RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 PGAP2Q9UHJ9 254 aa17.32■□□□□ 0.36
DDX11-219ENST00000542242 ZMYM6O95789 1325 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 SALL1Q9NSC2 1324 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 MAGEB6P1A0A0J9YX57 407 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 ZNF213O14771 459 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 IGSF3O75054 1194 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 EGFRP00533 1210 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 HAND2P61296 217 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 NFKBIBQ15653 356 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 TMED8Q6PL24 325 aaPredicted RBP17.31■□□□□ 0.36
DDX11-219ENST00000542242 LDHDQ86WU2 507 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 CERS5Q8N5B7 392 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 MIGA1Q8NAN2 632 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 TRPM4Q8TD43 1214 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 TCEANC2Q96MN5 208 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 LARP6Q9BRS8 491 aaKnown RBP17.31■□□□□ 0.36
DDX11-219ENST00000542242 MXD3Q9BW11 206 aa17.31■□□□□ 0.36
DDX11-219ENST00000542242 ADARB2Q9NS39 739 aaKnown RBP17.31■□□□□ 0.36
DDX11-219ENST00000542242 CNOT7Q9UIV1 285 aaKnown RBP17.31■□□□□ 0.36
DDX11-219ENST00000542242 MECOMQ03112 1051 aa17.3■□□□□ 0.36
DDX11-219ENST00000542242 COL9A3Q14050 684 aaPredicted RBP17.3■□□□□ 0.36
DDX11-219ENST00000542242 USP50Q70EL3 339 aaPredicted RBP17.3■□□□□ 0.36
DDX11-219ENST00000542242 DHX32Q7L7V1 743 aaKnown RBP17.3■□□□□ 0.36
DDX11-219ENST00000542242 NSUN4Q96CB9 384 aaKnown RBP17.3■□□□□ 0.36
DDX11-219ENST00000542242 NACAP1Q9BZK3 213 aa17.3■□□□□ 0.36
DDX11-219ENST00000542242 NAPBQ9H115 298 aa17.3■□□□□ 0.36
DDX11-219ENST00000542242 PCDH10Q9P2E7 1040 aa17.3■□□□□ 0.36
DDX11-219ENST00000542242 JAG2Q9Y219 1238 aa17.3■□□□□ 0.36
DDX11-219ENST00000542242 SLC4A4Q9Y6R1 1079 aa17.3■□□□□ 0.36
DDX11-219ENST00000542242 GSG1L2A8MUP6 293 aa17.29■□□□□ 0.36
DDX11-219ENST00000542242 SLC34A2O95436 690 aa17.29■□□□□ 0.36
DDX11-219ENST00000542242 ITGBL1O95965 494 aaPredicted RBP17.29■□□□□ 0.36
DDX11-219ENST00000542242 PRDX5P30044 214 aa17.29■□□□□ 0.36
DDX11-219ENST00000542242 FKBP1AP62942 108 aaKnown RBP17.29■□□□□ 0.36
DDX11-219ENST00000542242 TOB2Q14106 344 aaPredicted RBP17.29■□□□□ 0.36
DDX11-219ENST00000542242 ADGRA1Q86SQ6 560 aa17.29■□□□□ 0.36
DDX11-219ENST00000542242 PNMA8AQ86V59 439 aaPredicted RBP17.29■□□□□ 0.36
DDX11-219ENST00000542242 DZIP1Q86YF9 867 aaKnown RBP17.29■□□□□ 0.36
DDX11-219ENST00000542242 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
DDX11-219ENST00000542242 IFNL3Q8IZI9 196 aa17.29■□□□□ 0.36
DDX11-219ENST00000542242 EPB41L4AQ9HCS5 686 aaPredicted RBP17.29■□□□□ 0.36
DDX11-219ENST00000542242 PASKQ96RG2 1323 aa17.28■□□□□ 0.36
DDX11-219ENST00000542242 PRKAB2O43741 272 aa17.28■□□□□ 0.36
DDX11-219ENST00000542242 LARGE1O95461 756 aa17.28■□□□□ 0.36
DDX11-219ENST00000542242 LDHBP07195 334 aaKnown RBP17.28■□□□□ 0.36
DDX11-219ENST00000542242 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
DDX11-219ENST00000542242 GTF2IP78347 998 aa17.28■□□□□ 0.36
DDX11-219ENST00000542242 NUCB2P80303 420 aa17.28■□□□□ 0.36
DDX11-219ENST00000542242 RAB3GAP1Q15042 981 aa17.28■□□□□ 0.36
