RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CPLX1O14810 134 aa20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 ATP2B4P23634 1241 aa20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 ZNF445P59923 1031 aa20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 KRT23Q9C075 422 aa20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 CNNM2Q9H8M5 875 aa20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 UBE2HP62256 183 aa20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 KRT85P78386 507 aa20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 L1TD1Q5T7N2 865 aaKnown RBP20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 CMTR1Q8N1G2 835 aaKnown RBP20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 SH3RF3Q8TEJ3 882 aaPredicted RBP20.21■□□□□ 0.83
TMEM50B-210ENST00000542230 C15orf52Q6ZUT6 534 aaKnown RBP20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 SGMS1Q86VZ5 419 aa20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 WDR66Q8TBY9 1149 aa20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 PODXL2Q9NZ53 605 aa20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 ANAPC4Q9UJX5 808 aa20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 TNS1Q9HBL0 1735 aaKnown RBP20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 MYH2Q9UKX2 1941 aa20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 ZBTB43O43298 467 aa20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 RANBP6O60518 1105 aaKnown RBP20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 USP17L8P0C7I0 530 aa20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 PARP3Q9Y6F1 533 aa20.2■□□□□ 0.82
TMEM50B-210ENST00000542230 LEO1Q8WVC0 666 aaPredicted RBP20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 IL1R1P14778 569 aa20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 LIFRP42702 1097 aa20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 MRE11P49959 708 aa20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 NTRK3Q16288 839 aa20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 SP8Q8IXZ3 490 aa20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 CCDC82Q8N4S0 544 aa20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 CRNKL1Q9BZJ0 848 aaKnown RBP20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 ATP6V0A2Q9Y487 856 aa20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 SLC12A7Q9Y666 1083 aa20.19■□□□□ 0.82
TMEM50B-210ENST00000542230 NMT2O60551 498 aa20.18■□□□□ 0.82
TMEM50B-210ENST00000542230 RBSNQ9H1K0 784 aa20.18■□□□□ 0.82
TMEM50B-210ENST00000542230 CCDC88AQ3V6T2 1871 aa20.18■□□□□ 0.82
TMEM50B-210ENST00000542230 GOLGA8AA7E2F4 631 aa20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 SPTY2D1Q68D10 685 aaPredicted RBP20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 SPATA32Q96LK8 384 aa20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 CAMKK2Q96RR4 588 aa20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 MXD3Q9BW11 206 aa20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 CCDC69A6NI79 296 aa20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 DHX16O60231 1041 aaKnown RBP20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 PDIA4P13667 645 aaKnown RBP20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 WTAPQ15007 396 aa20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 FAM47AQ5JRC9 791 aa20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 ZNF622Q969S3 477 aaKnown RBP eCLIP20.17■□□□□ 0.823e-7■□□□□ 8.4
TMEM50B-210ENST00000542230 RNF41Q9H4P4 317 aaPredicted RBP20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 MCM9Q9NXL9 1143 aa20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 ZNF219Q9P2Y4 722 aaPredicted RBP20.17■□□□□ 0.82
TMEM50B-210ENST00000542230 NPR1P16066 1061 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 DOK7Q18PE1 504 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 MFSD14BQ5SR56 506 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 PGBD1Q96JS3 809 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 C8orf76Q96K31 380 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 TNKSO95271 1327 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 COL11A2P13942 1736 aaPredicted RBP20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 KIF28PB7ZC32 967 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 POLR3DP05423 398 aaPredicted RBP20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 LIG1P18858 919 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 SEC23AQ15436 765 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 ENAHQ8N8S7 591 aaPredicted RBP20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 MKRN1Q9UHC7 482 aaKnown RBP20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 NRXN2Q9P2S2 1712 aa20.16■□□□□ 0.82
TMEM50B-210ENST00000542230 LTBP1Q14766 1721 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 CHRNA5P30532 468 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 GUCY1A2P33402 732 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 GTF2IP78347 998 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 FLAD1Q8NFF5 587 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 FBXO18Q8NFZ0 1043 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 ESR2Q92731 530 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 DYNLL2Q96FJ2 89 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 USP28Q96RU2 1077 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 ZSCAN16Q9H4T2 348 aaPredicted RBP20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 SLC15A2Q16348 729 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 TGFBRAP1Q8WUH2 860 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 NUP133Q8WUM0 1156 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 UBAC1Q9BSL1 405 aa20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 RTFDC1Q9BY42 306 aaPredicted RBP20.15■□□□□ 0.82
TMEM50B-210ENST00000542230 GIMAP6Q6P9H5 292 aa20.14■□□□□ 0.82
TMEM50B-210ENST00000542230 LRSAM1Q6UWE0 723 aa20.14■□□□□ 0.82
TMEM50B-210ENST00000542230 FBXW7Q969H0 707 aa20.14■□□□□ 0.82
TMEM50B-210ENST00000542230 KCNQ5Q9NR82 932 aa20.14■□□□□ 0.82
TMEM50B-210ENST00000542230 ATP8A2Q9NTI2 1148 aa20.14■□□□□ 0.82
TMEM50B-210ENST00000542230 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.14■□□□□ 0.82
TMEM50B-210ENST00000542230 KIF3AQ9Y496 699 aa20.14■□□□□ 0.82
TMEM50B-210ENST00000542230 DUOX1Q9NRD9 1551 aa20.14■□□□□ 0.81
TMEM50B-210ENST00000542230 FGRP09769 529 aa20.14■□□□□ 0.81
TMEM50B-210ENST00000542230 DEFB132Q7Z7B7 95 aa20.14■□□□□ 0.81
TMEM50B-210ENST00000542230 MAPKAPK5Q8IW41 473 aa20.14■□□□□ 0.81
TMEM50B-210ENST00000542230 MPNDQ8N594 471 aa20.14■□□□□ 0.81
TMEM50B-210ENST00000542230 SAP30BPQ9UHR5 308 aaKnown RBP20.14■□□□□ 0.81
TMEM50B-210ENST00000542230 F8W031 263 aaPredicted RBP20.13■□□□□ 0.81
TMEM50B-210ENST00000542230 PDE6BP35913 854 aa20.13■□□□□ 0.81
TMEM50B-210ENST00000542230 ZNF654Q8IZM8 581 aa20.13■□□□□ 0.81
TMEM50B-210ENST00000542230 ZSCAN10Q96SZ4 725 aaPredicted RBP20.13■□□□□ 0.81
TMEM50B-210ENST00000542230 ALG1Q9BT22 464 aa20.13■□□□□ 0.81
TMEM50B-210ENST00000542230 SCAND2PQ9GZW5 306 aaPredicted RBP20.13■□□□□ 0.81
TMEM50B-210ENST00000542230 LRRC37AA6NMS7 1700 aa20.13■□□□□ 0.81
TMEM50B-210ENST00000542230 ZBTB22O15209 634 aa20.13■□□□□ 0.81
TMEM50B-210ENST00000542230 USP5P45974 858 aa20.13■□□□□ 0.81
TMEM50B-210ENST00000542230 SART3Q15020 963 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms