RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	PPEF1	O14829	653 aa	Predicted RBP	13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	ANTXR2	P58335	489 aa		13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	HAND2	P61296	217 aa		13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	CCT2	P78371	535 aa	Known RBP	13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	TRDN	Q13061	729 aa		13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	SF3B3	Q15393	1217 aa	Known RBP	13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	CHADL	Q6NUI6	762 aa		13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	ZSCAN30	Q86W11	494 aa		13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	HELB	Q8NG08	1087 aa	Predicted RBP	13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	DDX11	Q96FC9	970 aa		13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	ZNF396	Q96N95	335 aa	Predicted RBP	13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	GOLGA6L4	A6NEF3	574 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	BBOX1	O75936	387 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	GNAT2	P19087	354 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	RASGRF1	Q13972	1273 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	FAM173B	Q6P4H8	233 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	C3orf67	Q6ZVT6	689 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	AIDA	Q96BJ3	306 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	STRBP	Q96SI9	672 aa	Known RBP	13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	NUP62CL	Q9H1M0	184 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	CCDC39	Q9UFE4	941 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	FER1L6	Q2WGJ9	1857 aa		13.16	□□□□□ -0.3
LDHA-222	ENST00000543695	KLF18	A0A0U1RQI7	1052 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	PATL2	C9JE40	543 aa	Known RBP	13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	ADD1	P35611	737 aa	Known RBP	13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	EIF6	P56537	245 aa	Known RBP	13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	CHRND	Q07001	517 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	RBM43	Q6ZSC3	357 aa	Known RBP	13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	CHST3	Q7LGC8	479 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	LARGE2	Q8N3Y3	721 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	RNF214	Q8ND24	703 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	TMEM87B	Q96K49	555 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	NBPF3	Q9H094	633 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	CLSTN2	Q9H4D0	955 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	TFIP11	Q9UBB9	837 aa	Known RBP	13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	HACL1	Q9UJ83	578 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	ATP6V0A2	Q9Y487	856 aa		13.15	□□□□□ -0.3
LDHA-222	ENST00000543695	ZNF804B	A4D1E1	1349 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	ZNF541	Q9H0D2	1346 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	GOLGA8B	A8MQT2	603 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	SH2B2	O14492	632 aa	Predicted RBP	13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	CCDC192	P0DO97	292 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	FDPS	P14324	419 aa	Known RBP	13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	LIG1	P18858	919 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	UBE4A	Q14139	1066 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	MAP3K11	Q16584	847 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	PNMA8A	Q86V59	439 aa	Predicted RBP	13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	LDHD	Q86WU2	507 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	TBC1D10C	Q8IV04	446 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	ANKRD18A	Q8IVF6	992 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	GPC2	Q8N158	579 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	MAGEB6	Q8N7X4	407 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	PGBD1	Q96JS3	809 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	VPS33B	Q9H267	617 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	NCOA5	Q9HCD5	579 aa	Known RBP	13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	RCOR1	Q9UKL0	485 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	HPS5	Q9UPZ3	1129 aa		13.14	□□□□□ -0.31
LDHA-222	ENST00000543695	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	NID2	Q14112	1375 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	MBD4	O95243	580 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	POTEI	P0CG38	1075 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	POTEJ	P0CG39	1038 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	EAPP	Q56P03	285 aa	Predicted RBP	13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	GIMAP6	Q6P9H5	292 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	SP8	Q8IXZ3	490 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	IFNL3	Q8IZI9	196 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	SUPT20H	Q8NEM7	779 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	MTA3	Q9BTC8	594 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	CNNM2	Q9H8M5	875 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	GPHN	Q9NQX3	736 aa	Predicted RBP	13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	GNL3L	Q9NVN8	582 aa	Known RBP	13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	BSDC1	Q9NW68	430 aa	Predicted RBP	13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	NOL7	Q9UMY1	257 aa	Known RBP	13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	ANGEL1	Q9UNK9	670 aa	Known RBP	13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	CLEC11A	Q9Y240	323 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	MYH2	Q9UKX2	1941 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	WDR90	Q96KV7	1748 aa		13.13	□□□□□ -0.31
LDHA-222	ENST00000543695	ZBTB22	O15209	634 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	PPIP5K2	O43314	1243 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	CDKL5	O76039	1030 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	APP	P05067	770 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	MSN	P26038	577 aa	Known RBP	13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	EPHX2	P34913	555 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	CYB5R4	Q7L1T6	521 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	NIM1K	Q8IY84	436 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	JMY	Q8N9B5	988 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	BICD2	Q8TD16	824 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	NAPB	Q9H115	298 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	GJA3	Q9Y6H8	435 aa		13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	PDS5A	Q29RF7	1337 aa	Known RBP	13.12	□□□□□ -0.31
LDHA-222	ENST00000543695	CPLX1	O14810	134 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	CTAGE5	O15320	804 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	LMOD1	P29536	600 aa	Predicted RBP	13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	LIFR	P42702	1097 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	BCAM	P50895	628 aa		13.11	□□□□□ -0.31

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