DDX11-219ENST00000542242 CHADLQ6NUI6 762 aa17.28■□□□□ 0.36
DDX11-219ENST00000542242 Q6ZUG5 572 aa17.28■□□□□ 0.36
DDX11-219ENST00000542242 ZNF384Q8TF68 577 aa17.28■□□□□ 0.36
DDX11-219ENST00000542242 ZBED3Q96IU2 234 aaPredicted RBP17.28■□□□□ 0.36
DDX11-219ENST00000542242 MYH2Q9UKX2 1941 aa17.27■□□□□ 0.36
DDX11-219ENST00000542242 MYO3BQ8WXR4 1341 aa17.27■□□□□ 0.36
DDX11-219ENST00000542242 G3V3G9 751 aa17.27■□□□□ 0.36
DDX11-219ENST00000542242 TDO2P48775 406 aa17.27■□□□□ 0.36
DDX11-219ENST00000542242 DYNLL1P63167 89 aaKnown RBP17.27■□□□□ 0.36
DDX11-219ENST00000542242 FGD1P98174 961 aa17.27■□□□□ 0.36
DDX11-219ENST00000542242 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.36
DDX11-219ENST00000542242 DCAF8Q5TAQ9 597 aa17.27■□□□□ 0.36
DDX11-219ENST00000542242 SAMD7Q7Z3H4 446 aa17.27■□□□□ 0.36
DDX11-219ENST00000542242 RALYLQ86SE5 291 aaKnown RBP17.27■□□□□ 0.36
DDX11-219ENST00000542242 NCOA7Q8NI08 942 aa17.27■□□□□ 0.36
DDX11-219ENST00000542242 RIOK1Q9BRS2 568 aaKnown RBP17.27■□□□□ 0.36
DDX11-219ENST00000542242 TPCN1Q9ULQ1 816 aa17.27■□□□□ 0.36
DDX11-219ENST00000542242 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.27■□□□□ 0.36
DDX11-219ENST00000542242 BAZ2AQ9UIF9 1905 aaKnown RBP17.26■□□□□ 0.35
DDX11-219ENST00000542242 GSTO1P78417 241 aa17.26■□□□□ 0.35
DDX11-219ENST00000542242 ME3Q16798 604 aa17.26■□□□□ 0.35
DDX11-219ENST00000542242 CCDC83Q8IWF9 413 aa17.26■□□□□ 0.35
DDX11-219ENST00000542242 LDHCP07864 332 aa17.25■□□□□ 0.35
DDX11-219ENST00000542242 TRDNQ13061 729 aa17.25■□□□□ 0.35
DDX11-219ENST00000542242 TBC1D10CQ8IV04 446 aa17.25■□□□□ 0.35
DDX11-219ENST00000542242 MB21D2Q8IYB1 491 aaPredicted RBP17.25■□□□□ 0.35
DDX11-219ENST00000542242 ZC3H15Q8WU90 426 aaKnown RBP17.25■□□□□ 0.35
DDX11-219ENST00000542242 TBC1D22AQ8WUA7 517 aa17.25■□□□□ 0.35
DDX11-219ENST00000542242 LRRC2Q9BYS8 371 aa17.25■□□□□ 0.35
DDX11-219ENST00000542242 NBPF3Q9H094 633 aa17.25■□□□□ 0.35
DDX11-219ENST00000542242 H7C1D1 291 aa17.24■□□□□ 0.35
DDX11-219ENST00000542242 USP17L8P0C7I0 530 aa17.24■□□□□ 0.35
DDX11-219ENST00000542242 MCM5P33992 734 aa17.24■□□□□ 0.35
DDX11-219ENST00000542242 MMP14P50281 582 aa17.24■□□□□ 0.35
DDX11-219ENST00000542242 GRIK5Q16478 980 aa17.24■□□□□ 0.35
DDX11-219ENST00000542242 EAPPQ56P03 285 aaPredicted RBP17.24■□□□□ 0.35
DDX11-219ENST00000542242 TNPO1Q92973 898 aaKnown RBP17.24■□□□□ 0.35
DDX11-219ENST00000542242 BRF1Q92994 677 aa17.24■□□□□ 0.35
DDX11-219ENST00000542242 CRNKL1Q9BZJ0 848 aaKnown RBP17.24■□□□□ 0.35
DDX11-219ENST00000542242 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
DDX11-219ENST00000542242 WDR19Q8NEZ3 1342 aa17.23■□□□□ 0.35
DDX11-219ENST00000542242 PRC1O43663 620 aa17.23■□□□□ 0.35
DDX11-219ENST00000542242 TBC1D10BQ4KMP7 808 aaPredicted RBP17.23■□□□□ 0.35
DDX11-219ENST00000542242 NECAB1Q8N987 351 aa17.23■□□□□ 0.35
DDX11-219ENST00000542242 SDR42E1Q8WUS8 393 aa17.23■□□□□ 0.35
DDX11-219ENST00000542242 NOL10Q9BSC4 688 aaKnown RBP17.23■□□□□ 0.35
DDX11-219ENST00000542242 AGXT2Q9BYV1 514 aa17.23■□□□□ 0.35
DDX11-219ENST00000542242 AATFQ9NY61 560 aaKnown RBP eCLIP17.23■□□□□ 0.35
DDX11-219ENST00000542242 LAMB1P07942 1786 aa17.23■□□□□ 0.35
DDX11-219ENST00000542242 ASTN2O75129 1339 aaPredicted RBP17.22■□□□□ 0.35
DDX11-219ENST00000542242 CTDSPL2Q05D32 466 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms