RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 ZSCAN31Q96LW9 406 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-204ENST00000540846 SH2B1Q9NRF2 756 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-204ENST00000540846 MKRN1Q9UHC7 482 aaKnown RBP14.79□□□□□ -0.04
SMAD3-204ENST00000540846 WDR90Q96KV7 1748 aa14.79□□□□□ -0.04
SMAD3-204ENST00000540846 ZMYM6O95789 1325 aa14.79□□□□□ -0.04
SMAD3-204ENST00000540846 SIPA1L1O43166 1804 aa14.78□□□□□ -0.04
SMAD3-204ENST00000540846 COL9A3Q14050 684 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-204ENST00000540846 ANKRD1Q15327 319 aa14.78□□□□□ -0.04
SMAD3-204ENST00000540846 GBP4Q96PP9 640 aa14.78□□□□□ -0.04
SMAD3-204ENST00000540846 GJA3Q9Y6H8 435 aa14.78□□□□□ -0.04
SMAD3-204ENST00000540846 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.04
SMAD3-204ENST00000540846 DDX11L8A8MPP1 907 aa14.77□□□□□ -0.04
SMAD3-204ENST00000540846 DDNO94850 711 aaPredicted RBP14.77□□□□□ -0.04
SMAD3-204ENST00000540846 EGFRP00533 1210 aa14.77□□□□□ -0.04
SMAD3-204ENST00000540846 SPDYE6P0CI01 402 aa14.77□□□□□ -0.04
SMAD3-204ENST00000540846 CFAP100Q494V2 611 aa14.77□□□□□ -0.04
SMAD3-204ENST00000540846 SDR42E1Q8WUS8 393 aa14.77□□□□□ -0.04
SMAD3-204ENST00000540846 NEK1Q96PY6 1258 aa14.77□□□□□ -0.04
SMAD3-204ENST00000540846 CTNNA3Q9UI47 895 aa14.77□□□□□ -0.04
SMAD3-204ENST00000540846 SCN4AP35499 1836 aa14.77□□□□□ -0.04
SMAD3-204ENST00000540846 PATL2C9JE40 543 aaKnown RBP14.77□□□□□ -0.05
SMAD3-204ENST00000540846 WDHD1O75717 1129 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-204ENST00000540846 LARGE1O95461 756 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 BAG3O95817 575 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 HMGB1P09429 215 aaKnown RBP14.77□□□□□ -0.05
SMAD3-204ENST00000540846 GNAT2P19087 354 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 MMP14P50281 582 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 ALX1Q15699 326 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 CDC42EP5Q6NZY7 148 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 STOX1Q6ZVD7 989 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 CERS3Q8IU89 383 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 MICALL2Q8IY33 904 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 PRMT6Q96LA8 375 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-204ENST00000540846 GPRC5DQ9NZD1 345 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 SLC4A4Q9Y6R1 1079 aa14.77□□□□□ -0.05
SMAD3-204ENST00000540846 FGAP02671 866 aa14.76□□□□□ -0.05
SMAD3-204ENST00000540846 PKP1Q13835 747 aa14.76□□□□□ -0.05
SMAD3-204ENST00000540846 TOB2Q14106 344 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-204ENST00000540846 IFNL3Q8IZI9 196 aa14.76□□□□□ -0.05
SMAD3-204ENST00000540846 OGFOD1Q8N543 542 aa14.76□□□□□ -0.05
SMAD3-204ENST00000540846 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-204ENST00000540846 CRNKL1Q9BZJ0 848 aaKnown RBP14.76□□□□□ -0.05
SMAD3-204ENST00000540846 MYOZ2Q9NPC6 264 aa14.76□□□□□ -0.05
SMAD3-204ENST00000540846 CNOT7Q9UIV1 285 aaKnown RBP14.76□□□□□ -0.05
SMAD3-204ENST00000540846 HDAC9Q9UKV0 1011 aa14.76□□□□□ -0.05
SMAD3-204ENST00000540846 PLCG2P16885 1265 aa14.75□□□□□ -0.05
SMAD3-204ENST00000540846 NBPF3Q9H094 633 aa14.75□□□□□ -0.05
SMAD3-204ENST00000540846 DCP1AQ9NPI6 582 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-204ENST00000540846 DDX4Q9NQI0 724 aaKnown RBP14.75□□□□□ -0.05
SMAD3-204ENST00000540846 TPCN1Q9ULQ1 816 aa14.75□□□□□ -0.05
SMAD3-204ENST00000540846 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-204ENST00000540846 WNT10BO00744 389 aa14.74□□□□□ -0.05
SMAD3-204ENST00000540846 ST3GAL1Q11201 340 aa14.74□□□□□ -0.05
SMAD3-204ENST00000540846 GIMAP6Q6P9H5 292 aa14.74□□□□□ -0.05
SMAD3-204ENST00000540846 TEX11Q8IYF3 940 aa14.74□□□□□ -0.05
SMAD3-204ENST00000540846 LARP6Q9BRS8 491 aaKnown RBP14.74□□□□□ -0.05
SMAD3-204ENST00000540846 NOL10Q9BSC4 688 aaKnown RBP14.74□□□□□ -0.05
SMAD3-204ENST00000540846 ATP8A2Q9NTI2 1148 aa14.74□□□□□ -0.05
SMAD3-204ENST00000540846 ZDHHC9Q9Y397 364 aa14.74□□□□□ -0.05
SMAD3-204ENST00000540846 FLT1P17948 1338 aa14.74□□□□□ -0.05
SMAD3-204ENST00000540846 GLTPD2A6NH11 291 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 E7EWF7 191 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 BRD1O95696 1058 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 EPS15P42566 896 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 RBM5P52756 815 aaKnown RBP eCLIP14.73□□□□□ -0.05
SMAD3-204ENST00000540846 NFIAQ12857 509 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 DLGAP5Q15398 846 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 ME3Q16798 604 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 IMMTQ16891 758 aaKnown RBP14.73□□□□□ -0.05
SMAD3-204ENST00000540846 NBPF9Q3BBW0 867 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 SAMD7Q7Z3H4 446 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 TCEANC2Q96MN5 208 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 IDI2Q9BXS1 227 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 TDRD3Q9H7E2 651 aaKnown RBP14.73□□□□□ -0.05
SMAD3-204ENST00000540846 USP40Q9NVE5 1235 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 COL2A1P02458 1487 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-204ENST00000540846 SMIM22K7EJ46 135 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 BAG4O95429 457 aaKnown RBP14.73□□□□□ -0.05
SMAD3-204ENST00000540846 PTMSP20962 102 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 CACNB3P54284 484 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 EVX2Q03828 476 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 DHX32Q7L7V1 743 aaKnown RBP14.73□□□□□ -0.05
SMAD3-204ENST00000540846 TRPM4Q8TD43 1214 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 TGFBRAP1Q8WUH2 860 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 AGXT2Q9BYV1 514 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 FAM198AQ9UFP1 575 aa14.73□□□□□ -0.05
SMAD3-204ENST00000540846 POLR2AP24928 1970 aaKnown RBP14.72□□□□□ -0.05
SMAD3-204ENST00000540846 CNTNAP1P78357 1384 aa14.72□□□□□ -0.05
SMAD3-204ENST00000540846 POTECB2RU33 542 aa14.72□□□□□ -0.05
SMAD3-204ENST00000540846 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
SMAD3-204ENST00000540846 EXOSC10Q01780 885 aaKnown RBP14.72□□□□□ -0.05
SMAD3-204ENST00000540846 TBC1D10BQ4KMP7 808 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-204ENST00000540846 CTR9Q6PD62 1173 aa14.72□□□□□ -0.05
SMAD3-204ENST00000540846 MAPKAPK5Q8IW41 473 aa14.72□□□□□ -0.05
SMAD3-204ENST00000540846 CCDC83Q8IWF9 413 aa14.72□□□□□ -0.05
SMAD3-204ENST00000540846 NAPBQ9H115 298 aa14.72□□□□□ -0.05
SMAD3-204ENST00000540846 ZNF70Q9UC06 446 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-204ENST00000540846 TACC3Q9Y6A5 838 aa14.72□□□□□ -0.05
SMAD3-204ENST00000540846 ASTN2O75129 1339 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms