RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 NIP7Q9Y221 180 aaKnown RBP eCLIP5.5□□□□□ -1.53
CNGA1-209ENST00000544810 SOWAHDA6NJG2 315 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 FAM177BA6PVY3 158 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L5A8MUK1 530 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 H7C1D1 291 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 TPM3P06753 285 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 NOLC1Q14978 699 aaKnown RBP eCLIP5.49□□□□□ -1.53
CNGA1-209ENST00000544810 TNIP1Q15025 636 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 CC2D1BQ5T0F9 858 aaKnown RBP5.49□□□□□ -1.53
CNGA1-209ENST00000544810 ZNF771Q7L3S4 317 aaPredicted RBP5.49□□□□□ -1.53
CNGA1-209ENST00000544810 ZNF594Q96JF6 807 aaPredicted RBP5.49□□□□□ -1.53
CNGA1-209ENST00000544810 NBPF26B4DH59 902 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 SMARCA5O60264 1052 aaPredicted RBP5.49□□□□□ -1.53
CNGA1-209ENST00000544810 RAD17O75943 681 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 MMP14P50281 582 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 RARSP54136 660 aaKnown RBP5.49□□□□□ -1.53
CNGA1-209ENST00000544810 SLF2Q8IX21 1173 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 RPGRQ92834 1020 aaKnown RBP5.49□□□□□ -1.53
CNGA1-209ENST00000544810 CRAMP1Q96RY5 1269 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 KIF2CQ99661 725 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 CFHR5Q9BXR6 569 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 RTFDC1Q9BY42 306 aaPredicted RBP5.49□□□□□ -1.53
CNGA1-209ENST00000544810 EFCC1Q9HA90 598 aa5.49□□□□□ -1.53
CNGA1-209ENST00000544810 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.49□□□□□ -1.53
CNGA1-209ENST00000544810 RBBP6Q7Z6E9 1792 aaKnown RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L15C9J2P7 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L10C9JJH3 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L13C9JLJ4 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L12C9JPN9 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L11C9JVI0 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L21D6R901 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L18D6R9N7 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L22D6RA61 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L17D6RBQ6 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L19D6RCP7 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L20D6RJB6 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 SNPHO15079 494 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 ABL1P00519 1130 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 SLFN14P0C7P3 912 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 BRD2P25440 801 aaKnown RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 USP17L24Q0WX57 530 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 CHAF1AQ13111 956 aaPredicted RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 NCOA4Q13772 614 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 BMP2KLQ5H9B9 411 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 CAVIN1Q6NZI2 390 aaKnown RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 ZNF790Q6PG37 636 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 SAMD7Q7Z3H4 446 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 SUPT20HQ8NEM7 779 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 PANK1Q8TE04 598 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 ARMC5Q96C12 935 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 DCPSQ96C86 337 aaKnown RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 CDCA5Q96FF9 252 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 MORC2Q9Y6X9 1032 aaPredicted RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 AKAP11Q9UKA4 1901 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 EGFRP00533 1210 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 RASA1P20936 1047 aa5.48□□□□□ -1.53
CNGA1-209ENST00000544810 ZNF211Q13398 564 aaPredicted RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 MVPQ14764 893 aaKnown RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 TBC1D10BQ4KMP7 808 aaPredicted RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 DDX41Q9UJV9 622 aaKnown RBP5.48□□□□□ -1.53
CNGA1-209ENST00000544810 PAPPA2Q9BXP8 1791 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 ARID4AP29374 1257 aaPredicted RBP5.47□□□□□ -1.53
CNGA1-209ENST00000544810 IL13P35225 146 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 SOX11P35716 441 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 TM4SF4P48230 202 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 PIP4K2AP48426 406 aaPredicted RBP5.47□□□□□ -1.53
CNGA1-209ENST00000544810 FKBP1BP68106 108 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 OTOP1Q7RTM1 612 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 WDR63Q8IWG1 891 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 DPF2Q92785 391 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 SYAP1Q96A49 352 aaPredicted RBP5.47□□□□□ -1.53
CNGA1-209ENST00000544810 RBM17Q96I25 401 aaKnown RBP5.47□□□□□ -1.53
CNGA1-209ENST00000544810 FMNL2Q96PY5 1086 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 R3HDMLQ9H3Y0 253 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 ATP6V0A2Q9Y487 856 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 TRIM17Q9Y577 477 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 PRAMEF22A3QJZ6 481 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 YDJCA8MPS7 323 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 RNF40O75150 1001 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 TERF2Q15554 542 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 MTHFSDQ2M296 383 aaKnown RBP5.47□□□□□ -1.53
CNGA1-209ENST00000544810 SWT1Q5T5J6 900 aaKnown RBP5.47□□□□□ -1.53
CNGA1-209ENST00000544810 GEMIN8Q9NWZ8 242 aaKnown RBP5.47□□□□□ -1.53
CNGA1-209ENST00000544810 LHX6Q9UPM6 363 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 KNSTRNQ9Y448 316 aa5.47□□□□□ -1.53
CNGA1-209ENST00000544810 VGLL3A8MV65 326 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 TRIM6-TRIM34B2RNG4 842 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 PTMAP06454 111 aaKnown RBP5.46□□□□□ -1.53
CNGA1-209ENST00000544810 KCNJ4P48050 445 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 RABEP1Q15276 862 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 NYXQ9GZU5 481 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 PRO3102Q9H379 93 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 FAM53CQ9NYF3 392 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 GGA3Q9NZ52 723 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 SEPT9Q9UHD8 586 aaPredicted RBP5.46□□□□□ -1.53
CNGA1-209ENST00000544810 CTNNA3Q9UI47 895 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 ZNF609O15014 1411 aa5.46□□□□□ -1.53
CNGA1-209ENST00000544810 RAD50Q92878 1312 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 APAF1O14727 1248 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 PRMT3O60678 531 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms