RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PCSK7Q16549 785 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 SHISA2Q6UWI4 295 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 AGMOQ6ZNB7 445 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 C16orf86Q6ZW13 317 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 ILDR2Q71H61 639 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 CCNJLQ8IV13 435 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 FAM169BQ8N8A8 192 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 OR13H1Q8NG92 308 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 STAG1Q8WVM7 1258 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 FERD3LQ96RJ6 166 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 CRBNQ96SW2 442 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 FEZ1Q99689 392 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 LRRC3Q9BY71 257 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 SALL4Q9UJQ4 1053 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 NAGPAQ9UK23 515 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 G3BP2Q9UN86 482 aaKnown RBP5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 ROBO2Q9HCK4 1378 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 ENC1O14682 589 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 TLR3O15455 904 aaKnown RBP5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 SASH3O75995 380 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 NFKB1P19838 968 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 MCM4P33991 863 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 GIPRP48546 466 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 RPS26P62854 115 aaKnown RBP5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 SQSTM1Q13501 440 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 FBXW10Q5XX13 1052 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 NBPF11Q86T75 865 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 TRIM42Q8IWZ5 723 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 DMRTC2Q8IXT2 367 aaPredicted RBP5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 OR6P1Q8NGX9 317 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 TP53INP1Q96A56 240 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 NECAB3Q96P71 396 aaPredicted RBP5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 ZKSCAN3Q9BRR0 538 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 TYW1Q9NV66 732 aaKnown RBP5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 SLC52A1Q9NWF4 448 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 USP21Q9UK80 565 aa5.4□□□□□ -1.54
SFSWAP-211ENST00000542813 PLEKHD1A6NEE1 506 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 MMP20O60882 483 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 F13A1P00488 732 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 PDGFRBP09619 1106 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 LMNB1P20700 586 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 LRP8Q14114 963 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 FXNQ16595 210 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 CWF19L2Q2TBE0 894 aaKnown RBP5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 MTERF2Q49AM1 385 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 C2orf27AQ580R0 203 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 MSL1Q68DK7 614 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 KRT25Q7Z3Z0 450 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 FAM35AQ86V20 835 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 NCAPG2Q86XI2 1143 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 DTWD1Q8N5C7 304 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 FBXO27Q8NI29 283 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 OSMRQ99650 979 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 SSBP4Q9BWG4 385 aaPredicted RBP5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 DZANK1Q9NVP4 752 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 FRRS1LQ9P0K9 344 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 FAN1Q9Y2M0 1017 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 LEMD3Q9Y2U8 911 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 RIPOR2Q9Y4F9 1068 aa5.39□□□□□ -1.55
SFSWAP-211ENST00000542813 KIF4AO95239 1232 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 MAP3K6O95382 1288 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 RARAP10276 462 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 ACPPP15309 386 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 ITPKAP23677 461 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 TARSP26639 723 aaKnown RBP5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 GRIA4P48058 902 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 MASP1P48740 699 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 ZNF165P49910 485 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 SEPT6Q14141 434 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 MPP2Q14168 576 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 LARP1BQ659C4 914 aaKnown RBP5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 BNC2Q6ZN30 1099 aaPredicted RBP5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 CCDC84Q86UT8 332 aaPredicted RBP5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 THAP3Q8WTV1 239 aaPredicted RBP5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 GATAD2BQ8WXI9 593 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 PSMD1Q99460 953 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 MIR1-1HGQ9H1L0 117 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 SEC31BQ9NQW1 1179 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 CECR2Q9BXF3 1484 aa5.38□□□□□ -1.55
SFSWAP-211ENST00000542813 METTL12A8MUP2 240 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 PAGE1O75459 146 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 HCLS1P14317 486 aaPredicted RBP5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 CPB1P15086 417 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 HYAL2Q12891 473 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 TCEA2Q15560 299 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 TKFCQ3LXA3 575 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 FBXO11Q86XK2 927 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 JDP2Q8WYK2 163 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 JARID2Q92833 1246 aaPredicted RBP5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 PLD4Q96BZ4 506 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 LPIN3Q9BQK8 851 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 GPN3Q9UHW5 284 aaPredicted RBP5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 ZNRF3Q9ULT6 936 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 NACADO15069 1562 aa5.37□□□□□ -1.55
SFSWAP-211ENST00000542813 LOC102724159A0A0B4J2E5 919 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 CCDC194A0A1B0GVG4 234 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 FAM221AA4D161 298 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 PSAPP07602 524 aa5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 VIL1P09327 827 aaKnown RBP5.36□□□□□ -1.55
SFSWAP-211ENST00000542813 IMPDH2P12268 514 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms