RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 ILDR1Q86SU0 546 aaPredicted RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 EHBP1Q8NDI1 1231 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 SPDYE1Q8NFV5 336 aaPredicted RBP5.68□□□□□ -1.5
LMO3-229ENST00000543721 CHPF2Q9P2E5 772 aa5.68□□□□□ -1.5
LMO3-229ENST00000543721 CEMIPQ8WUJ3 1361 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 CCT2P78371 535 aaKnown RBP5.67□□□□□ -1.5
LMO3-229ENST00000543721 GIMAP7Q8NHV1 300 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 HAUS7Q99871 368 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.67□□□□□ -1.5
LMO3-229ENST00000543721 PA2G4Q9UQ80 394 aaKnown RBP5.67□□□□□ -1.5
LMO3-229ENST00000543721 GOLGA8KD6RF30 607 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 ZNF18P17022 549 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 FOSBP53539 338 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 GUCY1B3Q02153 619 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 DDR1Q08345 913 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 NEXNQ0ZGT2 675 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 NBPF14Q5TI25 921 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 RESP18Q5W5W9 173 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 TXNDC2Q86VQ3 553 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 KBTBD3Q8NAB2 608 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 CABS1Q96KC9 395 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 PNKPQ96T60 521 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 COPRSQ9NQ92 184 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 MAP3K2Q9Y2U5 619 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 NFE2L3Q9Y4A8 694 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 PALLDQ8WX93 1383 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 PLEKHG1Q9ULL1 1385 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 A0A1B0GTH6 734 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 TMEM232C9JQI7 657 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 PRPF6O94906 941 aaKnown RBP5.67□□□□□ -1.5
LMO3-229ENST00000543721 CLSTN1O94985 981 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 RHOXF2BP0C7M4 288 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 FECHP22830 423 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 USP14P54578 494 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 VSNL1P62760 191 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 KIF23Q02241 960 aaPredicted RBP5.67□□□□□ -1.5
LMO3-229ENST00000543721 TEFQ10587 303 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 NR1I3Q14994 352 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 CNPY4Q8N129 248 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 COG1Q8WTW3 980 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 RHOXF2Q9BQY4 288 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 ZSWIM4Q9H7M6 989 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 WWC3Q9ULE0 1092 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 MYO6Q9UM54 1294 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 TAF6LQ9Y6J9 622 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 FAM169AQ9Y6X4 670 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 ITIH6Q6UXX5 1313 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 PRR36Q9H6K5 1346 aa5.67□□□□□ -1.5
LMO3-229ENST00000543721 KDM6AO15550 1401 aaPredicted RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 E7EWF7 191 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 POLR3DP05423 398 aaPredicted RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 HNRNPH1P31943 449 aaKnown RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 ADKP55263 362 aaKnown RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 SPAG1Q07617 926 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 TRIM29Q14134 588 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 NT5DC1Q5TFE4 455 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 CCDC50Q8IVM0 306 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 LZTFL1Q9NQ48 299 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 RBM28Q9NW13 759 aaKnown RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 KCNH3Q9ULD8 1083 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 CDHR2Q9BYE9 1310 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 TOPAZ1Q8N9V7 1692 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 GOLGA6CA6NDK9 693 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 H0YHG0 523 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 CHUKO15111 745 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 GOLGA6DP0CG33 693 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 FDPSP14324 419 aaKnown RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 TDO2P48775 406 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 NEDD9Q14511 834 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 FOXR1Q6PIV2 292 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 CYP26C1Q6V0L0 522 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 ZBTB9Q96C00 473 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.66□□□□□ -1.5
LMO3-229ENST00000543721 MRPL44Q9H9J2 332 aaKnown RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 GOLGA6AQ9NYA3 693 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 HPCAL4Q9UM19 191 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 PCDHA5Q9Y5H7 936 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 WDR17Q8IZU2 1322 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 ZNF609O15014 1411 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 EXOC5O00471 708 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 C21orf2O43822 256 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 N4BP1O75113 896 aaKnown RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 ERCC3P19447 782 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 PLCD1P51178 756 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 SATB1Q01826 763 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 APBA1Q02410 837 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 DRP2Q13474 957 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 SART3Q15020 963 aaKnown RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 PLCB4Q15147 1175 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 TNNI3KQ59H18 835 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 STOX1Q6ZVD7 989 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 YTHDF3Q7Z739 585 aaKnown RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 AMOTL1Q8IY63 956 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 SLC35F6Q8N357 371 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 IGSF22Q8N9C0 903 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 KRI1Q8N9T8 703 aaKnown RBP5.66□□□□□ -1.5
LMO3-229ENST00000543721 WASF1Q92558 559 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 SUCLG2Q96I99 432 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 CAPS2Q9BXY5 557 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 LRRC2Q9BYS8 371 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms