RNA–Protein interactions for RNA: ENST00000543814.5

PAAF1-213, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-213ENST00000543814 SCYL3Q8IZE3 742 aa21.37■■□□□ 1.01
PAAF1-213ENST00000543814 OGDHLQ9ULD0 1010 aa21.37■■□□□ 1.01
PAAF1-213ENST00000543814 ANKRD13CQ8N6S4 541 aa21.36■■□□□ 1.01
PAAF1-213ENST00000543814 PICK1Q9NRD5 415 aa21.36■■□□□ 1.01
PAAF1-213ENST00000543814 FAM198AQ9UFP1 575 aa21.36■■□□□ 1.01
PAAF1-213ENST00000543814 ATRNL1Q5VV63 1379 aa21.36■■□□□ 1.01
PAAF1-213ENST00000543814 COL2A1P02458 1487 aaPredicted RBP21.35■■□□□ 1.01
PAAF1-213ENST00000543814 TRIM32Q13049 653 aa21.35■■□□□ 1.01
PAAF1-213ENST00000543814 DAGLAQ9Y4D2 1042 aa21.35■■□□□ 1.01
PAAF1-213ENST00000543814 PFASO15067 1338 aa21.34■■□□□ 1.01
PAAF1-213ENST00000543814 FAM110CQ1W6H9 321 aa21.34■■□□□ 1.01
PAAF1-213ENST00000543814 VGLL2Q8N8G2 317 aa21.34■■□□□ 1.01
PAAF1-213ENST00000543814 GJD2Q9UKL4 321 aa21.34■■□□□ 1.01
PAAF1-213ENST00000543814 PDE8BO95263 885 aa21.33■■□□□ 1.01
PAAF1-213ENST00000543814 LRRC24Q50LG9 513 aa21.33■■□□□ 1.01
PAAF1-213ENST00000543814 ZFPM1Q8IX07 1006 aa21.33■■□□□ 1.01
PAAF1-213ENST00000543814 KAZALD1Q96I82 304 aa21.33■■□□□ 1.01
PAAF1-213ENST00000543814 C9orf78Q9NZ63 289 aaPredicted RBP21.33■■□□□ 1.01
PAAF1-213ENST00000543814 AGTPBP1Q9UPW5 1226 aa21.33■■□□□ 1.01
PAAF1-213ENST00000543814 AK9Q5TCS8 1911 aa21.33■■□□□ 1
PAAF1-213ENST00000543814 CACNA1FO60840 1977 aa21.32■■□□□ 1
PAAF1-213ENST00000543814 PTPRFP10586 1907 aa21.32■■□□□ 1
PAAF1-213ENST00000543814 METTL24Q5JXM2 366 aa21.32■■□□□ 1
PAAF1-213ENST00000543814 DOCK3Q8IZD9 2030 aa21.32■■□□□ 1
PAAF1-213ENST00000543814 KIF16BQ96L93 1317 aa21.31■■□□□ 1
PAAF1-213ENST00000543814 COL6A1P12109 1028 aa21.31■■□□□ 1
PAAF1-213ENST00000543814 MAP3K10Q02779 954 aa21.31■■□□□ 1
PAAF1-213ENST00000543814 DIXDC1Q155Q3 683 aa21.31■■□□□ 1
PAAF1-213ENST00000543814 WDR66Q8TBY9 1149 aa21.31■■□□□ 1
PAAF1-213ENST00000543814 FAM161BQ96MY7 647 aa21.31■■□□□ 1
PAAF1-213ENST00000543814 USP40Q9NVE5 1235 aa21.31■■□□□ 1
PAAF1-213ENST00000543814 TRIM75PA6NK02 468 aa21.3■■□□□ 1
PAAF1-213ENST00000543814 VAMP4O75379 141 aa21.3■■□□□ 1
PAAF1-213ENST00000543814 MDM2Q00987 491 aaPredicted RBP21.3■■□□□ 1
PAAF1-213ENST00000543814 CCDC27Q2M243 656 aa21.3■■□□□ 1
PAAF1-213ENST00000543814 SUCLG2Q96I99 432 aa21.3■■□□□ 1
PAAF1-213ENST00000543814 PNMA3Q9UL41 463 aa21.3■■□□□ 1
PAAF1-213ENST00000543814 SPTBN5Q9NRC6 3674 aaKnown RBP21.3■■□□□ 1
PAAF1-213ENST00000543814 PHIPQ8WWQ0 1821 aa21.29■■□□□ 1
PAAF1-213ENST00000543814 TREML2Q5T2D2 321 aa21.29■■□□□ 1
PAAF1-213ENST00000543814 MAP3K21Q5TCX8 1036 aa21.29■■□□□ 1
PAAF1-213ENST00000543814 WWC1Q8IX03 1113 aa21.29■■□□□ 1
PAAF1-213ENST00000543814 VCANP13611 3396 aa21.29■■□□□ 1
PAAF1-213ENST00000543814 DOCK2Q92608 1830 aa21.28■■□□□ 1
PAAF1-213ENST00000543814 CTNND1O60716 968 aaKnown RBP21.28■■□□□ 1
PAAF1-213ENST00000543814 ALDH1L1O75891 902 aa21.28■■□□□ 1
PAAF1-213ENST00000543814 FGFR2P21802 821 aa21.28■■□□□ 1
PAAF1-213ENST00000543814 GCLCP48506 637 aaPredicted RBP21.28■■□□□ 1
PAAF1-213ENST00000543814 LRRC26Q2I0M4 334 aa21.28■■□□□ 1
PAAF1-213ENST00000543814 TRIB2Q92519 343 aa21.28■■□□□ 1
PAAF1-213ENST00000543814 LRRFIP2Q9Y608 721 aaKnown RBP21.28■■□□□ 1
PAAF1-213ENST00000543814 IL16Q14005 1332 aa21.28■■□□□ 1
PAAF1-213ENST00000543814 IFIT1P09914 478 aaKnown RBP21.27■■□□□ 1
PAAF1-213ENST00000543814 SH3BP5LQ7L8J4 393 aa21.27■■□□□ 1
PAAF1-213ENST00000543814 IDI2Q9BXS1 227 aa21.27■■□□□ 1
PAAF1-213ENST00000543814 DOCK1Q14185 1865 aa21.26■□□□□ 0.99
PAAF1-213ENST00000543814 ENTPD3O75355 529 aa21.26■□□□□ 0.99
PAAF1-213ENST00000543814 PRDX5P30044 214 aa21.26■□□□□ 0.99
PAAF1-213ENST00000543814 RGS3P49796 1198 aa21.26■□□□□ 0.99
PAAF1-213ENST00000543814 DDX10Q13206 875 aaKnown RBP21.26■□□□□ 0.99
PAAF1-213ENST00000543814 RABL6Q3YEC7 729 aaPredicted RBP21.26■□□□□ 0.99
PAAF1-213ENST00000543814 ZNF697Q5TEC3 545 aa21.26■□□□□ 0.99
PAAF1-213ENST00000543814 PROCA1Q8NCQ7 364 aaPredicted RBP21.26■□□□□ 0.99
PAAF1-213ENST00000543814 CDX2Q99626 313 aaPredicted RBP21.26■□□□□ 0.99
PAAF1-213ENST00000543814 PLXNB2O15031 1838 aa21.25■□□□□ 0.99
PAAF1-213ENST00000543814 NBPF7P0C2Y1 421 aaPredicted RBP21.25■□□□□ 0.99
PAAF1-213ENST00000543814 SLURP2P0DP57 97 aa21.25■□□□□ 0.99
PAAF1-213ENST00000543814 PRKAR2AP13861 404 aaKnown RBP21.25■□□□□ 0.99
PAAF1-213ENST00000543814 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
PAAF1-213ENST00000543814 PUM3Q15397 648 aaKnown RBP21.25■□□□□ 0.99
PAAF1-213ENST00000543814 CCDC84Q86UT8 332 aaPredicted RBP21.25■□□□□ 0.99
PAAF1-213ENST00000543814 MAFAQ8NHW3 353 aaPredicted RBP21.25■□□□□ 0.99
PAAF1-213ENST00000543814 SRCIN1Q9C0H9 1055 aa21.25■□□□□ 0.99
PAAF1-213ENST00000543814 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
PAAF1-213ENST00000543814 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.25■□□□□ 0.99
PAAF1-213ENST00000543814 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
PAAF1-213ENST00000543814 BICC1Q9H694 974 aaKnown RBP21.24■□□□□ 0.99
PAAF1-213ENST00000543814 UTYO14607 1347 aa21.24■□□□□ 0.99
PAAF1-213ENST00000543814 DDTLA6NHG4 134 aaPredicted RBP21.23■□□□□ 0.99
PAAF1-213ENST00000543814 LDHBP07195 334 aaKnown RBP21.23■□□□□ 0.99
PAAF1-213ENST00000543814 ZSCAN29Q8IWY8 852 aaPredicted RBP21.23■□□□□ 0.99
PAAF1-213ENST00000543814 RFX7Q2KHR2 1363 aa21.23■□□□□ 0.99
PAAF1-213ENST00000543814 MYH13Q9UKX3 1938 aa21.22■□□□□ 0.99
PAAF1-213ENST00000543814 XRCC5P13010 732 aaKnown RBP21.22■□□□□ 0.99
PAAF1-213ENST00000543814 CYP2B6P20813 491 aa21.22■□□□□ 0.99
PAAF1-213ENST00000543814 LHX8Q68G74 356 aa21.22■□□□□ 0.99
PAAF1-213ENST00000543814 ANKRD44Q8N8A2 993 aa21.22■□□□□ 0.99
PAAF1-213ENST00000543814 KLHDC4Q8TBB5 520 aa21.22■□□□□ 0.99
PAAF1-213ENST00000543814 SYMPKQ92797 1274 aaKnown RBP21.22■□□□□ 0.99
PAAF1-213ENST00000543814 LBHD1Q9BQE6 289 aaPredicted RBP21.22■□□□□ 0.99
PAAF1-213ENST00000543814 PRKRIP1Q9H875 184 aaPredicted RBP21.22■□□□□ 0.99
PAAF1-213ENST00000543814 MORF4L1Q9UBU8 362 aa21.22■□□□□ 0.99
PAAF1-213ENST00000543814 EYSQ5T1H1 3165 aa21.22■□□□□ 0.99
PAAF1-213ENST00000543814 LOC285556D6RIA3 1793 aa21.21■□□□□ 0.99
PAAF1-213ENST00000543814 COL9A1P20849 921 aa21.21■□□□□ 0.99
PAAF1-213ENST00000543814 PABPC4Q13310 644 aaKnown RBP eCLIP21.21■□□□□ 0.99
PAAF1-213ENST00000543814 SLC4A10Q6U841 1118 aa21.21■□□□□ 0.99
PAAF1-213ENST00000543814 ASCC2Q9H1I8 757 aaPredicted RBP21.21■□□□□ 0.99
PAAF1-213ENST00000543814 SEMA6BQ9H3T3 888 aa21.21■□□□□ 0.99
PAAF1-213ENST00000543814 EXOSC9Q06265 439 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms