RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 TCF20Q9UGU0 1960 aaKnown RBP12.45□□□□□ -0.42
CHFR-220ENST00000541817 CASP7P55210 303 aa12.45□□□□□ -0.42
CHFR-220ENST00000541817 NEXNQ0ZGT2 675 aa12.45□□□□□ -0.42
CHFR-220ENST00000541817 NOL9Q5SY16 702 aaKnown RBP12.45□□□□□ -0.42
CHFR-220ENST00000541817 TREML2Q5T2D2 321 aa12.45□□□□□ -0.42
CHFR-220ENST00000541817 FASTKD5Q7L8L6 764 aaKnown RBP12.45□□□□□ -0.42
CHFR-220ENST00000541817 ALYREFQ86V81 257 aaKnown RBP12.45□□□□□ -0.42
CHFR-220ENST00000541817 FAM84BQ96KN1 310 aaPredicted RBP12.45□□□□□ -0.42
CHFR-220ENST00000541817 UHRF1Q96T88 793 aaPredicted RBP12.45□□□□□ -0.42
CHFR-220ENST00000541817 PTPRFP10586 1907 aa12.45□□□□□ -0.42
CHFR-220ENST00000541817 MAST2Q6P0Q8 1798 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 TRIM75PA6NK02 468 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 PTPRAP18433 802 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 CACNB2Q08289 660 aaPredicted RBP12.44□□□□□ -0.42
CHFR-220ENST00000541817 PDE3AQ14432 1141 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 LHX8Q68G74 356 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 ZFPM1Q8IX07 1006 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 BADQ92934 168 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 ZDHHC15Q96MV8 337 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 ASB2Q96Q27 587 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 PLA2G12BQ9BX93 195 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 AFG3L2Q9Y4W6 797 aa12.44□□□□□ -0.42
CHFR-220ENST00000541817 SMAD3P84022 425 aaKnown RBP12.43□□□□□ -0.42
CHFR-220ENST00000541817 NFIAQ12857 509 aa12.43□□□□□ -0.42
CHFR-220ENST00000541817 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
CHFR-220ENST00000541817 GCKRQ14397 625 aa12.43□□□□□ -0.42
CHFR-220ENST00000541817 CCDC85BQ15834 202 aaPredicted RBP12.43□□□□□ -0.42
CHFR-220ENST00000541817 MAP3K21Q5TCX8 1036 aa12.43□□□□□ -0.42
CHFR-220ENST00000541817 G2E3Q7L622 706 aa12.43□□□□□ -0.42
CHFR-220ENST00000541817 FAM151AQ8WW52 585 aa12.43□□□□□ -0.42
CHFR-220ENST00000541817 PRDM5Q9NQX1 630 aaPredicted RBP12.43□□□□□ -0.42
CHFR-220ENST00000541817 CNNM1Q9NRU3 951 aa12.43□□□□□ -0.42
CHFR-220ENST00000541817 ATP11BQ9Y2G3 1177 aa12.43□□□□□ -0.42
CHFR-220ENST00000541817 SYNGAP1Q96PV0 1343 aa12.42□□□□□ -0.42
CHFR-220ENST00000541817 RTP1P59025 263 aa12.42□□□□□ -0.42
CHFR-220ENST00000541817 HDLBPQ00341 1268 aaKnown RBP12.42□□□□□ -0.42
CHFR-220ENST00000541817 CCL14Q16627 93 aa12.42□□□□□ -0.42
CHFR-220ENST00000541817 FAM110CQ1W6H9 321 aa12.42□□□□□ -0.42
CHFR-220ENST00000541817 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
CHFR-220ENST00000541817 LDHAL6AQ6ZMR3 332 aa12.42□□□□□ -0.42
CHFR-220ENST00000541817 SCYL3Q8IZE3 742 aa12.42□□□□□ -0.42
CHFR-220ENST00000541817 PICK1Q9NRD5 415 aa12.42□□□□□ -0.42
CHFR-220ENST00000541817 PRKAG2Q9UGJ0 569 aa12.42□□□□□ -0.42
CHFR-220ENST00000541817 RPAP1Q9BWH6 1393 aaPredicted RBP12.42□□□□□ -0.42
CHFR-220ENST00000541817 PHIPQ8WWQ0 1821 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 PHF20L1A8MW92 1017 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 FRAT2O75474 233 aaPredicted RBP12.41□□□□□ -0.42
CHFR-220ENST00000541817 FOXO4P98177 505 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 TAF7LQ5H9L4 462 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 FKBP1CQ5VVH2 108 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 SNX27Q96L92 541 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 LRFN3Q9BTN0 628 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 PUS3Q9BZE2 481 aaKnown RBP12.41□□□□□ -0.42
CHFR-220ENST00000541817 THEGQ9P2T0 379 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 AGTPBP1Q9UPW5 1226 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 SLC45A1Q9Y2W3 748 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 FRMPD3Q5JV73 1810 aa12.41□□□□□ -0.42
CHFR-220ENST00000541817 EPHA10Q5JZY3 1008 aa12.4□□□□□ -0.42
CHFR-220ENST00000541817 SH3RF1Q7Z6J0 888 aa12.4□□□□□ -0.42
CHFR-220ENST00000541817 ATXN2LQ8WWM7 1075 aaKnown RBP12.4□□□□□ -0.42
CHFR-220ENST00000541817 EPHX3Q9H6B9 360 aa12.4□□□□□ -0.42
CHFR-220ENST00000541817 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
CHFR-220ENST00000541817 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
CHFR-220ENST00000541817 CDC42EP5Q6NZY7 148 aa12.39□□□□□ -0.43
CHFR-220ENST00000541817 LMBR1LQ6UX01 489 aa12.39□□□□□ -0.43
CHFR-220ENST00000541817 HCN4Q9Y3Q4 1203 aa12.39□□□□□ -0.43
CHFR-220ENST00000541817 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
CHFR-220ENST00000541817 EPHB4P54760 987 aa12.38□□□□□ -0.43
CHFR-220ENST00000541817 MRPS5P82675 430 aaKnown RBP12.38□□□□□ -0.43
CHFR-220ENST00000541817 DDX10Q13206 875 aaKnown RBP12.38□□□□□ -0.43
CHFR-220ENST00000541817 UBE4AQ14139 1066 aa12.38□□□□□ -0.43
CHFR-220ENST00000541817 FBXO33Q7Z6M2 555 aa12.38□□□□□ -0.43
CHFR-220ENST00000541817 VPS37DQ86XT2 251 aa12.38□□□□□ -0.43
CHFR-220ENST00000541817 IL27Q8NEV9 243 aa12.38□□□□□ -0.43
CHFR-220ENST00000541817 RNPC3Q96LT9 517 aaKnown RBP12.38□□□□□ -0.43
CHFR-220ENST00000541817 C1QTNF1Q9BXJ1 281 aa12.38□□□□□ -0.43
CHFR-220ENST00000541817 ZNF576Q9H609 170 aa12.38□□□□□ -0.43
CHFR-220ENST00000541817 ZNF853P0CG23 659 aa12.37□□□□□ -0.43
CHFR-220ENST00000541817 DIXDC1Q155Q3 683 aa12.37□□□□□ -0.43
CHFR-220ENST00000541817 CCDC57Q2TAC2 916 aa12.37□□□□□ -0.43
CHFR-220ENST00000541817 TBC1D22AQ8WUA7 517 aa12.37□□□□□ -0.43
CHFR-220ENST00000541817 NUDT12Q9BQG2 462 aa12.37□□□□□ -0.43
CHFR-220ENST00000541817 USP40Q9NVE5 1235 aa12.37□□□□□ -0.43
CHFR-220ENST00000541817 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
CHFR-220ENST00000541817 DAGLAQ9Y4D2 1042 aa12.37□□□□□ -0.43
CHFR-220ENST00000541817 LRRFIP2Q9Y608 721 aaKnown RBP12.37□□□□□ -0.43
CHFR-220ENST00000541817 DOCK1Q14185 1865 aa12.36□□□□□ -0.43
CHFR-220ENST00000541817 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
CHFR-220ENST00000541817 FAM86C2PA6NEL3 165 aa12.36□□□□□ -0.43
CHFR-220ENST00000541817 DNAJB2P25686 324 aa12.36□□□□□ -0.43
CHFR-220ENST00000541817 CNGA1P29973 690 aa12.36□□□□□ -0.43
CHFR-220ENST00000541817 GJC2Q5T442 439 aaPredicted RBP12.36□□□□□ -0.43
CHFR-220ENST00000541817 HHIPL2Q6UWX4 724 aa12.36□□□□□ -0.43
CHFR-220ENST00000541817 TRIM43Q96BQ3 446 aaPredicted RBP12.36□□□□□ -0.43
CHFR-220ENST00000541817 ASCC2Q9H1I8 757 aaPredicted RBP12.36□□□□□ -0.43
CHFR-220ENST00000541817 PRDM12Q9H4Q4 367 aa12.36□□□□□ -0.43
CHFR-220ENST00000541817 SPINK5Q9NQ38 1064 aaPredicted RBP12.36□□□□□ -0.43
CHFR-220ENST00000541817 DOCK2Q92608 1830 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms