RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.05□□□□□ -1.28
LMO3-225ENST00000541295 PCSK1NQ9UHG2 260 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 EVLQ9UI08 416 aaPredicted RBP7.05□□□□□ -1.28
LMO3-225ENST00000541295 DDX41Q9UJV9 622 aaKnown RBP7.05□□□□□ -1.28
LMO3-225ENST00000541295 B3GALNT1O75752 331 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 YY1P25490 414 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 HOXD10P28358 340 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 IQCEQ6IPM2 695 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 NAA16Q6N069 864 aaPredicted RBP7.05□□□□□ -1.28
LMO3-225ENST00000541295 KANK3Q6NY19 840 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 PIBF1Q8WXW3 757 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 JAKMIP2Q96AA8 810 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 MMADHCQ9H3L0 296 aaPredicted RBP7.05□□□□□ -1.28
LMO3-225ENST00000541295 ZNF304Q9HCX3 659 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 LMCD1Q9NZU5 365 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 MYO6Q9UM54 1294 aa7.05□□□□□ -1.28
LMO3-225ENST00000541295 FAM25EA8MYX2 175 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 FOXO3O43524 673 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 HOXA10P31260 410 aaPredicted RBP7.04□□□□□ -1.28
LMO3-225ENST00000541295 ELF1P32519 619 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 TBC1D8BQ0IIM8 1120 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 MPP3Q13368 585 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 SYCP1Q15431 976 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.04□□□□□ -1.28
LMO3-225ENST00000541295 SULT6B1Q6IMI4 303 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 LRRC49Q8IUZ0 686 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 TCP11Q8WWU5 503 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 CTNNBL1Q8WYA6 563 aaPredicted RBP7.04□□□□□ -1.28
LMO3-225ENST00000541295 EPSTI1Q96J88 318 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 PHACTR3Q96KR7 559 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 TCHPQ9BT92 498 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 COL3A1P02461 1466 aaPredicted RBP7.04□□□□□ -1.28
LMO3-225ENST00000541295 SOS1Q07889 1333 aaPredicted RBP7.04□□□□□ -1.28
LMO3-225ENST00000541295 ADGRB2O60241 1585 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 TRIM66O15016 1216 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 KDM1AO60341 852 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 GNPTABQ3T906 1256 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 PACS1Q6VY07 963 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 SNX32Q86XE0 403 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 SPATS2Q86XZ4 545 aaKnown RBP7.04□□□□□ -1.28
LMO3-225ENST00000541295 WDR63Q8IWG1 891 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 PLPP6Q8IY26 295 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 DCLK2Q8N568 766 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 ARL6IP6Q8N6S5 226 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 JDP2Q8WYK2 163 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 RTF1Q92541 710 aaKnown RBP7.04□□□□□ -1.28
LMO3-225ENST00000541295 ORAI2Q96SN7 254 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 MTRQ99707 1265 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 TRIM4Q9C037 500 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 SLC45A1Q9Y2W3 748 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 PIK3R4Q99570 1358 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 MON2Q7Z3U7 1717 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 XRN1Q8IZH2 1706 aaKnown RBP7.04□□□□□ -1.28
LMO3-225ENST00000541295 PYGLP06737 847 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 CCNCP24863 283 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 IL13P35225 146 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 GRIK3Q13003 919 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 TAF11Q15544 211 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 CCDC93Q567U6 631 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 MCM10Q7L590 875 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 SRLQ86TD4 932 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 HOOK3Q86VS8 718 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 GOLGA5Q8TBA6 731 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 CCDC114Q96M63 670 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 PLEKHF1Q96S99 279 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 ASAP1Q9ULH1 1129 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 PRELID1Q9Y255 219 aa7.04□□□□□ -1.28
LMO3-225ENST00000541295 IQSEC2Q5JU85 1478 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 TLDC2A0PJX2 215 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 H0Y3Z8 333 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 IVLP07476 585 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 MRPL28Q13084 256 aaKnown RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 BRD3Q15059 726 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 TAF7Q15545 349 aaPredicted RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 EGFLAMQ63HQ2 1017 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 CPLX2Q6PUV4 134 aaKnown RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 CCDC68Q9H2F9 335 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 MAP3K19Q56UN5 1328 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 LRRC7Q96NW7 1537 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 ERC2O15083 957 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 HSPA1AP0DMV8 641 aaKnown RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 HSPA1BP0DMV9 641 aaKnown RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 ZNF16P17020 682 aaPredicted RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 GNAT2P19087 354 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 ENPP1P22413 925 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 TPM4P67936 248 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 EXOSC9Q06265 439 aaKnown RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 DMPKQ09013 629 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 SLC4A8Q2Y0W8 1093 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 PLEKHG6Q3KR16 790 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 LRRC23Q53EV4 343 aaPredicted RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 CEP57L1Q8IYX8 460 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 PHACTR1Q9C0D0 580 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 TNMDQ9H2S6 317 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 VCX3BQ9H321 246 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 QTRT2Q9H974 415 aaKnown RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 TUBA8Q9NY65 449 aaPredicted RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 ZNF142P52746 1687 aaPredicted RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 AKAP12Q02952 1782 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 ELL2O00472 640 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms