RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CLEC11AQ9Y240 323 aa27.61■■■□□ 2.01
HOMER3-205ENST00000542541 FLT1P17948 1338 aa27.6■■■□□ 2.01
HOMER3-205ENST00000542541 ALX1Q15699 326 aa27.6■■■□□ 2.01
HOMER3-205ENST00000542541 FAM198AQ9UFP1 575 aa27.6■■■□□ 2.01
HOMER3-205ENST00000542541 TDO2P48775 406 aa27.59■■■□□ 2.01
HOMER3-205ENST00000542541 TCP10Q12799 353 aa27.59■■■□□ 2.01
HOMER3-205ENST00000542541 AMOTL1Q8IY63 956 aa27.59■■■□□ 2.01
HOMER3-205ENST00000542541 ZNF784Q8NCA9 323 aaPredicted RBP27.59■■■□□ 2.01
HOMER3-205ENST00000542541 FAM151AQ8WW52 585 aa27.59■■■□□ 2.01
HOMER3-205ENST00000542541 NAPBQ9H115 298 aa27.59■■■□□ 2.01
HOMER3-205ENST00000542541 DDX4Q9NQI0 724 aaKnown RBP27.59■■■□□ 2.01
HOMER3-205ENST00000542541 MKRN1Q9UHC7 482 aaKnown RBP27.59■■■□□ 2.01
HOMER3-205ENST00000542541 LSG1Q9H089 658 aaKnown RBP27.59■■■□□ 2.01
HOMER3-205ENST00000542541 OSBPL5Q9H0X9 879 aaPredicted RBP27.59■■■□□ 2.01
HOMER3-205ENST00000542541 MCM9Q9NXL9 1143 aa27.59■■■□□ 2.01
HOMER3-205ENST00000542541 CTNNA3Q9UI47 895 aa27.59■■■□□ 2.01
HOMER3-205ENST00000542541 EPB41L2O43491 1005 aaKnown RBP27.58■■■□□ 2.01
HOMER3-205ENST00000542541 LDHDQ86WU2 507 aa27.58■■■□□ 2.01
HOMER3-205ENST00000542541 SULF1Q8IWU6 871 aa27.58■■■□□ 2.01
HOMER3-205ENST00000542541 MAP4K1Q92918 833 aa27.58■■■□□ 2.01
HOMER3-205ENST00000542541 DHX36Q9H2U1 1008 aaKnown RBP27.58■■■□□ 2.01
HOMER3-205ENST00000542541 FOXP2O15409 715 aa27.57■■■□□ 2
HOMER3-205ENST00000542541 PTH1RQ03431 593 aa27.57■■■□□ 2
HOMER3-205ENST00000542541 PPP2R3BQ9Y5P8 575 aa27.57■■■□□ 2
HOMER3-205ENST00000542541 U3KPZ7 1027 aaPredicted RBP27.57■■■□□ 2
HOMER3-205ENST00000542541 ZMYM6O95789 1325 aa27.57■■■□□ 2
HOMER3-205ENST00000542541 FGAP02671 866 aa27.56■■■□□ 2
HOMER3-205ENST00000542541 RASA3Q14644 834 aa27.56■■■□□ 2
HOMER3-205ENST00000542541 DEFB129Q9H1M3 183 aa27.56■■■□□ 2
HOMER3-205ENST00000542541 EPB41L4AQ9HCS5 686 aaPredicted RBP27.56■■■□□ 2
HOMER3-205ENST00000542541 ARPP21Q9UBL0 812 aaPredicted RBP27.56■■■□□ 2
HOMER3-205ENST00000542541 POLR3DP05423 398 aaPredicted RBP27.56■■■□□ 2
HOMER3-205ENST00000542541 ZSCAN29Q8IWY8 852 aaPredicted RBP27.56■■■□□ 2
HOMER3-205ENST00000542541 USP17L12C9JPN9 530 aa27.55■■■□□ 2
HOMER3-205ENST00000542541 USP17L21D6R901 530 aa27.55■■■□□ 2
HOMER3-205ENST00000542541 KRT26Q7Z3Y9 468 aa27.55■■■□□ 2
HOMER3-205ENST00000542541 TTC6Q86TZ1 520 aa27.55■■■□□ 2
HOMER3-205ENST00000542541 CNTNAP1P78357 1384 aa27.55■■■□□ 2
HOMER3-205ENST00000542541 SBK1Q52WX2 424 aa27.54■■■□□ 2
HOMER3-205ENST00000542541 CTR9Q6PD62 1173 aa27.54■■■□□ 2
HOMER3-205ENST00000542541 CDC37L1Q7L3B6 337 aa27.54■■■□□ 2
HOMER3-205ENST00000542541 SAP30BPQ9UHR5 308 aaKnown RBP27.54■■■□□ 2
HOMER3-205ENST00000542541 PALD1Q9ULE6 856 aa27.54■■■□□ 2
HOMER3-205ENST00000542541 ECM29Q5VYK3 1845 aa27.54■■■□□ 2
HOMER3-205ENST00000542541 HLA-DOAP06340 250 aa27.53■■■□□ 2
HOMER3-205ENST00000542541 ZFPM1Q8IX07 1006 aa27.53■■■□□ 2
HOMER3-205ENST00000542541 BACH2Q9BYV9 841 aa27.53■■■□□ 2
HOMER3-205ENST00000542541 POTEIP0CG38 1075 aa27.52■■■□□ 2
HOMER3-205ENST00000542541 POTEJP0CG39 1038 aa27.52■■■□□ 2
HOMER3-205ENST00000542541 TMEM39BQ9GZU3 492 aa27.52■■■□□ 2
HOMER3-205ENST00000542541 RBM8AQ9Y5S9 174 aaKnown RBP27.52■■■□□ 2
HOMER3-205ENST00000542541 COL2A1P02458 1487 aaPredicted RBP27.52■■■□□ 2
HOMER3-205ENST00000542541 IMMTQ16891 758 aaKnown RBP27.52■■■□□ 2
HOMER3-205ENST00000542541 USP26Q9BXU7 913 aa27.52■■■□□ 2
HOMER3-205ENST00000542541 PI4KBQ9UBF8 816 aa27.52■■■□□ 2
HOMER3-205ENST00000542541 SCAF8Q9UPN6 1271 aaKnown RBP27.52■■■□□ 2
HOMER3-205ENST00000542541 ATRNL1Q5VV63 1379 aa27.52■■■□□ 2
HOMER3-205ENST00000542541 MINDY4BA8MYZ0 360 aa27.51■■□□□ 1.99
HOMER3-205ENST00000542541 SEC24BO95487 1268 aa27.51■■□□□ 1.99
HOMER3-205ENST00000542541 C12orf60Q5U649 245 aa27.51■■□□□ 1.99
HOMER3-205ENST00000542541 HOOK2Q96ED9 719 aa27.51■■□□□ 1.99
HOMER3-205ENST00000542541 UPF2Q9HAU5 1272 aaKnown RBP27.51■■□□□ 1.99
HOMER3-205ENST00000542541 DDTLA6NHG4 134 aaPredicted RBP27.5■■□□□ 1.99
HOMER3-205ENST00000542541 ZNF213O14771 459 aa27.5■■□□□ 1.99
HOMER3-205ENST00000542541 CSRNP1Q96S65 589 aa27.5■■□□□ 1.99
HOMER3-205ENST00000542541 KIF3CO14782 793 aa27.49■■□□□ 1.99
HOMER3-205ENST00000542541 SLC3A2P08195 630 aaKnown RBP27.49■■□□□ 1.99
HOMER3-205ENST00000542541 RNF20Q5VTR2 975 aa27.49■■□□□ 1.99
HOMER3-205ENST00000542541 MAP1SQ66K74 1059 aaPredicted RBP27.49■■□□□ 1.99
HOMER3-205ENST00000542541 SH3BP5LQ7L8J4 393 aa27.49■■□□□ 1.99
HOMER3-205ENST00000542541 USP48Q86UV5 1035 aa27.49■■□□□ 1.99
HOMER3-205ENST00000542541 FOXP4Q8IVH2 680 aaPredicted RBP27.49■■□□□ 1.99
HOMER3-205ENST00000542541 TAOK2Q9UL54 1235 aa27.49■■□□□ 1.99
HOMER3-205ENST00000542541 PPARAQ07869 468 aa27.49■■□□□ 1.99
HOMER3-205ENST00000542541 SUPT20HL1Q3ZLR7 823 aa27.49■■□□□ 1.99
HOMER3-205ENST00000542541 CHADLQ6NUI6 762 aa27.49■■□□□ 1.99
HOMER3-205ENST00000542541 FOCADQ5VW36 1801 aa27.48■■□□□ 1.99
HOMER3-205ENST00000542541 MCCP23508 829 aa27.48■■□□□ 1.99
HOMER3-205ENST00000542541 NECTIN1Q15223 517 aa27.48■■□□□ 1.99
HOMER3-205ENST00000542541 TEPSINQ96N21 525 aa27.48■■□□□ 1.99
HOMER3-205ENST00000542541 EHD4Q9H223 541 aa27.48■■□□□ 1.99
HOMER3-205ENST00000542541 CDK5RAP2Q96SN8 1893 aa27.47■■□□□ 1.99
HOMER3-205ENST00000542541 ADM5C9JUS6 153 aa27.47■■□□□ 1.99
HOMER3-205ENST00000542541 PLCD1P51178 756 aa27.47■■□□□ 1.99
HOMER3-205ENST00000542541 SLC4A8Q2Y0W8 1093 aa27.47■■□□□ 1.99
HOMER3-205ENST00000542541 GLIS2Q9BZE0 524 aaPredicted RBP27.47■■□□□ 1.99
HOMER3-205ENST00000542541 SERPINB13Q9UIV8 391 aa27.47■■□□□ 1.99
HOMER3-205ENST00000542541 ANAPC4Q9UJX5 808 aa27.47■■□□□ 1.99
HOMER3-205ENST00000542541 CYP2D7A0A087X1C5 515 aa27.46■■□□□ 1.99
HOMER3-205ENST00000542541 CYP2D6P10635 497 aa27.46■■□□□ 1.99
HOMER3-205ENST00000542541 TRIM34Q9BYJ4 488 aa27.46■■□□□ 1.99
HOMER3-205ENST00000542541 CRACR2BQ8N4Y2 399 aaPredicted RBP27.45■■□□□ 1.99
HOMER3-205ENST00000542541 ZNF287Q9HBT7 754 aa27.45■■□□□ 1.99
HOMER3-205ENST00000542541 HERC5Q9UII4 1024 aaKnown RBP27.45■■□□□ 1.99
HOMER3-205ENST00000542541 ZKSCAN1P17029 563 aaPredicted RBP27.45■■□□□ 1.98
HOMER3-205ENST00000542541 HSPA4P34932 840 aa27.45■■□□□ 1.98
HOMER3-205ENST00000542541 HAND2P61296 217 aa27.45■■□□□ 1.98
HOMER3-205ENST00000542541 CREB3L3Q68CJ9 461 aa27.45■■□□□ 1.98
HOMER3-205ENST00000542541 NAV1Q8NEY1 1877 aa27.45■■□□□ 1.98
HOMER3-205ENST00000542541 NF2P35240 595 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms