ENST00000544910 PNOCQ13519 176 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 PPP2R5BQ15173 497 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 KIF4BQ2VIQ3 1234 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 HEATR3Q7Z4Q2 680 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 DIS3L2Q8IYB7 885 aaKnown RBP6.58□□□□□ -1.36
VPS50-220ENST00000544910 OSBP2Q969R2 916 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 CMA1P23946 247 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 CALML3P27482 149 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 SYT10Q6XYQ8 523 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 CCDC43Q96MW1 224 aaKnown RBP6.58□□□□□ -1.36
VPS50-220ENST00000544910 EXOC1Q9NV70 894 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 POLR3EQ9NVU0 708 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 PYCARDQ9ULZ3 195 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 ZNF609O15014 1411 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 MCM7P33993 719 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 RBM5P52756 815 aaKnown RBP eCLIP6.58□□□□□ -1.36
VPS50-220ENST00000544910 SPAG1Q07617 926 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 BMS1Q14692 1282 aaKnown RBP6.58□□□□□ -1.36
VPS50-220ENST00000544910 PDIA6Q15084 440 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 SPA17Q15506 151 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 GIGYF2Q6Y7W6 1299 aaKnown RBP6.58□□□□□ -1.36
VPS50-220ENST00000544910 PUS7LQ9H0K6 701 aaKnown RBP6.58□□□□□ -1.36
VPS50-220ENST00000544910 ASAP1Q9ULH1 1129 aa6.58□□□□□ -1.36
VPS50-220ENST00000544910 SETD1AO15047 1707 aaKnown RBP6.57□□□□□ -1.36
VPS50-220ENST00000544910 ERLIN2O94905 339 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 POSTNQ15063 836 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 C11orf57Q6ZUT1 292 aaPredicted RBP6.57□□□□□ -1.36
VPS50-220ENST00000544910 CTNND2Q9UQB3 1225 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 SH2B2O14492 632 aaPredicted RBP6.57□□□□□ -1.36
VPS50-220ENST00000544910 N4BP3O15049 544 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 PPP6R2O75170 966 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 PDE8BO95263 885 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 CCDC175P0C221 793 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 LRRC8AQ8IWT6 810 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 KCNJ14Q9UNX9 436 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 LTN1O94822 1766 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 FMNL1O95466 1100 aaPredicted RBP6.57□□□□□ -1.36
VPS50-220ENST00000544910 HMGB2P26583 209 aaKnown RBP6.57□□□□□ -1.36
VPS50-220ENST00000544910 ZNF174Q15697 407 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 MICALCLQ6ZW33 695 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 BRINP3Q76B58 766 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 ERO1AQ96HE7 468 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 NGLY1Q96IV0 654 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 ZHX3Q9H4I2 956 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 MCM9Q9NXL9 1143 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 RCOR1Q9UKL0 485 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 ABCC12Q96J65 1359 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 SSBP05455 408 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS50-220ENST00000544910 UBA7P41226 1012 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 PHKA1P46020 1223 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 SPECC1Q5M775 1068 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 NLRP10Q86W26 655 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 KRT222Q8N1A0 295 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 TRIM47Q96LD4 638 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 BAG1Q99933 345 aaPredicted RBP6.57□□□□□ -1.36
VPS50-220ENST00000544910 SYNRGQ9UMZ2 1314 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 POLR2DO15514 142 aaKnown RBP6.57□□□□□ -1.36
VPS50-220ENST00000544910 MTIF2P46199 727 aaKnown RBP6.57□□□□□ -1.36
VPS50-220ENST00000544910 RBM6P78332 1123 aaKnown RBP6.57□□□□□ -1.36
VPS50-220ENST00000544910 CCDC96Q2M329 555 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 MAP9Q49MG5 647 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 NOSTRINQ8IVI9 506 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 MLKLQ8NB16 471 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 LRRC27Q9C0I9 530 aa6.57□□□□□ -1.36
VPS50-220ENST00000544910 NALCNQ8IZF0 1738 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms