RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PLCD1P51178 756 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 TTC38Q5R3I4 469 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 KRT40Q6A162 431 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 MAEAQ7L5Y9 396 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 STAMQ92783 540 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 E7EWF7 191 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 TBC1D8BQ0IIM8 1120 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 BBXQ8WY36 941 aaPredicted RBP14.4□□□□□ -0.1
CHD4-211ENST00000544484 PHKG2P15735 406 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 LARGE2Q8N3Y3 721 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 PPP1R14CQ8TAE6 165 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 LEO1Q8WVC0 666 aaPredicted RBP14.4□□□□□ -0.1
CHD4-211ENST00000544484 PKNOX2Q96KN3 472 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 USH1GQ495M9 461 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 GRIPAP1Q4V328 841 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 CPXCR1Q8N123 301 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 CALRP27797 417 aaKnown RBP14.4□□□□□ -0.1
CHD4-211ENST00000544484 EAF2Q96CJ1 260 aaPredicted RBP14.4□□□□□ -0.1
CHD4-211ENST00000544484 BAG1Q99933 345 aaPredicted RBP14.4□□□□□ -0.1
CHD4-211ENST00000544484 MROH5Q6ZUA9 1318 aa14.4□□□□□ -0.1
CHD4-211ENST00000544484 HSPA4P34932 840 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 SLC1A4P43007 532 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 DDX39AO00148 427 aaKnown RBP14.39□□□□□ -0.11
CHD4-211ENST00000544484 RAD51AP2Q09MP3 1159 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 CMTR1Q8N1G2 835 aaKnown RBP14.39□□□□□ -0.11
CHD4-211ENST00000544484 GOLGA1Q92805 767 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 SH2D4AQ9H788 454 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 ZNF408Q9H9D4 720 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 USP21Q9UK80 565 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 AKR1B15C9JRZ8 316 aaPredicted RBP14.39□□□□□ -0.11
CHD4-211ENST00000544484 GSPT1P15170 499 aaKnown RBP14.39□□□□□ -0.11
CHD4-211ENST00000544484 ATP5JP18859 108 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 TFAP4Q01664 338 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 LMBR1Q8WVP7 490 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 IFT81Q8WYA0 676 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 CCDC122Q5T0U0 273 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 KRT222Q8N1A0 295 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 IGSF22Q8N9C0 903 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 VPS54Q9P1Q0 977 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 CCDC169A6NNP5 214 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 NCBP1Q09161 790 aaKnown RBP14.39□□□□□ -0.11
CHD4-211ENST00000544484 ARHGEF10LQ9HCE6 1279 aa14.39□□□□□ -0.11
CHD4-211ENST00000544484 A0A0D9SFI3 127 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 SMIM23A6NLE4 172 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 H0YIN7 160 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 RPL13P26373 211 aaKnown RBP14.38□□□□□ -0.11
CHD4-211ENST00000544484 PRPHP41219 470 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 RASAL2Q9UJF2 1139 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 MYCLP12524 364 aaPredicted RBP14.38□□□□□ -0.11
CHD4-211ENST00000544484 CTSWP56202 376 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 PTH1RQ03431 593 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 BIRC3Q13489 604 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 NCAPH2Q6IBW4 605 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 CNGA4Q8IV77 575 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 ZNF202O95125 648 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 RPS8P62241 208 aaKnown RBP14.38□□□□□ -0.11
CHD4-211ENST00000544484 ZHX1Q9UKY1 873 aaPredicted RBP14.38□□□□□ -0.11
CHD4-211ENST00000544484 GYG1P46976 350 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 DYMQ7RTS9 669 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 PICK1Q9NRD5 415 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 ERVV-2B6SEH9 535 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 TBC1D7Q9P0N9 293 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 FRMD4BQ9Y2L6 1034 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 KIAA0232Q92628 1395 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 ME3Q16798 604 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 CLSTN2Q9H4D0 955 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 CALCOCO1Q9P1Z2 691 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 ATP6V0A2Q9Y487 856 aa14.38□□□□□ -0.11
CHD4-211ENST00000544484 ABCC4O15439 1325 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 LRRC24Q50LG9 513 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 GTF2IP78347 998 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 SPECC1LQ69YQ0 1117 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 CSGALNACT2Q8N6G5 542 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 SSH3Q8TE77 659 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 STAMBPO95630 424 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 USP17L12C9JPN9 530 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 USP17L21D6R901 530 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 CUTAO60888 179 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 MSL1Q68DK7 614 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 KRT5P13647 590 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 MAP3K9P80192 1104 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 CCDC25Q86WR0 208 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 SNX29Q8TEQ0 813 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 ATRIPQ8WXE1 791 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 GINS2Q9Y248 185 aa14.37□□□□□ -0.11
CHD4-211ENST00000544484 IBTKQ9P2D0 1353 aaPredicted RBP14.36□□□□□ -0.11
CHD4-211ENST00000544484 NONOQ15233 471 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHD4-211ENST00000544484 TSNARE1Q96NA8 513 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 SRRTQ9BXP5 876 aaKnown RBP14.36□□□□□ -0.11
CHD4-211ENST00000544484 CBX8Q9HC52 389 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 LRWD1Q9UFC0 647 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 BLMP54132 1417 aaPredicted RBP14.36□□□□□ -0.11
CHD4-211ENST00000544484 EPB41P11171 864 aaKnown RBP14.36□□□□□ -0.11
CHD4-211ENST00000544484 DNAJC21Q5F1R6 531 aaKnown RBP14.36□□□□□ -0.11
CHD4-211ENST00000544484 NAP1L4Q99733 375 aaKnown RBP14.36□□□□□ -0.11
CHD4-211ENST00000544484 TLDC2A0PJX2 215 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 APBA3O96018 575 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 BCAMP50895 628 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 SDR42E1Q8WUS8 393 aa14.36□□□□□ -0.11
CHD4-211ENST00000544484 IQCGQ9H095 443 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms