RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 SH3BP5LQ7L8J4 393 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 ERO1BQ86YB8 467 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 ZNF296Q8WUU4 475 aaPredicted RBP17.5■□□□□ 0.39
VPS37B-204ENST00000543590 DDX4Q9NQI0 724 aaKnown RBP17.5■□□□□ 0.39
VPS37B-204ENST00000543590 ZNF112Q9UJU3 913 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 PICALMQ13492 652 aa17.49■□□□□ 0.39
VPS37B-204ENST00000543590 OTUD7BQ6GQQ9 843 aa17.49■□□□□ 0.39
VPS37B-204ENST00000543590 ZSCAN29Q8IWY8 852 aaPredicted RBP17.49■□□□□ 0.39
VPS37B-204ENST00000543590 PTPN18Q99952 460 aa17.49■□□□□ 0.39
VPS37B-204ENST00000543590 IL1RAPL2Q9NP60 686 aa17.49■□□□□ 0.39
VPS37B-204ENST00000543590 APBB1O00213 710 aa17.48■□□□□ 0.39
VPS37B-204ENST00000543590 MAP4K4O95819 1239 aaPredicted RBP17.48■□□□□ 0.39
VPS37B-204ENST00000543590 GTF2A2P52657 109 aa17.48■□□□□ 0.39
VPS37B-204ENST00000543590 BRI3BPQ8WY22 251 aa17.48■□□□□ 0.39
VPS37B-204ENST00000543590 PIH1D3Q9NQM4 214 aaKnown RBP17.48■□□□□ 0.39
VPS37B-204ENST00000543590 ATRNL1Q5VV63 1379 aa17.47■□□□□ 0.39
VPS37B-204ENST00000543590 DDTLA6NHG4 134 aaPredicted RBP17.47■□□□□ 0.39
VPS37B-204ENST00000543590 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
VPS37B-204ENST00000543590 CTU1Q7Z7A3 348 aaKnown RBP17.47■□□□□ 0.39
VPS37B-204ENST00000543590 KIF1BPQ96EK5 621 aa17.47■□□□□ 0.39
VPS37B-204ENST00000543590 CCL15-CCL14A0A0B4J2E2 113 aa17.46■□□□□ 0.39
VPS37B-204ENST00000543590 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
VPS37B-204ENST00000543590 CCL15Q16663 113 aa17.46■□□□□ 0.39
VPS37B-204ENST00000543590 CLASRPQ8N2M8 674 aaKnown RBP17.46■□□□□ 0.39
VPS37B-204ENST00000543590 NOL10Q9BSC4 688 aaKnown RBP17.46■□□□□ 0.39
VPS37B-204ENST00000543590 IRF6O14896 467 aa17.45■□□□□ 0.38
VPS37B-204ENST00000543590 IGSF3O75054 1194 aa17.45■□□□□ 0.38
VPS37B-204ENST00000543590 FKTNO75072 461 aa17.45■□□□□ 0.38
VPS37B-204ENST00000543590 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
VPS37B-204ENST00000543590 MAP3K10Q02779 954 aa17.45■□□□□ 0.38
VPS37B-204ENST00000543590 PPATQ06203 517 aa17.45■□□□□ 0.38
VPS37B-204ENST00000543590 PPIL2Q13356 520 aa17.45■□□□□ 0.38
VPS37B-204ENST00000543590 SH3RF3Q8TEJ3 882 aaPredicted RBP17.45■□□□□ 0.38
VPS37B-204ENST00000543590 DOCK2Q92608 1830 aa17.45■□□□□ 0.38
VPS37B-204ENST00000543590 CCDC85CA6NKD9 419 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 PHF20L1A8MW92 1017 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 CETPP11597 493 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 CRHR2Q13324 411 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 SNAPC2Q13487 334 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 NOL9Q5SY16 702 aaKnown RBP17.44■□□□□ 0.38
VPS37B-204ENST00000543590 ADGRA1Q86SQ6 560 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 TEX11Q8IYF3 940 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 AATFQ9NY61 560 aaKnown RBP eCLIP17.44■□□□□ 0.38
VPS37B-204ENST00000543590 NDUFB9Q9Y6M9 179 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 MYO5AQ9Y4I1 1855 aaKnown RBP17.44■□□□□ 0.38
VPS37B-204ENST00000543590 MAST2Q6P0Q8 1798 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 IDH1O75874 414 aaKnown RBP17.44■□□□□ 0.38
VPS37B-204ENST00000543590 BAG3O95817 575 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 SLURP2P0DP57 97 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 PPP4CP60510 307 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 ANTXR1Q9H6X2 564 aa17.44■□□□□ 0.38
VPS37B-204ENST00000543590 IFIT2P09913 472 aaKnown RBP17.43■□□□□ 0.38
VPS37B-204ENST00000543590 PLCG2P16885 1265 aa17.43■□□□□ 0.38
VPS37B-204ENST00000543590 FAM43AQ8N2R8 423 aa17.43■□□□□ 0.38
VPS37B-204ENST00000543590 OSBPL5Q9H0X9 879 aaPredicted RBP17.43■□□□□ 0.38
VPS37B-204ENST00000543590 BCL11AQ9H165 835 aa17.43■□□□□ 0.38
VPS37B-204ENST00000543590 CYP7A1P22680 504 aa17.42■□□□□ 0.38
VPS37B-204ENST00000543590 SCYL3Q8IZE3 742 aa17.42■□□□□ 0.38
VPS37B-204ENST00000543590 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
VPS37B-204ENST00000543590 KCNH4Q9UQ05 1017 aa17.42■□□□□ 0.38
VPS37B-204ENST00000543590 COL2A1P02458 1487 aaPredicted RBP17.42■□□□□ 0.38
VPS37B-204ENST00000543590 BTBD19C9JJ37 291 aa17.41■□□□□ 0.38
VPS37B-204ENST00000543590 TBC1D12O60347 775 aa17.41■□□□□ 0.38
VPS37B-204ENST00000543590 TAF1CQ15572 869 aaPredicted RBP17.41■□□□□ 0.38
VPS37B-204ENST00000543590 PKN2Q16513 984 aaKnown RBP17.41■□□□□ 0.38
VPS37B-204ENST00000543590 FAM196BA6NMK8 535 aa17.4■□□□□ 0.38
VPS37B-204ENST00000543590 CTNND1O60716 968 aaKnown RBP17.4■□□□□ 0.38
VPS37B-204ENST00000543590 MAP3K12Q12852 859 aa17.4■□□□□ 0.38
VPS37B-204ENST00000543590 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
VPS37B-204ENST00000543590 TGFBRAP1Q8WUH2 860 aa17.4■□□□□ 0.38
VPS37B-204ENST00000543590 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.4■□□□□ 0.38
VPS37B-204ENST00000543590 ZFYVE28Q9HCC9 887 aa17.4■□□□□ 0.38
VPS37B-204ENST00000543590 PICK1Q9NRD5 415 aa17.4■□□□□ 0.38
VPS37B-204ENST00000543590 PTPRAP18433 802 aa17.39■□□□□ 0.37
VPS37B-204ENST00000543590 DYNLL1P63167 89 aaKnown RBP17.39■□□□□ 0.37
VPS37B-204ENST00000543590 MAPKAPK5Q8IW41 473 aa17.39■□□□□ 0.37
VPS37B-204ENST00000543590 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.39■□□□□ 0.37
VPS37B-204ENST00000543590 ZCCHC17Q9NP64 241 aaKnown RBP17.39■□□□□ 0.37
VPS37B-204ENST00000543590 ZHX2Q9Y6X8 837 aa17.39■□□□□ 0.37
VPS37B-204ENST00000543590 CXCL11O14625 94 aa17.38■□□□□ 0.37
VPS37B-204ENST00000543590 RRP1P56182 461 aaKnown RBP17.38■□□□□ 0.37
VPS37B-204ENST00000543590 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
VPS37B-204ENST00000543590 TMED8Q6PL24 325 aaPredicted RBP17.38■□□□□ 0.37
VPS37B-204ENST00000543590 MIGA1Q8NAN2 632 aa17.38■□□□□ 0.37
VPS37B-204ENST00000543590 LRRCC1Q9C099 1032 aa17.38■□□□□ 0.37
VPS37B-204ENST00000543590 DHX36Q9H2U1 1008 aaKnown RBP17.38■□□□□ 0.37
VPS37B-204ENST00000543590 PI4KBQ9UBF8 816 aa17.38■□□□□ 0.37
VPS37B-204ENST00000543590 FLT1P17948 1338 aa17.38■□□□□ 0.37
VPS37B-204ENST00000543590 SP3Q02447 781 aa17.37■□□□□ 0.37
VPS37B-204ENST00000543590 MOGSQ13724 837 aa17.37■□□□□ 0.37
VPS37B-204ENST00000543590 ERO1AQ96HE7 468 aa17.37■□□□□ 0.37
VPS37B-204ENST00000543590 DNAJC2Q99543 621 aaKnown RBP17.37■□□□□ 0.37
VPS37B-204ENST00000543590 GOLIM4O00461 696 aa17.37■□□□□ 0.37
VPS37B-204ENST00000543590 SMARCA5O60264 1052 aaPredicted RBP17.37■□□□□ 0.37
VPS37B-204ENST00000543590 FBXO46Q6PJ61 603 aaPredicted RBP17.37■□□□□ 0.37
VPS37B-204ENST00000543590 ANKRD23Q86SG2 305 aa17.37■□□□□ 0.37
VPS37B-204ENST00000543590 CD99L2Q8TCZ2 262 aa17.37■□□□□ 0.37
VPS37B-204ENST00000543590 HERC5Q9UII4 1024 aaKnown RBP17.37■□□□□ 0.37
VPS37B-204ENST00000543590 HPS5Q9UPZ3 1129 aa17.37■□□□□ 0.37
VPS37B-204ENST00000543590 AFG3L2Q9Y4W6 797 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms