RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 CLEC10AQ8IUN9 316 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 TRIM42Q8IWZ5 723 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 WNT8BQ93098 351 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 NUDT16Q96DE0 195 aaKnown RBP7.19□□□□□ -1.26
PRKDC-209ENST00000540819 KLHDC7BQ96G42 594 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 CSRNP1Q96S65 589 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 ADAM19Q9H013 955 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 GOLGA2P5Q9HBQ8 144 aa7.19□□□□□ -1.26
PRKDC-209ENST00000540819 DDX3YO15523 660 aaKnown RBP7.18□□□□□ -1.26
PRKDC-209ENST00000540819 MED26O95402 600 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 CENPBP07199 599 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-209ENST00000540819 EPHA1P21709 976 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 ARL4DP49703 201 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 RHBDL3P58872 404 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 CHMP4BP1P59074 171 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 BIRC2Q13490 618 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 LCE3BQ5TA77 95 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 FAM46AQ96IP4 442 aaKnown RBP7.18□□□□□ -1.26
PRKDC-209ENST00000540819 MYRFLQ96LU7 910 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 KRTAP4-12Q9BQ66 201 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 KCNF1Q9H3M0 494 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 C7orf69Q9H7B7 122 aa7.18□□□□□ -1.26
PRKDC-209ENST00000540819 HMX2A2RU54 273 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 H3BRJ5 948 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 CES1P23141 567 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 PIP4K2BP78356 416 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 ODR4Q5SWX8 454 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 ANKRD34AQ69YU3 496 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 TSHZ1Q6ZSZ6 1077 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 ZDHHC13Q8IUH4 622 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 APPBP2Q92624 585 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 RELTQ969Z4 430 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 C8orf48Q96LL4 319 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 FAM83CQ9BQN1 747 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 DBNDD2Q9BQY9 259 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 TRIM55Q9BYV6 548 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 ZNF408Q9H9D4 720 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 OSGEPQ9NPF4 335 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 SNTG2Q9NY99 539 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 TMEM63CQ9P1W3 806 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 KANSL3Q9P2N6 904 aa7.17□□□□□ -1.26
PRKDC-209ENST00000540819 GIPC1O14908 333 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 BMP3P12645 472 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 GP2P55259 537 aaKnown RBP7.16□□□□□ -1.26
PRKDC-209ENST00000540819 FAM20CQ8IXL6 584 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 SLC7A3Q8WY07 619 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 PMEPA1Q969W9 287 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 DEPDC7Q96QD5 511 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 RPS6KC1Q96S38 1066 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 CEP89Q96ST8 783 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 RNF208Q9H0X6 261 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 FANCLQ9NW38 375 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 TERF2IPQ9NYB0 399 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 CNTN3Q9P232 1028 aa7.16□□□□□ -1.26
PRKDC-209ENST00000540819 KIAA1324LA8MWY0 1029 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-209ENST00000540819 MAFGO15525 162 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 PPFIA4O75335 1185 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 NEFLP07196 543 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 ST13P50502 369 aaKnown RBP7.15□□□□□ -1.26
PRKDC-209ENST00000540819 SETQ01105 290 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-209ENST00000540819 RAB33AQ14088 237 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 RASA3Q14644 834 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 TAF1CQ15572 869 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-209ENST00000540819 C8orf34Q49A92 452 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 C4orf46Q504U0 113 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 CCSAPQ6IQ19 270 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-209ENST00000540819 FDX2Q6P4F2 183 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 ADAMTSL4Q6UY14 1074 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 BEND4Q6ZU67 534 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 ANKS3Q6ZW76 656 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 ERMP1Q7Z2K6 904 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 FERMT3Q86UX7 667 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 SH3TC2Q8TF17 1288 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 UBASH3BQ8TF42 649 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 RUSC1Q9BVN2 902 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 DNAJC25Q9H1X3 360 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 C12orf49Q9H741 205 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 SALL4Q9UJQ4 1053 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 STRIP2Q9ULQ0 834 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 POLIQ9UNA4 740 aa7.15□□□□□ -1.26
PRKDC-209ENST00000540819 PDE2AO00408 941 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-209ENST00000540819 TM4SF5O14894 197 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 KLF4O43474 513 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 ADAM11O75078 769 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 WNT11O96014 354 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 TAL1P17542 331 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-209ENST00000540819 NLRP12P59046 1061 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 DNM1Q05193 864 aaKnown RBP7.14□□□□□ -1.27
PRKDC-209ENST00000540819 XKR5Q6UX68 686 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 KIAA0907Q7Z7F0 614 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-209ENST00000540819 ATCAYQ86WG3 371 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 HOMER1Q86YM7 354 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 GIMAP7Q8NHV1 300 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 EDEM1Q92611 657 aa7.14□□□□□ -1.27
PRKDC-209ENST00000540819 TTF2Q9UNY4 1162 aaKnown RBP7.14□□□□□ -1.27
PRKDC-209ENST00000540819 OAS3Q9Y6K5 1087 aaKnown RBP7.14□□□□□ -1.27
PRKDC-209ENST00000540819 BTBD11A6QL63 1104 aa7.13□□□□□ -1.27
PRKDC-209ENST00000540819 EIF1AYO14602 144 aaKnown RBP7.13□□□□□ -1.27
PRKDC-209ENST00000540819 GAS2O43903 313 aaKnown RBP7.13□□□□□ -1.27
PRKDC-209ENST00000540819 GYS2P54840 703 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms