RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 PDIA3P30101 505 aaKnown RBP19.97■□□□□ 0.79
SPIDR-227ENST00000541342 CRY2Q49AN0 593 aa19.97■□□□□ 0.79
SPIDR-227ENST00000541342 ZSCAN16Q9H4T2 348 aaPredicted RBP19.97■□□□□ 0.79
SPIDR-227ENST00000541342 CYP7A1P22680 504 aa19.97■□□□□ 0.79
SPIDR-227ENST00000541342 DRC7Q8IY82 874 aa19.97■□□□□ 0.79
SPIDR-227ENST00000541342 RAI14Q9P0K7 980 aa19.97■□□□□ 0.79
SPIDR-227ENST00000541342 H3BQV1 296 aa19.97■□□□□ 0.79
SPIDR-227ENST00000541342 POLRMTO00411 1230 aaKnown RBP19.97■□□□□ 0.79
SPIDR-227ENST00000541342 HIBADHP31937 336 aaKnown RBP19.97■□□□□ 0.79
SPIDR-227ENST00000541342 EVCP57679 992 aa19.97■□□□□ 0.79
SPIDR-227ENST00000541342 SNW1Q13573 536 aaKnown RBP19.97■□□□□ 0.79
SPIDR-227ENST00000541342 IFFO2Q5TF58 517 aa19.97■□□□□ 0.79
SPIDR-227ENST00000541342 CLIP2Q9UDT6 1046 aa19.97■□□□□ 0.79
SPIDR-227ENST00000541342 CCT2P78371 535 aaKnown RBP19.96■□□□□ 0.79
SPIDR-227ENST00000541342 CBX1P83916 185 aa19.96■□□□□ 0.79
SPIDR-227ENST00000541342 NCOA5Q9HCD5 579 aaKnown RBP19.96■□□□□ 0.79
SPIDR-227ENST00000541342 TACC3Q9Y6A5 838 aa19.96■□□□□ 0.79
SPIDR-227ENST00000541342 RALYLQ86SE5 291 aaKnown RBP19.96■□□□□ 0.79
SPIDR-227ENST00000541342 ZNF274Q96GC6 653 aaPredicted RBP19.96■□□□□ 0.79
SPIDR-227ENST00000541342 INCENPQ9NQS7 918 aa19.96■□□□□ 0.79
SPIDR-227ENST00000541342 TIAM2Q8IVF5 1701 aa19.96■□□□□ 0.79
SPIDR-227ENST00000541342 A0A087WWV3 80 aa19.96■□□□□ 0.79
SPIDR-227ENST00000541342 ST5P78524 1137 aa19.96■□□□□ 0.79
SPIDR-227ENST00000541342 NCBP1Q09161 790 aaKnown RBP19.96■□□□□ 0.79
SPIDR-227ENST00000541342 PDCL2Q8N4E4 241 aa19.96■□□□□ 0.79
SPIDR-227ENST00000541342 SLC4A4Q9Y6R1 1079 aa19.96■□□□□ 0.79
SPIDR-227ENST00000541342 NEDD4P46934 1319 aa19.95■□□□□ 0.79
SPIDR-227ENST00000541342 SEMA3EO15041 775 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 PLSCR1O15162 318 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 APBA3O96018 575 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 CDC25BP30305 580 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 ARID5BQ14865 1188 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 CYB5R4Q7L1T6 521 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 ILDR1Q86SU0 546 aaPredicted RBP19.95■□□□□ 0.78
SPIDR-227ENST00000541342 NAPBQ9H115 298 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 RCOR1Q9UKL0 485 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 CFAP45Q9UL16 551 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 FOSBP53539 338 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 SALL1Q9NSC2 1324 aa19.95■□□□□ 0.78
SPIDR-227ENST00000541342 SARM1Q6SZW1 724 aa19.94■□□□□ 0.78
SPIDR-227ENST00000541342 RPGRQ92834 1020 aaKnown RBP19.94■□□□□ 0.78
SPIDR-227ENST00000541342 AKT1S1Q96B36 256 aa19.94■□□□□ 0.78
SPIDR-227ENST00000541342 LLPHQ9BRT6 129 aaKnown RBP19.94■□□□□ 0.78
SPIDR-227ENST00000541342 ANKIB1Q9P2G1 1089 aa19.94■□□□□ 0.78
SPIDR-227ENST00000541342 PDS5AQ29RF7 1337 aaKnown RBP19.94■□□□□ 0.78
SPIDR-227ENST00000541342 WDR19Q8NEZ3 1342 aa19.94■□□□□ 0.78
SPIDR-227ENST00000541342 CTDSPL2Q05D32 466 aa19.94■□□□□ 0.78
SPIDR-227ENST00000541342 NAA16Q6N069 864 aaPredicted RBP19.94■□□□□ 0.78
SPIDR-227ENST00000541342 NAP1L2Q9ULW6 460 aaPredicted RBP19.94■□□□□ 0.78
SPIDR-227ENST00000541342 GNAT2P19087 354 aa19.94■□□□□ 0.78
SPIDR-227ENST00000541342 USP28Q96RU2 1077 aa19.94■□□□□ 0.78
SPIDR-227ENST00000541342 RIOK1Q9BRS2 568 aaKnown RBP19.94■□□□□ 0.78
SPIDR-227ENST00000541342 PTPDC1A2A3K4 754 aa19.93■□□□□ 0.78
SPIDR-227ENST00000541342 PPFIA3O75145 1194 aa19.93■□□□□ 0.78
SPIDR-227ENST00000541342 ENGASEQ8NFI3 743 aa19.93■□□□□ 0.78
SPIDR-227ENST00000541342 ANKRD31Q8N7Z5 1873 aa19.93■□□□□ 0.78
SPIDR-227ENST00000541342 B4E1Z4 1266 aa19.93■□□□□ 0.78
SPIDR-227ENST00000541342 CCAR1Q8IX12 1150 aaKnown RBP19.93■□□□□ 0.78
SPIDR-227ENST00000541342 TNS1Q9HBL0 1735 aaKnown RBP19.92■□□□□ 0.78
SPIDR-227ENST00000541342 CAVIN2O95810 425 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 DMTNQ08495 405 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 TRDNQ13061 729 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 COL23A1Q86Y22 540 aaPredicted RBP19.92■□□□□ 0.78
SPIDR-227ENST00000541342 MAGEB6P1A0A0J9YX57 407 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 U2AF2P26368 475 aaKnown RBP eCLIP19.92■□□□□ 0.78
SPIDR-227ENST00000541342 DHX40Q8IX18 779 aaKnown RBP19.92■□□□□ 0.78
SPIDR-227ENST00000541342 SDR42E1Q8WUS8 393 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 NSUN4Q96CB9 384 aaKnown RBP19.92■□□□□ 0.78
SPIDR-227ENST00000541342 HPS5Q9UPZ3 1129 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 JAG2Q9Y219 1238 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.92■□□□□ 0.78
SPIDR-227ENST00000541342 SMTNL1A8MU46 457 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 TNNT1P13805 278 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 LRRC8AQ8IWT6 810 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 GPR101Q96P66 508 aaPredicted RBP19.92■□□□□ 0.78
SPIDR-227ENST00000541342 CCDC88AQ3V6T2 1871 aa19.92■□□□□ 0.78
SPIDR-227ENST00000541342 MAST2Q6P0Q8 1798 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 XDHP47989 1333 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 SPDYE4A6NLX3 237 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 USP27XA6NNY8 438 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 RXRBP28702 533 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 DYNLL1P63167 89 aaKnown RBP19.91■□□□□ 0.78
SPIDR-227ENST00000541342 LEMD3Q9Y2U8 911 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 BAZ2AQ9UIF9 1905 aaKnown RBP19.91■□□□□ 0.78
SPIDR-227ENST00000541342 KLF18A0A0U1RQI7 1052 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 TDO2P48775 406 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 GPSM2P81274 684 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 NAA30Q147X3 362 aaPredicted RBP19.91■□□□□ 0.78
SPIDR-227ENST00000541342 PRDX5P30044 214 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 MECOMQ03112 1051 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 MRFAP1L1Q96HT8 127 aa19.91■□□□□ 0.78
SPIDR-227ENST00000541342 NRXN2Q9P2S2 1712 aa19.9■□□□□ 0.78
SPIDR-227ENST00000541342 STX1AQ16623 288 aa19.9■□□□□ 0.78
SPIDR-227ENST00000541342 RBM17Q96I25 401 aaKnown RBP19.9■□□□□ 0.78
SPIDR-227ENST00000541342 NACAP1Q9BZK3 213 aa19.9■□□□□ 0.78
SPIDR-227ENST00000541342 ERCC4Q92889 916 aaPredicted RBP19.9■□□□□ 0.78
SPIDR-227ENST00000541342 SENP2Q9HC62 589 aa19.9■□□□□ 0.78
SPIDR-227ENST00000541342 KLRG2A4D1S0 409 aaPredicted RBP19.89■□□□□ 0.78
SPIDR-227ENST00000541342 RAB11FIP4Q86YS3 637 aa19.89■□□□□ 0.78
SPIDR-227ENST00000541342 SH2B2O14492 632 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms