RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 NCBP1Q09161 790 aaKnown RBP17.45■□□□□ 0.38
CHFR-223ENST00000544268 USP28Q96RU2 1077 aa17.45■□□□□ 0.38
CHFR-223ENST00000544268 CBX8Q9HC52 389 aa17.45■□□□□ 0.38
CHFR-223ENST00000544268 PYCARDQ9ULZ3 195 aa17.45■□□□□ 0.38
CHFR-223ENST00000544268 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
CHFR-223ENST00000544268 DNAJC25Q9H1X3 360 aa17.44■□□□□ 0.38
CHFR-223ENST00000544268 MORC2Q9Y6X9 1032 aaPredicted RBP17.44■□□□□ 0.38
CHFR-223ENST00000544268 MMP10P09238 476 aa17.43■□□□□ 0.38
CHFR-223ENST00000544268 KLRK1P26718 216 aa17.43■□□□□ 0.38
CHFR-223ENST00000544268 TTF1Q15361 905 aaPredicted RBP17.43■□□□□ 0.38
CHFR-223ENST00000544268 SLC15A2Q16348 729 aa17.43■□□□□ 0.38
CHFR-223ENST00000544268 IQSEC3Q9UPP2 1182 aaPredicted RBP17.43■□□□□ 0.38
CHFR-223ENST00000544268 MYH7P12883 1935 aa17.43■□□□□ 0.38
CHFR-223ENST00000544268 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
CHFR-223ENST00000544268 ZFYP08048 801 aaPredicted RBP17.43■□□□□ 0.38
CHFR-223ENST00000544268 LRRFIP1Q32MZ4 808 aaKnown RBP17.43■□□□□ 0.38
CHFR-223ENST00000544268 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
CHFR-223ENST00000544268 FBXW7Q969H0 707 aa17.43■□□□□ 0.38
CHFR-223ENST00000544268 ANKRD2Q9GZV1 360 aa17.43■□□□□ 0.38
CHFR-223ENST00000544268 IDH1O75874 414 aaKnown RBP17.42■□□□□ 0.38
CHFR-223ENST00000544268 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
CHFR-223ENST00000544268 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
CHFR-223ENST00000544268 NRBP1Q9UHY1 535 aa17.42■□□□□ 0.38
CHFR-223ENST00000544268 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
CHFR-223ENST00000544268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHFR-223ENST00000544268 FAM200AQ8TCP9 573 aa17.42■□□□□ 0.38
CHFR-223ENST00000544268 FAM84BQ96KN1 310 aaPredicted RBP17.42■□□□□ 0.38
CHFR-223ENST00000544268 AGXT2Q9BYV1 514 aa17.42■□□□□ 0.38
CHFR-223ENST00000544268 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHFR-223ENST00000544268 SALL1Q9NSC2 1324 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 TERF2Q15554 542 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 SLC9C2Q5TAH2 1124 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 TIGD1Q96MW7 591 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 KLRG2A4D1S0 409 aaPredicted RBP17.41■□□□□ 0.38
CHFR-223ENST00000544268 RXRAP19793 462 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 ANTXR2P58335 489 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 CAVIN4Q5BKX8 364 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
CHFR-223ENST00000544268 WWC3Q9ULE0 1092 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 NRXN2Q9P2S2 1712 aa17.41■□□□□ 0.38
CHFR-223ENST00000544268 HMGB1P09429 215 aaKnown RBP17.4■□□□□ 0.38
CHFR-223ENST00000544268 PTGS1P23219 599 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 ADD2P35612 726 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 APPBP2Q92624 585 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 NBPF3Q9H094 633 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 STK32BQ9NY57 414 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 GPAA1O43292 621 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 POLR3DP05423 398 aaPredicted RBP17.4■□□□□ 0.38
CHFR-223ENST00000544268 VPS37DQ86XT2 251 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 SENP2Q9HC62 589 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 PARP3Q9Y6F1 533 aa17.4■□□□□ 0.38
CHFR-223ENST00000544268 COL1A1P02452 1464 aaPredicted RBP17.39■□□□□ 0.37
CHFR-223ENST00000544268 GOLGA6L6A8MZA4 724 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 HOXA10P31260 410 aaPredicted RBP17.39■□□□□ 0.37
CHFR-223ENST00000544268 BAG6P46379 1132 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 LRMPQ12912 555 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 C11orf57Q6ZUT1 292 aaPredicted RBP17.39■□□□□ 0.37
CHFR-223ENST00000544268 TXNRD3Q86VQ6 643 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 CCAR1Q8IX12 1150 aaKnown RBP17.39■□□□□ 0.37
CHFR-223ENST00000544268 CNPY4Q8N129 248 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 BRIP1Q9BX63 1249 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 GNL3LQ9NVN8 582 aaKnown RBP17.39■□□□□ 0.37
CHFR-223ENST00000544268 PRC1O43663 620 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 PDE6AP16499 860 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 ZSCAN25Q6NSZ9 544 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 FBXO33Q7Z6M2 555 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 AIFM3Q96NN9 605 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 HPS5Q9UPZ3 1129 aa17.39■□□□□ 0.37
CHFR-223ENST00000544268 ZNF532Q9HCE3 1301 aa17.38■□□□□ 0.37
CHFR-223ENST00000544268 KLF18A0A0U1RQI7 1052 aa17.38■□□□□ 0.37
CHFR-223ENST00000544268 SMTNL1A8MU46 457 aa17.38■□□□□ 0.37
CHFR-223ENST00000544268 MMP14P50281 582 aa17.38■□□□□ 0.37
CHFR-223ENST00000544268 LLPHQ9BRT6 129 aaKnown RBP17.38■□□□□ 0.37
CHFR-223ENST00000544268 DDX19AQ9NUU7 478 aaKnown RBP17.38■□□□□ 0.37
CHFR-223ENST00000544268 DOCK2Q92608 1830 aa17.38■□□□□ 0.37
CHFR-223ENST00000544268 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
CHFR-223ENST00000544268 FAM193AP78312 1265 aa17.38■□□□□ 0.37
CHFR-223ENST00000544268 SNW1Q13573 536 aaKnown RBP17.38■□□□□ 0.37
CHFR-223ENST00000544268 UBE3CQ15386 1083 aa17.38■□□□□ 0.37
CHFR-223ENST00000544268 RBM43Q6ZSC3 357 aaKnown RBP17.38■□□□□ 0.37
CHFR-223ENST00000544268 ZSCAN16Q9H4T2 348 aaPredicted RBP17.38■□□□□ 0.37
CHFR-223ENST00000544268 GOLGB1Q14789 3259 aaKnown RBP17.37■□□□□ 0.37
CHFR-223ENST00000544268 IRS2Q9Y4H2 1338 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 TCRBV5S4A2TA0A5A2 114 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 MB21D2Q8IYB1 491 aaPredicted RBP17.37■□□□□ 0.37
CHFR-223ENST00000544268 KIF18AQ8NI77 898 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 CRAMP1Q96RY5 1269 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 XDHP47989 1333 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 HIBADHP31937 336 aaKnown RBP17.37■□□□□ 0.37
CHFR-223ENST00000544268 ZNF165P49910 485 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 GPSM2P81274 684 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 MAP3K12Q12852 859 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 TBC1D10CQ8IV04 446 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 CCDC144CPQ8IYA2 1237 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 MAGEB6Q8N7X4 407 aa17.37■□□□□ 0.37
CHFR-223ENST00000544268 PDGFDQ9GZP0 370 aaPredicted RBP17.37■□□□□ 0.37
CHFR-223ENST00000544268 CALCOCO1Q9P1Z2 691 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms