RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 RHBDD1Q8TEB9 315 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 AAASQ9NRG9 546 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 DLEC1Q9Y238 1755 aa13.35□□□□□ -0.27
RFC5-209ENST00000543153 CAMTA2O94983 1202 aa13.35□□□□□ -0.27
RFC5-209ENST00000543153 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
RFC5-209ENST00000543153 PHLDB3Q6NSJ2 640 aa13.35□□□□□ -0.27
RFC5-209ENST00000543153 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
RFC5-209ENST00000543153 KLRG1Q96E93 195 aa13.35□□□□□ -0.27
RFC5-209ENST00000543153 IQSEC3Q9UPP2 1182 aaPredicted RBP13.35□□□□□ -0.27
RFC5-209ENST00000543153 TIAM2Q8IVF5 1701 aa13.34□□□□□ -0.27
RFC5-209ENST00000543153 ST8SIA5O15466 376 aa13.34□□□□□ -0.27
RFC5-209ENST00000543153 PPP2R1AP30153 589 aa13.34□□□□□ -0.27
RFC5-209ENST00000543153 FOXD4L5Q5VV16 416 aaPredicted RBP13.34□□□□□ -0.27
RFC5-209ENST00000543153 TAS1R3Q7RTX0 852 aa13.34□□□□□ -0.27
RFC5-209ENST00000543153 DNAJC5GQ8N7S2 189 aa13.34□□□□□ -0.27
RFC5-209ENST00000543153 ZFP42Q96MM3 310 aa13.34□□□□□ -0.27
RFC5-209ENST00000543153 TAOK3Q9H2K8 898 aa13.34□□□□□ -0.27
RFC5-209ENST00000543153 ATP13A2Q9NQ11 1180 aa13.34□□□□□ -0.27
RFC5-209ENST00000543153 SERTM1A2A2V5 107 aa13.33□□□□□ -0.28
RFC5-209ENST00000543153 FAM177BA6PVY3 158 aa13.33□□□□□ -0.28
RFC5-209ENST00000543153 PRELPP51888 382 aa13.33□□□□□ -0.28
RFC5-209ENST00000543153 DCTN1Q14203 1278 aa13.33□□□□□ -0.28
RFC5-209ENST00000543153 TEAD4Q15561 434 aa13.33□□□□□ -0.28
RFC5-209ENST00000543153 SOGA3Q5TF21 947 aa13.33□□□□□ -0.28
RFC5-209ENST00000543153 PRPF40BQ6NWY9 871 aaKnown RBP13.33□□□□□ -0.28
RFC5-209ENST00000543153 LYSMD3Q7Z3D4 306 aa13.33□□□□□ -0.28
RFC5-209ENST00000543153 ZNF232Q9UNY5 417 aa13.33□□□□□ -0.28
RFC5-209ENST00000543153 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
RFC5-209ENST00000543153 SIPA1L3O60292 1781 aaPredicted RBP13.32□□□□□ -0.28
RFC5-209ENST00000543153 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
RFC5-209ENST00000543153 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
RFC5-209ENST00000543153 STYK1Q6J9G0 422 aa13.32□□□□□ -0.28
RFC5-209ENST00000543153 RNF217Q8TC41 542 aa13.32□□□□□ -0.28
RFC5-209ENST00000543153 MASTLQ96GX5 879 aa13.32□□□□□ -0.28
RFC5-209ENST00000543153 COL11A2P13942 1736 aaPredicted RBP13.31□□□□□ -0.28
RFC5-209ENST00000543153 PRICKLE2Q7Z3G6 844 aa13.31□□□□□ -0.28
RFC5-209ENST00000543153 COL26A1Q96A83 441 aa13.31□□□□□ -0.28
RFC5-209ENST00000543153 C2orf49Q9BVC5 232 aaPredicted RBP13.31□□□□□ -0.28
RFC5-209ENST00000543153 NIP7Q9Y221 180 aaKnown RBP eCLIP13.31□□□□□ -0.28
RFC5-209ENST00000543153 USP3Q9Y6I4 520 aa13.31□□□□□ -0.28
RFC5-209ENST00000543153 SBF1O95248 1867 aa13.3□□□□□ -0.28
RFC5-209ENST00000543153 SPATA31C2B4DYI2 1134 aa13.3□□□□□ -0.28
RFC5-209ENST00000543153 SRGNP10124 158 aa13.3□□□□□ -0.28
RFC5-209ENST00000543153 NOS2P35228 1153 aa13.3□□□□□ -0.28
RFC5-209ENST00000543153 CLEC4GQ6UXB4 293 aa13.3□□□□□ -0.28
RFC5-209ENST00000543153 MKNK1Q9BUB5 465 aa13.3□□□□□ -0.28
RFC5-209ENST00000543153 ANKRD31Q8N7Z5 1873 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 FIGNL2A6NMB9 653 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 HTATSF1O43719 755 aaKnown RBP13.29□□□□□ -0.28
RFC5-209ENST00000543153 NPR1P16066 1061 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 TAF7Q15545 349 aaPredicted RBP13.29□□□□□ -0.28
RFC5-209ENST00000543153 CCDC93Q567U6 631 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 WDR44Q5JSH3 913 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 TPTE2Q6XPS3 522 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 Q6ZNB5 142 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 NGEFQ8N5V2 710 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 GNEQ9Y223 722 aaKnown RBP13.29□□□□□ -0.28
RFC5-209ENST00000543153 LTBP3Q9NS15 1303 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 BCORQ6W2J9 1755 aa13.29□□□□□ -0.28
RFC5-209ENST00000543153 POU4F2Q12837 409 aa13.28□□□□□ -0.28
RFC5-209ENST00000543153 MIS18AQ9NYP9 233 aa13.28□□□□□ -0.28
RFC5-209ENST00000543153 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
RFC5-209ENST00000543153 MAN1A2O60476 641 aa13.27□□□□□ -0.29
RFC5-209ENST00000543153 DDNO94850 711 aaPredicted RBP13.27□□□□□ -0.29
RFC5-209ENST00000543153 HIRAP54198 1017 aaPredicted RBP13.27□□□□□ -0.29
RFC5-209ENST00000543153 C4orf17Q53FE4 359 aa13.27□□□□□ -0.29
RFC5-209ENST00000543153 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
RFC5-209ENST00000543153 KIF6Q6ZMV9 814 aa13.27□□□□□ -0.29
RFC5-209ENST00000543153 JMYQ8N9B5 988 aa13.27□□□□□ -0.29
RFC5-209ENST00000543153 IVNS1ABPQ9Y6Y0 642 aa13.27□□□□□ -0.29
RFC5-209ENST00000543153 IQCA1LA6NCM1 817 aa13.26□□□□□ -0.29
RFC5-209ENST00000543153 PLA2G4AP47712 749 aa13.26□□□□□ -0.29
RFC5-209ENST00000543153 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.26□□□□□ -0.29
RFC5-209ENST00000543153 PNISRQ8TF01 805 aaKnown RBP13.26□□□□□ -0.29
RFC5-209ENST00000543153 KIFC2Q96AC6 838 aa13.26□□□□□ -0.29
RFC5-209ENST00000543153 AIDAQ96BJ3 306 aa13.26□□□□□ -0.29
RFC5-209ENST00000543153 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
RFC5-209ENST00000543153 EML1O00423 815 aa13.25□□□□□ -0.29
RFC5-209ENST00000543153 PHKA2P46019 1235 aa13.25□□□□□ -0.29
RFC5-209ENST00000543153 ZNF295-AS1Q8N0V1 137 aa13.25□□□□□ -0.29
RFC5-209ENST00000543153 ZDHHC1Q8WTX9 485 aa13.25□□□□□ -0.29
RFC5-209ENST00000543153 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
RFC5-209ENST00000543153 DACH1Q9UI36 760 aa13.25□□□□□ -0.29
RFC5-209ENST00000543153 MYL6BP14649 208 aa13.24□□□□□ -0.29
RFC5-209ENST00000543153 ALDH1B1P30837 517 aa13.24□□□□□ -0.29
RFC5-209ENST00000543153 FKBP4Q02790 459 aaKnown RBP eCLIP13.24□□□□□ -0.29
RFC5-209ENST00000543153 HLFQ16534 295 aa13.24□□□□□ -0.29
RFC5-209ENST00000543153 EAPPQ56P03 285 aaPredicted RBP13.24□□□□□ -0.29
RFC5-209ENST00000543153 RTKN2Q8IZC4 609 aa13.24□□□□□ -0.29
RFC5-209ENST00000543153 RPGRQ92834 1020 aaKnown RBP13.24□□□□□ -0.29
RFC5-209ENST00000543153 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
RFC5-209ENST00000543153 ZNF277Q9NRM2 450 aaPredicted RBP13.24□□□□□ -0.29
RFC5-209ENST00000543153 HCN4Q9Y3Q4 1203 aa13.24□□□□□ -0.29
RFC5-209ENST00000543153 CACNA1SQ13698 1873 aa13.24□□□□□ -0.29
RFC5-209ENST00000543153 POTECB2RU33 542 aa13.23□□□□□ -0.29
RFC5-209ENST00000543153 GPTP24298 496 aa13.23□□□□□ -0.29
RFC5-209ENST00000543153 SCNN1AP37088 669 aa13.23□□□□□ -0.29
RFC5-209ENST00000543153 COL13A1Q5TAT6 717 aaPredicted RBP13.23□□□□□ -0.29
RFC5-209ENST00000543153 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms