RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 PRDX5P30044 214 aa11.15□□□□□ -0.62
UBC-211ENST00000542416 MAP3K10Q02779 954 aa11.15□□□□□ -0.62
UBC-211ENST00000542416 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
UBC-211ENST00000542416 ZSCAN29Q8IWY8 852 aaPredicted RBP11.15□□□□□ -0.62
UBC-211ENST00000542416 USP44Q9H0E7 712 aa11.15□□□□□ -0.62
UBC-211ENST00000542416 UNC93B1Q9H1C4 597 aa11.15□□□□□ -0.62
UBC-211ENST00000542416 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
UBC-211ENST00000542416 PNMA3Q9UL41 463 aa11.15□□□□□ -0.62
UBC-211ENST00000542416 AFG3L2Q9Y4W6 797 aa11.15□□□□□ -0.62
UBC-211ENST00000542416 OTOFQ9HC10 1997 aa11.15□□□□□ -0.62
UBC-211ENST00000542416 RANBP2P49792 3224 aaKnown RBP11.15□□□□□ -0.62
UBC-211ENST00000542416 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.63
UBC-211ENST00000542416 PHF20L1A8MW92 1017 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 CIAO1O76071 339 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 INHAP05111 366 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 ATP2B3Q16720 1220 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 SPTY2D1Q68D10 685 aaPredicted RBP11.14□□□□□ -0.63
UBC-211ENST00000542416 GPR153Q6NV75 609 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 GADL1Q6ZQY3 521 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 NECAB2Q7Z6G3 386 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
UBC-211ENST00000542416 KLHDC4Q8TBB5 520 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 DEFB118Q96PH6 123 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 GABRQQ9UN88 632 aa11.14□□□□□ -0.63
UBC-211ENST00000542416 DLL1O00548 723 aa11.13□□□□□ -0.63
UBC-211ENST00000542416 RFX5P48382 616 aaPredicted RBP11.13□□□□□ -0.63
UBC-211ENST00000542416 RGS3P49796 1198 aa11.13□□□□□ -0.63
UBC-211ENST00000542416 PABPC4Q13310 644 aaKnown RBP eCLIP11.13□□□□□ -0.63
UBC-211ENST00000542416 FAM110CQ1W6H9 321 aa11.13□□□□□ -0.63
UBC-211ENST00000542416 ANKLE1Q8NAG6 615 aa11.13□□□□□ -0.63
UBC-211ENST00000542416 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
UBC-211ENST00000542416 TBC1D2Q9BYX2 928 aa11.13□□□□□ -0.63
UBC-211ENST00000542416 PAK6Q9NQU5 681 aaPredicted RBP11.13□□□□□ -0.63
UBC-211ENST00000542416 AGTPBP1Q9UPW5 1226 aa11.13□□□□□ -0.63
UBC-211ENST00000542416 TBC1D12O60347 775 aa11.12□□□□□ -0.63
UBC-211ENST00000542416 MAP4K4O95819 1239 aaPredicted RBP11.12□□□□□ -0.63
UBC-211ENST00000542416 ELNP15502 786 aa11.12□□□□□ -0.63
UBC-211ENST00000542416 IL15P40933 162 aaPredicted RBP11.12□□□□□ -0.63
UBC-211ENST00000542416 GCLCP48506 637 aaPredicted RBP11.12□□□□□ -0.63
UBC-211ENST00000542416 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
UBC-211ENST00000542416 DZIP1Q86YF9 867 aaKnown RBP11.12□□□□□ -0.63
UBC-211ENST00000542416 PROCA1Q8NCQ7 364 aaPredicted RBP11.12□□□□□ -0.63
UBC-211ENST00000542416 CRISPLD2Q9H0B8 497 aa11.12□□□□□ -0.63
UBC-211ENST00000542416 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
UBC-211ENST00000542416 GAKO14976 1311 aa11.11□□□□□ -0.63
UBC-211ENST00000542416 PDS5AQ29RF7 1337 aaKnown RBP11.11□□□□□ -0.63
UBC-211ENST00000542416 A0A1B0GUL6 1792 aa11.11□□□□□ -0.63
UBC-211ENST00000542416 TRIM75PA6NK02 468 aa11.11□□□□□ -0.63
UBC-211ENST00000542416 NPM3O75607 178 aaKnown RBP11.11□□□□□ -0.63
UBC-211ENST00000542416 HMGCRP04035 888 aa11.11□□□□□ -0.63
UBC-211ENST00000542416 UBTFL1P0CB47 393 aaPredicted RBP11.11□□□□□ -0.63
UBC-211ENST00000542416 BMP8BP34820 402 aa11.11□□□□□ -0.63
UBC-211ENST00000542416 ZFPM1Q8IX07 1006 aa11.11□□□□□ -0.63
UBC-211ENST00000542416 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
UBC-211ENST00000542416 ATRNL1Q5VV63 1379 aa11.11□□□□□ -0.63
UBC-211ENST00000542416 E9PSI1 815 aa11.1□□□□□ -0.63
UBC-211ENST00000542416 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
UBC-211ENST00000542416 CCDC102BQ68D86 513 aa11.1□□□□□ -0.63
UBC-211ENST00000542416 ANKRD13CQ8N6S4 541 aa11.1□□□□□ -0.63
UBC-211ENST00000542416 PAWRQ96IZ0 340 aaKnown RBP11.1□□□□□ -0.63
UBC-211ENST00000542416 NBPF3Q9H094 633 aa11.1□□□□□ -0.63
UBC-211ENST00000542416 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.1□□□□□ -0.632e-7■□□□□ 11.2
UBC-211ENST00000542416 OSBPL5Q9H0X9 879 aaPredicted RBP11.1□□□□□ -0.63
UBC-211ENST00000542416 HMX1Q9NP08 348 aaPredicted RBP11.1□□□□□ -0.63
UBC-211ENST00000542416 ABCF2Q9UG63 623 aa11.1□□□□□ -0.63
UBC-211ENST00000542416 STAP2Q9UGK3 403 aa11.1□□□□□ -0.63
UBC-211ENST00000542416 AKAP2Q9Y2D5 859 aa11.1□□□□□ -0.63
UBC-211ENST00000542416 RPTORQ8N122 1335 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 DDTLA6NHG4 134 aaPredicted RBP11.09□□□□□ -0.63
UBC-211ENST00000542416 LDHCP07864 332 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 BTDP43251 543 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 PHKA1P46020 1223 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 MNX1P50219 401 aaPredicted RBP11.09□□□□□ -0.63
UBC-211ENST00000542416 GSTO1P78417 241 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 FAM9BQ8IZU0 186 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 ZNF280CQ8ND82 737 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 SSH1Q8WYL5 1049 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 GDF15Q99988 308 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 SIL1Q9H173 461 aa11.09□□□□□ -0.63
UBC-211ENST00000542416 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBC-211ENST00000542416 GPR75-ASB3A0A0A6YYF3 556 aa11.08□□□□□ -0.64
UBC-211ENST00000542416 SPP2Q13103 211 aa11.08□□□□□ -0.64
UBC-211ENST00000542416 PICALMQ13492 652 aa11.08□□□□□ -0.64
UBC-211ENST00000542416 MVPQ14764 893 aaKnown RBP11.08□□□□□ -0.64
UBC-211ENST00000542416 ERICH6Q7L0X2 663 aa11.08□□□□□ -0.64
UBC-211ENST00000542416 TRMT44Q8IYL2 757 aaKnown RBP11.08□□□□□ -0.64
UBC-211ENST00000542416 AS3MTQ9HBK9 375 aa11.08□□□□□ -0.64
UBC-211ENST00000542416 COPRSQ9NQ92 184 aa11.08□□□□□ -0.64
UBC-211ENST00000542416 MROH7-TTC4A0A0A0MT08 1334 aa11.08□□□□□ -0.64
UBC-211ENST00000542416 ZNF521Q96K83 1311 aa11.08□□□□□ -0.64
UBC-211ENST00000542416 RFX7Q2KHR2 1363 aa11.07□□□□□ -0.64
UBC-211ENST00000542416 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
UBC-211ENST00000542416 SOX1O00570 391 aaPredicted RBP11.07□□□□□ -0.64
UBC-211ENST00000542416 RASGRF1Q13972 1273 aa11.07□□□□□ -0.64
UBC-211ENST00000542416 LRIT3Q3SXY7 679 aa11.07□□□□□ -0.64
UBC-211ENST00000542416 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
UBC-211ENST00000542416 DDX4Q9NQI0 724 aaKnown RBP11.07□□□□□ -0.64
UBC-211ENST00000542416 HERC5Q9UII4 1024 aaKnown RBP11.07□□□□□ -0.64
UBC-211ENST00000542416 A0A0C4DFX4 3053 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms