RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 PRDX5P30044 214 aa22.91■■□□□ 1.26
RAP1B-229ENST00000543393 IRF5Q13568 498 aa22.91■■□□□ 1.26
RAP1B-229ENST00000543393 GADL1Q6ZQY3 521 aa22.91■■□□□ 1.26
RAP1B-229ENST00000543393 SCYL3Q8IZE3 742 aa22.91■■□□□ 1.26
RAP1B-229ENST00000543393 PAK6Q9NQU5 681 aaPredicted RBP22.91■■□□□ 1.26
RAP1B-229ENST00000543393 DOCK2Q92608 1830 aa22.91■■□□□ 1.26
RAP1B-229ENST00000543393 PTPRFP10586 1907 aa22.9■■□□□ 1.26
RAP1B-229ENST00000543393 ATRNL1Q5VV63 1379 aa22.9■■□□□ 1.26
RAP1B-229ENST00000543393 SLC5A1P13866 664 aa22.9■■□□□ 1.26
RAP1B-229ENST00000543393 PAWRQ96IZ0 340 aaKnown RBP22.9■■□□□ 1.26
RAP1B-229ENST00000543393 CRISPLD2Q9H0B8 497 aa22.9■■□□□ 1.26
RAP1B-229ENST00000543393 SLC45A1Q9Y2W3 748 aa22.9■■□□□ 1.26
RAP1B-229ENST00000543393 AFG3L2Q9Y4W6 797 aa22.9■■□□□ 1.26
RAP1B-229ENST00000543393 PTPRAP18433 802 aa22.89■■□□□ 1.25
RAP1B-229ENST00000543393 LPIN2Q92539 896 aa22.89■■□□□ 1.25
RAP1B-229ENST00000543393 PICK1Q9NRD5 415 aa22.89■■□□□ 1.25
RAP1B-229ENST00000543393 TAOK2Q9UL54 1235 aa22.89■■□□□ 1.25
RAP1B-229ENST00000543393 SMCR8Q8TEV9 937 aaPredicted RBP22.88■■□□□ 1.25
RAP1B-229ENST00000543393 LDHBP07195 334 aaKnown RBP22.87■■□□□ 1.25
RAP1B-229ENST00000543393 DIS3LQ8TF46 1054 aaKnown RBP22.87■■□□□ 1.25
RAP1B-229ENST00000543393 PHIPQ8WWQ0 1821 aa22.87■■□□□ 1.25
RAP1B-229ENST00000543393 EYA2O00167 538 aa22.86■■□□□ 1.25
RAP1B-229ENST00000543393 RGS3P49796 1198 aa22.86■■□□□ 1.25
RAP1B-229ENST00000543393 NECAB2Q7Z6G3 386 aa22.86■■□□□ 1.25
RAP1B-229ENST00000543393 COA7Q96BR5 231 aa22.86■■□□□ 1.25
RAP1B-229ENST00000543393 GDF15Q99988 308 aa22.86■■□□□ 1.25
RAP1B-229ENST00000543393 DOCK1Q14185 1865 aa22.85■■□□□ 1.25
RAP1B-229ENST00000543393 MYH2Q9UKX2 1941 aa22.85■■□□□ 1.25
RAP1B-229ENST00000543393 BMP8BP34820 402 aa22.85■■□□□ 1.25
RAP1B-229ENST00000543393 MNX1P50219 401 aaPredicted RBP22.85■■□□□ 1.25
RAP1B-229ENST00000543393 ANKRD13CQ8N6S4 541 aa22.85■■□□□ 1.25
RAP1B-229ENST00000543393 IDI2Q9BXS1 227 aa22.85■■□□□ 1.25
RAP1B-229ENST00000543393 MRS2Q9HD23 443 aa22.85■■□□□ 1.25
RAP1B-229ENST00000543393 TRIM75PA6NK02 468 aa22.84■■□□□ 1.25
RAP1B-229ENST00000543393 ENTPD3O75355 529 aa22.84■■□□□ 1.25
RAP1B-229ENST00000543393 SLURP2P0DP57 97 aa22.84■■□□□ 1.25
RAP1B-229ENST00000543393 RFX5P48382 616 aaPredicted RBP22.84■■□□□ 1.25
RAP1B-229ENST00000543393 SH3BP5LQ7L8J4 393 aa22.84■■□□□ 1.25
RAP1B-229ENST00000543393 ZSCAN29Q8IWY8 852 aaPredicted RBP22.84■■□□□ 1.25
RAP1B-229ENST00000543393 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.84■■□□□ 1.258e-42■■■■■ 28.4
RAP1B-229ENST00000543393 USP44Q9H0E7 712 aa22.84■■□□□ 1.25
RAP1B-229ENST00000543393 LRRFIP2Q9Y608 721 aaKnown RBP22.84■■□□□ 1.25
RAP1B-229ENST00000543393 SALL1Q9NSC2 1324 aa22.83■■□□□ 1.25
RAP1B-229ENST00000543393 MAP3K10Q02779 954 aa22.83■■□□□ 1.25
RAP1B-229ENST00000543393 C7orf61Q8IZ16 206 aa22.83■■□□□ 1.25
RAP1B-229ENST00000543393 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.83■■□□□ 1.25
RAP1B-229ENST00000543393 ZMYND8Q9ULU4 1186 aaPredicted RBP22.83■■□□□ 1.25
RAP1B-229ENST00000543393 AGTPBP1Q9UPW5 1226 aa22.83■■□□□ 1.25
RAP1B-229ENST00000543393 CTNND1O60716 968 aaKnown RBP22.82■■□□□ 1.24
RAP1B-229ENST00000543393 GPR153Q6NV75 609 aa22.82■■□□□ 1.24
RAP1B-229ENST00000543393 ATG9AQ7Z3C6 839 aa22.82■■□□□ 1.24
RAP1B-229ENST00000543393 CCDC84Q86UT8 332 aaPredicted RBP22.82■■□□□ 1.24
RAP1B-229ENST00000543393 DEFB123Q8N688 67 aa22.82■■□□□ 1.24
RAP1B-229ENST00000543393 GNL3LQ9NVN8 582 aaKnown RBP22.82■■□□□ 1.24
RAP1B-229ENST00000543393 CUL9Q8IWT3 2517 aa22.81■■□□□ 1.24
RAP1B-229ENST00000543393 RFX7Q2KHR2 1363 aa22.81■■□□□ 1.24
RAP1B-229ENST00000543393 DDTLA6NHG4 134 aaPredicted RBP22.81■■□□□ 1.24
RAP1B-229ENST00000543393 FAM110CQ1W6H9 321 aa22.81■■□□□ 1.24
RAP1B-229ENST00000543393 ANKLE1Q8NAG6 615 aa22.81■■□□□ 1.24
RAP1B-229ENST00000543393 ATP2B3Q16720 1220 aa22.8■■□□□ 1.24
RAP1B-229ENST00000543393 TREML2Q5T2D2 321 aa22.8■■□□□ 1.24
RAP1B-229ENST00000543393 Q7L0L9 218 aa22.8■■□□□ 1.24
RAP1B-229ENST00000543393 MRPL50Q8N5N7 158 aaKnown RBP22.8■■□□□ 1.24
RAP1B-229ENST00000543393 DENND2AQ9ULE3 1009 aa22.8■■□□□ 1.24
RAP1B-229ENST00000543393 GAKO14976 1311 aa22.8■■□□□ 1.24
RAP1B-229ENST00000543393 HMGCRP04035 888 aa22.79■■□□□ 1.24
RAP1B-229ENST00000543393 DDX4Q9NQI0 724 aaKnown RBP22.79■■□□□ 1.24
RAP1B-229ENST00000543393 PNMA3Q9UL41 463 aa22.79■■□□□ 1.24
RAP1B-229ENST00000543393 SEMA3EO15041 775 aa22.78■■□□□ 1.24
RAP1B-229ENST00000543393 SYN1P17600 705 aa22.78■■□□□ 1.24
RAP1B-229ENST00000543393 PHKA1P46020 1223 aa22.78■■□□□ 1.24
RAP1B-229ENST00000543393 PICALMQ13492 652 aa22.78■■□□□ 1.24
RAP1B-229ENST00000543393 DDX60LQ5H9U9 1706 aaKnown RBP22.78■■□□□ 1.24
RAP1B-229ENST00000543393 NBPF3Q9H094 633 aa22.78■■□□□ 1.24
RAP1B-229ENST00000543393 SIL1Q9H173 461 aa22.78■■□□□ 1.24
RAP1B-229ENST00000543393 PTPRCP08575 1304 aa22.78■■□□□ 1.24
RAP1B-229ENST00000543393 LRIT3Q3SXY7 679 aa22.77■■□□□ 1.24
RAP1B-229ENST00000543393 HMX1Q9NP08 348 aaPredicted RBP22.77■■□□□ 1.24
RAP1B-229ENST00000543393 CEP126Q9P2H0 1117 aa22.77■■□□□ 1.24
RAP1B-229ENST00000543393 STXBP5LQ9Y2K9 1186 aa22.77■■□□□ 1.24
RAP1B-229ENST00000543393 RPTORQ8N122 1335 aa22.77■■□□□ 1.24
RAP1B-229ENST00000543393 MAGEA10P43363 369 aaPredicted RBP22.76■■□□□ 1.23
RAP1B-229ENST00000543393 TRIM32Q13049 653 aa22.76■■□□□ 1.23
RAP1B-229ENST00000543393 DZIP1Q86YF9 867 aaKnown RBP22.76■■□□□ 1.23
RAP1B-229ENST00000543393 TDHQ8IZJ6 230 aa22.76■■□□□ 1.23
RAP1B-229ENST00000543393 ZGPATQ8N5A5 531 aaKnown RBP22.76■■□□□ 1.23
RAP1B-229ENST00000543393 PROCA1Q8NCQ7 364 aaPredicted RBP22.76■■□□□ 1.23
RAP1B-229ENST00000543393 CIAO1O76071 339 aa22.75■■□□□ 1.23
RAP1B-229ENST00000543393 BTDP43251 543 aa22.75■■□□□ 1.23
RAP1B-229ENST00000543393 GCLCP48506 637 aaPredicted RBP22.75■■□□□ 1.23
RAP1B-229ENST00000543393 C11orf49Q9H6J7 331 aa22.75■■□□□ 1.23
RAP1B-229ENST00000543393 MTMR10Q9NXD2 777 aa22.75■■□□□ 1.23
RAP1B-229ENST00000543393 FBXO3Q9UK99 471 aa22.75■■□□□ 1.23
RAP1B-229ENST00000543393 GJD2Q9UKL4 321 aa22.75■■□□□ 1.23
RAP1B-229ENST00000543393 LOC285556D6RIA3 1793 aa22.75■■□□□ 1.23
RAP1B-229ENST00000543393 UNC80Q8N2C7 3258 aa22.74■■□□□ 1.23
RAP1B-229ENST00000543393 FAM196BA6NMK8 535 aa22.74■■□□□ 1.23
RAP1B-229ENST00000543393 SPP2Q13103 211 aa22.74■■□□□ 1.23
RAP1B-229ENST00000543393 FAM163AQ96GL9 167 aaPredicted RBP22.74■■□□□ 1.23
RAP1B-229ENST00000543393 ABCF2Q9UG63 623 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms