RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 STRBPQ96SI9 672 aaKnown RBP18.64■□□□□ 0.57
DDB1-218ENST00000540784 HELLSQ9NRZ9 838 aa18.64■□□□□ 0.57
DDB1-218ENST00000540784 DOCK2Q92608 1830 aa18.64■□□□□ 0.57
DDB1-218ENST00000540784 PPP1R12BO60237 982 aaPredicted RBP18.63■□□□□ 0.57
DDB1-218ENST00000540784 PRKG1Q13976 671 aa18.63■□□□□ 0.57
DDB1-218ENST00000540784 CDAN1Q8IWY9 1227 aa18.63■□□□□ 0.57
DDB1-218ENST00000540784 SEC62Q99442 399 aaKnown RBP18.63■□□□□ 0.57
DDB1-218ENST00000540784 OSBPL5Q9H0X9 879 aaPredicted RBP18.63■□□□□ 0.57
DDB1-218ENST00000540784 GBA2Q9HCG7 927 aaPredicted RBP18.63■□□□□ 0.57
DDB1-218ENST00000540784 SLC4A4Q9Y6R1 1079 aa18.63■□□□□ 0.57
DDB1-218ENST00000540784 MAST2Q6P0Q8 1798 aa18.63■□□□□ 0.57
DDB1-218ENST00000540784 M0R2C6 588 aa18.62■□□□□ 0.57
DDB1-218ENST00000540784 FKBP1BP68106 108 aa18.62■□□□□ 0.57
DDB1-218ENST00000540784 MCMDC2Q4G0Z9 681 aa18.62■□□□□ 0.57
DDB1-218ENST00000540784 SH3BP5LQ7L8J4 393 aa18.62■□□□□ 0.57
DDB1-218ENST00000540784 ARMC9Q7Z3E5 817 aa18.62■□□□□ 0.57
DDB1-218ENST00000540784 DHX36Q9H2U1 1008 aaKnown RBP18.62■□□□□ 0.57
DDB1-218ENST00000540784 CREBZFQ9NS37 354 aa18.62■□□□□ 0.57
DDB1-218ENST00000540784 DIAPH3Q9NSV4 1193 aa18.62■□□□□ 0.57
DDB1-218ENST00000540784 ABT1Q9ULW3 272 aaKnown RBP18.62■□□□□ 0.57
DDB1-218ENST00000540784 ECM29Q5VYK3 1845 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 RFX7Q2KHR2 1363 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 FLT1P17948 1338 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 DDTLA6NHG4 134 aaPredicted RBP18.61■□□□□ 0.57
DDB1-218ENST00000540784 GPAA1O43292 621 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 PRKAB2O43741 272 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 GNAT2P19087 354 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 NMIQ13287 307 aaPredicted RBP18.61■□□□□ 0.57
DDB1-218ENST00000540784 SDR42E1Q8WUS8 393 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 DDRGK1Q96HY6 314 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 FAM227BQ96M60 508 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 CSRNP1Q96S65 589 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 ATP8A2Q9NTI2 1148 aa18.61■□□□□ 0.57
DDB1-218ENST00000540784 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
DDB1-218ENST00000540784 PATL2C9JE40 543 aaKnown RBP18.6■□□□□ 0.57
DDB1-218ENST00000540784 UBE2Q2LH0YL09 131 aa18.6■□□□□ 0.57
DDB1-218ENST00000540784 USP2O75604 605 aaPredicted RBP18.6■□□□□ 0.57
DDB1-218ENST00000540784 DCAF15Q66K64 600 aa18.6■□□□□ 0.57
DDB1-218ENST00000540784 MIGA2Q7L4E1 593 aa18.6■□□□□ 0.57
DDB1-218ENST00000540784 PI4KBQ9UBF8 816 aa18.6■□□□□ 0.57
DDB1-218ENST00000540784 PALD1Q9ULE6 856 aa18.6■□□□□ 0.57
DDB1-218ENST00000540784 ANGEL1Q9UNK9 670 aaKnown RBP18.6■□□□□ 0.57
DDB1-218ENST00000540784 APPP05067 770 aa18.59■□□□□ 0.57
DDB1-218ENST00000540784 POLR3DP05423 398 aaPredicted RBP18.59■□□□□ 0.57
DDB1-218ENST00000540784 BMP2KLQ5H9B9 411 aa18.59■□□□□ 0.57
DDB1-218ENST00000540784 CWC27Q6UX04 472 aaKnown RBP18.59■□□□□ 0.57
DDB1-218ENST00000540784 MOB2Q70IA6 237 aa18.59■□□□□ 0.57
DDB1-218ENST00000540784 TTC6Q86TZ1 520 aa18.59■□□□□ 0.57
DDB1-218ENST00000540784 FOXP4Q8IVH2 680 aaPredicted RBP18.59■□□□□ 0.57
DDB1-218ENST00000540784 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
DDB1-218ENST00000540784 MCM9Q9NXL9 1143 aa18.59■□□□□ 0.57
DDB1-218ENST00000540784 TLL2Q9Y6L7 1015 aa18.59■□□□□ 0.57
DDB1-218ENST00000540784 RPAP1Q9BWH6 1393 aaPredicted RBP18.58■□□□□ 0.57
DDB1-218ENST00000540784 A0A0D9SFI3 127 aa18.58■□□□□ 0.56
DDB1-218ENST00000540784 IREB2P48200 963 aaKnown RBP18.58■□□□□ 0.56
DDB1-218ENST00000540784 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.56
DDB1-218ENST00000540784 HUNKP57058 714 aa18.58■□□□□ 0.56
DDB1-218ENST00000540784 SAPCD2Q86UD0 394 aa18.58■□□□□ 0.56
DDB1-218ENST00000540784 ZNF341Q9BYN7 854 aa18.58■□□□□ 0.56
DDB1-218ENST00000540784 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.56
DDB1-218ENST00000540784 FZD1Q9UP38 647 aa18.58■□□□□ 0.56
DDB1-218ENST00000540784 ATRNL1Q5VV63 1379 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 GSG1L2A8MUP6 293 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 HLA-DOAP06340 250 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 CHMLP26374 656 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 HTRA3P83110 453 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 DEFB115Q30KQ5 88 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 CCDC129Q6ZRS4 1044 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 RUFY2Q8WXA3 655 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
DDB1-218ENST00000540784 TBC1D12O60347 775 aa18.56■□□□□ 0.56
DDB1-218ENST00000540784 MAP3K9P80192 1104 aa18.56■□□□□ 0.56
DDB1-218ENST00000540784 MAP3K10Q02779 954 aa18.56■□□□□ 0.56
DDB1-218ENST00000540784 MAP3K11Q16584 847 aa18.56■□□□□ 0.56
DDB1-218ENST00000540784 LDLRAD1Q5T700 205 aa18.56■□□□□ 0.56
DDB1-218ENST00000540784 AMOTL1Q8IY63 956 aa18.56■□□□□ 0.56
DDB1-218ENST00000540784 CRACR2BQ8N4Y2 399 aaPredicted RBP18.56■□□□□ 0.56
DDB1-218ENST00000540784 TRIM34Q9BYJ4 488 aa18.56■□□□□ 0.56
DDB1-218ENST00000540784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.56■□□□□ 0.56
DDB1-218ENST00000540784 GTF3C3Q9Y5Q9 886 aa18.56■□□□□ 0.56
DDB1-218ENST00000540784 COL2A1P02458 1487 aaPredicted RBP18.55■□□□□ 0.56
DDB1-218ENST00000540784 UNCXA6NJT0 531 aa18.55■□□□□ 0.56
DDB1-218ENST00000540784 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
DDB1-218ENST00000540784 USP17L21D6R901 530 aa18.55■□□□□ 0.56
DDB1-218ENST00000540784 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
DDB1-218ENST00000540784 IFNL3Q8IZI9 196 aa18.55■□□□□ 0.56
DDB1-218ENST00000540784 KLRG1Q96E93 195 aa18.55■□□□□ 0.56
DDB1-218ENST00000540784 HHIPL1Q96JK4 782 aa18.55■□□□□ 0.56
DDB1-218ENST00000540784 HERC5Q9UII4 1024 aaKnown RBP18.55■□□□□ 0.56
DDB1-218ENST00000540784 MYH7P12883 1935 aa18.55■□□□□ 0.56
DDB1-218ENST00000540784 TDO2P48775 406 aa18.54■□□□□ 0.56
DDB1-218ENST00000540784 PLCD1P51178 756 aa18.54■□□□□ 0.56
DDB1-218ENST00000540784 ANKRD13AQ8IZ07 590 aa18.54■□□□□ 0.56
DDB1-218ENST00000540784 SLC10A4Q96EP9 437 aa18.54■□□□□ 0.56
DDB1-218ENST00000540784 WRNIP1Q96S55 665 aa18.54■□□□□ 0.56
DDB1-218ENST00000540784 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.54■□□□□ 0.56
DDB1-218ENST00000540784 ZNF112Q9UJU3 913 aa18.54■□□□□ 0.56
DDB1-218ENST00000540784 SSC5DA1L4H1 1573 aa18.54■□□□□ 0.56
DDB1-218ENST00000540784 TRPM7Q96QT4 1865 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms