RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 USP49Q70CQ1 688 aa18.29■□□□□ 0.52
CACFD1-206ENST00000540581 MAP3K14Q99558 947 aa18.29■□□□□ 0.52
CACFD1-206ENST00000540581 INTS13Q9NVM9 706 aa18.29■□□□□ 0.52
CACFD1-206ENST00000540581 ZSWIM5Q9P217 1185 aa18.29■□□□□ 0.52
CACFD1-206ENST00000540581 MAGEB6Q8N7X4 407 aa18.29■□□□□ 0.52
CACFD1-206ENST00000540581 WDR24Q96S15 920 aa18.29■□□□□ 0.52
CACFD1-206ENST00000540581 CDKL5O76039 1030 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 MBD4O95243 580 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 SSRP1Q08945 709 aaKnown RBP18.28■□□□□ 0.52
CACFD1-206ENST00000540581 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 TOGARAM2Q6ZUX3 1019 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 MIGA1Q8NAN2 632 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 IRX2Q9BZI1 471 aaPredicted RBP18.28■□□□□ 0.52
CACFD1-206ENST00000540581 NAPBQ9H115 298 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 TUBE1Q9UJT0 475 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 HPSEQ9Y251 543 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 NFE2L3Q9Y4A8 694 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 PCDH11XQ9BZA7 1347 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 PCDH11YQ9BZA8 1340 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 NWD2Q9ULI1 1742 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 IKBKBO14920 756 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 CCDC93Q567U6 631 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 VSTM4Q8IW00 320 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 CCDC34Q96HJ3 373 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 SAMSN1Q9NSI8 373 aaKnown RBP18.28■□□□□ 0.52
CACFD1-206ENST00000540581 FAM217BQ9NTX9 383 aaPredicted RBP18.28■□□□□ 0.52
CACFD1-206ENST00000540581 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
CACFD1-206ENST00000540581 CBFA2T2O43439 604 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 MTF1Q14872 753 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 RESP18Q5W5W9 173 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 REXO1L1PQ8IX06 675 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 DIS3L2Q8IYB7 885 aaKnown RBP18.28■□□□□ 0.52
CACFD1-206ENST00000540581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
CACFD1-206ENST00000540581 LY9Q9HBG7 655 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 TMOD3Q9NYL9 352 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 TBC1D2BQ9UPU7 963 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 PPP2R2CQ9Y2T4 447 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 TACC3Q9Y6A5 838 aa18.28■□□□□ 0.52
CACFD1-206ENST00000540581 CPDO75976 1380 aa18.27■□□□□ 0.52
CACFD1-206ENST00000540581 AFMP43652 599 aa18.27■□□□□ 0.52
CACFD1-206ENST00000540581 IGDCC4Q8TDY8 1250 aa18.27■□□□□ 0.52
CACFD1-206ENST00000540581 NOL10Q9BSC4 688 aaKnown RBP18.27■□□□□ 0.52
CACFD1-206ENST00000540581 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
CACFD1-206ENST00000540581 RIPOR2Q9Y4F9 1068 aa18.27■□□□□ 0.52
CACFD1-206ENST00000540581 ANKRD18BA2A2Z9 1011 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 SMIM22K7EJ46 135 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 H2AFXP16104 143 aaPredicted RBP18.27■□□□□ 0.51
CACFD1-206ENST00000540581 BMS1Q14692 1282 aaKnown RBP18.27■□□□□ 0.51
CACFD1-206ENST00000540581 TMCO3Q6UWJ1 677 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 TTLL11Q8NHH1 800 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 OXER1Q8TDS5 423 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 STAMQ92783 540 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 BAG1Q99933 345 aaPredicted RBP18.27■□□□□ 0.51
CACFD1-206ENST00000540581 MAN1B1Q9UKM7 699 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 PCDHB6Q9Y5E3 794 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 FHOD1Q9Y613 1164 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 TMEM94Q12767 1356 aa18.27■□□□□ 0.51
CACFD1-206ENST00000540581 PNMA6AP0CW24 399 aaPredicted RBP18.26■□□□□ 0.51
CACFD1-206ENST00000540581 EVA1CP58658 441 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 FBXL16Q8N461 479 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 KRI1Q8N9T8 703 aaKnown RBP18.26■□□□□ 0.51
CACFD1-206ENST00000540581 ZBTB38Q8NAP3 1195 aaPredicted RBP18.26■□□□□ 0.51
CACFD1-206ENST00000540581 ZCCHC17Q9NP64 241 aaKnown RBP18.26■□□□□ 0.51
CACFD1-206ENST00000540581 SEC31BQ9NQW1 1179 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 ADAMTS7Q9UKP4 1686 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 A0A0U1RQJ8 604 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 VWA3AA6NCI4 1184 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 FAM205CA6NFA0 338 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 IRS4O14654 1257 aaPredicted RBP18.26■□□□□ 0.51
CACFD1-206ENST00000540581 PPP6R2O75170 966 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 NTRK3Q16288 839 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 ATRIPQ8WXE1 791 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 EPB41L4AQ9HCS5 686 aaPredicted RBP18.26■□□□□ 0.51
CACFD1-206ENST00000540581 LZTFL1Q9NQ48 299 aa18.26■□□□□ 0.51
CACFD1-206ENST00000540581 PCCAP05165 728 aaPredicted RBP18.25■□□□□ 0.51
CACFD1-206ENST00000540581 CASQ1P31415 396 aa18.25■□□□□ 0.51
CACFD1-206ENST00000540581 TDO2P48775 406 aa18.25■□□□□ 0.51
CACFD1-206ENST00000540581 TOB1P50616 345 aaPredicted RBP18.25■□□□□ 0.51
CACFD1-206ENST00000540581 POSTNQ15063 836 aa18.25■□□□□ 0.51
CACFD1-206ENST00000540581 SMYD4Q8IYR2 804 aaPredicted RBP18.25■□□□□ 0.51
CACFD1-206ENST00000540581 CUTAO60888 179 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 SAFBQ15424 915 aaKnown RBP eCLIP18.24■□□□□ 0.51
CACFD1-206ENST00000540581 NOSTRINQ8IVI9 506 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 IFNL3Q8IZI9 196 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 DHX58Q96C10 678 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 TIGD1Q96MW7 591 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 STRBPQ96SI9 672 aaKnown RBP18.24■□□□□ 0.51
CACFD1-206ENST00000540581 CABP5Q9NP86 173 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 PARP3Q9Y6F1 533 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 TRPM3Q9HCF6 1732 aaPredicted RBP18.24■□□□□ 0.51
CACFD1-206ENST00000540581 KCND1Q9NSA2 647 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 CAMTA1Q9Y6Y1 1673 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 MINDY4BA8MYZ0 360 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 IL2RBP14784 551 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 PLA2G4AP47712 749 aa18.24■□□□□ 0.51
CACFD1-206ENST00000540581 ERVV-2B6SEH9 535 aa18.23■□□□□ 0.51
CACFD1-206ENST00000540581 PRDM1O75626 825 aa18.23■□□□□ 0.51
CACFD1-206ENST00000540581 SMARCE1Q969G3 411 aa18.23■□□□□ 0.51
CACFD1-206ENST00000540581 GYS2P54840 703 aa18.23■□□□□ 0.51
CACFD1-206ENST00000540581 CTSWP56202 376 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms