RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 WDR19Q8NEZ3 1342 aa35.98■■■■□ 3.35
CCM2-219ENST00000544363 MYO3BQ8WXR4 1341 aa35.98■■■■□ 3.35
CCM2-219ENST00000544363 RAD17O75943 681 aa35.98■■■■□ 3.35
CCM2-219ENST00000544363 RSBN1LQ6PCB5 846 aaPredicted RBP35.98■■■■□ 3.35
CCM2-219ENST00000544363 LRRC2Q9BYS8 371 aa35.98■■■■□ 3.35
CCM2-219ENST00000544363 AGXT2Q9BYV1 514 aa35.98■■■■□ 3.35
CCM2-219ENST00000544363 SH2B1Q9NRF2 756 aaPredicted RBP35.98■■■■□ 3.35
CCM2-219ENST00000544363 MCM9Q9NXL9 1143 aa35.98■■■■□ 3.35
CCM2-219ENST00000544363 CYP2D7A0A087X1C5 515 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 PSMD14O00487 310 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 FGD1P98174 961 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 FBXL16Q8N461 479 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 KRT23Q9C075 422 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 INCENPQ9NQS7 918 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 TPCN1Q9ULQ1 816 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 CHST3Q7LGC8 479 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 JDP2Q8WYK2 163 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 ZDHHC15Q96MV8 337 aa35.97■■■■□ 3.35
CCM2-219ENST00000544363 CDK5RAP2Q96SN8 1893 aa35.96■■■■□ 3.35
CCM2-219ENST00000544363 B4E1Z4 1266 aa35.96■■■■□ 3.35
CCM2-219ENST00000544363 PRC1O43663 620 aa35.96■■■■□ 3.35
CCM2-219ENST00000544363 SERPINA10Q9UK55 444 aa35.96■■■■□ 3.35
CCM2-219ENST00000544363 ANTXR2P58335 489 aa35.95■■■■□ 3.35
CCM2-219ENST00000544363 APOBEC3HQ6NTF7 200 aaKnown RBP35.95■■■■□ 3.35
CCM2-219ENST00000544363 MAPKAPK5Q8IW41 473 aa35.95■■■■□ 3.35
CCM2-219ENST00000544363 INTS4Q96HW7 963 aaKnown RBP35.95■■■■□ 3.35
CCM2-219ENST00000544363 LARGE1O95461 756 aa35.94■■■■□ 3.34
CCM2-219ENST00000544363 USP17L8P0C7I0 530 aa35.94■■■■□ 3.34
CCM2-219ENST00000544363 DDIT3P35638 169 aa35.94■■■■□ 3.34
CCM2-219ENST00000544363 BRF1Q92994 677 aa35.94■■■■□ 3.34
CCM2-219ENST00000544363 LAMB1P07942 1786 aa35.94■■■■□ 3.34
CCM2-219ENST00000544363 SMIM22K7EJ46 135 aa35.94■■■■□ 3.34
CCM2-219ENST00000544363 PCP11498 1178 aaKnown RBP35.94■■■■□ 3.34
CCM2-219ENST00000544363 ME3Q16798 604 aa35.94■■■■□ 3.34
CCM2-219ENST00000544363 ADAMTSL1Q8N6G6 1762 aa35.93■■■■□ 3.34
CCM2-219ENST00000544363 NAV1Q8NEY1 1877 aa35.93■■■■□ 3.34
CCM2-219ENST00000544363 RASSF7Q02833 373 aa35.93■■■■□ 3.34
CCM2-219ENST00000544363 CYB5R4Q7L1T6 521 aa35.93■■■■□ 3.34
CCM2-219ENST00000544363 STK11IPQ8N1F8 1099 aa35.93■■■■□ 3.34
CCM2-219ENST00000544363 NKX2-3Q8TAU0 364 aa35.93■■■■□ 3.34
CCM2-219ENST00000544363 USP40Q9NVE5 1235 aa35.93■■■■□ 3.34
CCM2-219ENST00000544363 FGRP09769 529 aa35.92■■■■□ 3.34
CCM2-219ENST00000544363 CYP2D6P10635 497 aa35.92■■■■□ 3.34
CCM2-219ENST00000544363 C12orf60Q5U649 245 aa35.92■■■■□ 3.34
CCM2-219ENST00000544363 AMOTL1Q8IY63 956 aa35.92■■■■□ 3.34
CCM2-219ENST00000544363 GMLQ99445 158 aa35.92■■■■□ 3.34
CCM2-219ENST00000544363 FLT1P17948 1338 aa35.92■■■■□ 3.34
CCM2-219ENST00000544363 SLC3A2P08195 630 aaKnown RBP35.91■■■■□ 3.34
CCM2-219ENST00000544363 CXCL9Q07325 125 aa35.91■■■■□ 3.34
CCM2-219ENST00000544363 CDC42EP5Q6NZY7 148 aa35.91■■■■□ 3.34
CCM2-219ENST00000544363 TOMM22Q9NS69 142 aa35.91■■■■□ 3.34
CCM2-219ENST00000544363 SYT17Q9BSW7 474 aa35.9■■■■□ 3.34
CCM2-219ENST00000544363 CWC22Q9HCG8 908 aaKnown RBP35.9■■■■□ 3.34
CCM2-219ENST00000544363 ZSWIM5Q9P217 1185 aa35.9■■■■□ 3.34
CCM2-219ENST00000544363 FOCADQ5VW36 1801 aa35.9■■■■□ 3.34
CCM2-219ENST00000544363 KDM4AO75164 1064 aa35.9■■■■□ 3.34
CCM2-219ENST00000544363 RBM5P52756 815 aaKnown RBP eCLIP35.9■■■■□ 3.34
CCM2-219ENST00000544363 RRP12Q5JTH9 1297 aaKnown RBP35.9■■■■□ 3.34
CCM2-219ENST00000544363 EVX2Q03828 476 aa35.89■■■■□ 3.34
CCM2-219ENST00000544363 CIAPIN1Q6FI81 312 aa35.89■■■■□ 3.34
CCM2-219ENST00000544363 AGBL3Q8NEM8 1001 aa35.89■■■■□ 3.34
CCM2-219ENST00000544363 TMEM87BQ96K49 555 aa35.88■■■■□ 3.33
CCM2-219ENST00000544363 CHMP5Q9NZZ3 219 aa35.88■■■■□ 3.33
CCM2-219ENST00000544363 WDHD1O75717 1129 aaPredicted RBP35.87■■■■□ 3.33
CCM2-219ENST00000544363 POLR3DP05423 398 aaPredicted RBP35.87■■■■□ 3.33
CCM2-219ENST00000544363 PRELPP51888 382 aa35.87■■■■□ 3.33
CCM2-219ENST00000544363 APOBRQ0VD83 1088 aa35.87■■■■□ 3.33
CCM2-219ENST00000544363 SAP30BPQ9UHR5 308 aaKnown RBP35.87■■■■□ 3.33
CCM2-219ENST00000544363 CIZ1Q9ULV3 898 aaPredicted RBP35.87■■■■□ 3.33
CCM2-219ENST00000544363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP35.87■■■■□ 3.33
CCM2-219ENST00000544363 PCDHAC2Q9Y5I4 1007 aa35.87■■■■□ 3.33
CCM2-219ENST00000544363 DDX60LQ5H9U9 1706 aaKnown RBP35.87■■■■□ 3.33
CCM2-219ENST00000544363 CCDC83Q8IWF9 413 aa35.86■■■■□ 3.33
CCM2-219ENST00000544363 ESR2Q92731 530 aa35.86■■■■□ 3.33
CCM2-219ENST00000544363 GPHNQ9NQX3 736 aaPredicted RBP35.86■■■■□ 3.33
CCM2-219ENST00000544363 HDAC9Q9UKV0 1011 aa35.86■■■■□ 3.33
CCM2-219ENST00000544363 ZBTB12Q9Y330 459 aaPredicted RBP35.86■■■■□ 3.33
CCM2-219ENST00000544363 ROBO3Q96MS0 1386 aa35.86■■■■□ 3.33
CCM2-219ENST00000544363 ORC4O43929 436 aa35.86■■■■□ 3.33
CCM2-219ENST00000544363 EVCP57679 992 aa35.86■■■■□ 3.33
CCM2-219ENST00000544363 CFAP100Q494V2 611 aa35.86■■■■□ 3.33
CCM2-219ENST00000544363 PDE4BQ07343 736 aa35.85■■■■□ 3.33
CCM2-219ENST00000544363 TNIP1Q15025 636 aa35.85■■■■□ 3.33
CCM2-219ENST00000544363 SLC4A8Q2Y0W8 1093 aa35.85■■■■□ 3.33
CCM2-219ENST00000544363 NECAB1Q8N987 351 aa35.85■■■■□ 3.33
CCM2-219ENST00000544363 ZSCAN21Q9Y5A6 473 aaPredicted RBP35.85■■■■□ 3.33
CCM2-219ENST00000544363 SH2B2O14492 632 aaPredicted RBP35.84■■■■□ 3.33
CCM2-219ENST00000544363 ST3GAL1Q11201 340 aa35.84■■■■□ 3.33
CCM2-219ENST00000544363 MTA3Q9BTC8 594 aa35.84■■■■□ 3.33
CCM2-219ENST00000544363 ANGEL1Q9UNK9 670 aaKnown RBP35.84■■■■□ 3.33
CCM2-219ENST00000544363 PLCD1P51178 756 aa35.83■■■■□ 3.33
CCM2-219ENST00000544363 PICALMQ13492 652 aa35.83■■■■□ 3.33
CCM2-219ENST00000544363 OGFOD1Q8N543 542 aa35.83■■■■□ 3.33
CCM2-219ENST00000544363 IGDCC4Q8TDY8 1250 aa35.83■■■■□ 3.33
CCM2-219ENST00000544363 ZNF274Q96GC6 653 aaPredicted RBP35.83■■■■□ 3.33
CCM2-219ENST00000544363 DDX4Q9NQI0 724 aaKnown RBP35.83■■■■□ 3.33
CCM2-219ENST00000544363 ECM29Q5VYK3 1845 aa35.83■■■■□ 3.33
CCM2-219ENST00000544363 MYH1P12882 1939 aa35.83■■■■□ 3.33
CCM2-219ENST00000544363 ARHGAP27Q6ZUM4 889 aa35.83■■■■□ 3.33
CCM2-219ENST00000544363 PRDM1O75626 825 aa35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms