RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 NSUN4Q96CB9 384 aaKnown RBP16.16■□□□□ 0.18
SEMA4D-223ENST00000540475 KCNH4Q9UQ05 1017 aa16.16■□□□□ 0.18
SEMA4D-223ENST00000540475 RBBP6Q7Z6E9 1792 aaKnown RBP16.15■□□□□ 0.18
SEMA4D-223ENST00000540475 FOCADQ5VW36 1801 aa16.15■□□□□ 0.18
SEMA4D-223ENST00000540475 CAP1Q01518 475 aa16.15■□□□□ 0.18
SEMA4D-223ENST00000540475 SNAPC2Q13487 334 aa16.15■□□□□ 0.18
SEMA4D-223ENST00000540475 TNNI3KQ59H18 835 aa16.15■□□□□ 0.18
SEMA4D-223ENST00000540475 ZFYVE28Q9HCC9 887 aa16.15■□□□□ 0.18
SEMA4D-223ENST00000540475 FPGT-TNNI3KV9GXZ4 949 aa16.15■□□□□ 0.18
SEMA4D-223ENST00000540475 MAST2Q6P0Q8 1798 aa16.15■□□□□ 0.18
SEMA4D-223ENST00000540475 COL2A1P02458 1487 aaPredicted RBP16.15■□□□□ 0.18
SEMA4D-223ENST00000540475 DOCK1Q14185 1865 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 BTBD19C9JJ37 291 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 TBC1D12O60347 775 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 SURF6O75683 361 aaKnown RBP16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 LDHCP07864 332 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 BTDP43251 543 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 GSTO1P78417 241 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 MOGSQ13724 837 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 GORABQ5T7V8 394 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 PI16Q6UXB8 463 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 ITPRIPQ8IWB1 547 aa16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 DDX4Q9NQI0 724 aaKnown RBP16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 MKI67P46013 3256 aaKnown RBP16.14■□□□□ 0.17
SEMA4D-223ENST00000540475 DDTLA6NHG4 134 aaPredicted RBP16.13■□□□□ 0.17
SEMA4D-223ENST00000540475 TLR2O60603 784 aa16.13■□□□□ 0.17
SEMA4D-223ENST00000540475 TAF1CQ15572 869 aaPredicted RBP16.13■□□□□ 0.17
SEMA4D-223ENST00000540475 CEP85Q6P2H3 762 aa16.13■□□□□ 0.17
SEMA4D-223ENST00000540475 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
SEMA4D-223ENST00000540475 CD99L2Q8TCZ2 262 aa16.13■□□□□ 0.17
SEMA4D-223ENST00000540475 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
SEMA4D-223ENST00000540475 PTPN22Q9Y2R2 807 aa16.13■□□□□ 0.17
SEMA4D-223ENST00000540475 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
SEMA4D-223ENST00000540475 CXCL11O14625 94 aa16.12■□□□□ 0.17
SEMA4D-223ENST00000540475 CCDC158Q5M9N0 1113 aa16.12■□□□□ 0.17
SEMA4D-223ENST00000540475 ANKRD23Q86SG2 305 aa16.12■□□□□ 0.17
SEMA4D-223ENST00000540475 DBNDD2Q9BQY9 259 aa16.12■□□□□ 0.17
SEMA4D-223ENST00000540475 ATAD5Q96QE3 1844 aa16.11■□□□□ 0.17
SEMA4D-223ENST00000540475 MS4A1P11836 297 aa16.11■□□□□ 0.17
SEMA4D-223ENST00000540475 SOX10P56693 466 aa16.11■□□□□ 0.17
SEMA4D-223ENST00000540475 PPP4CP60510 307 aa16.11■□□□□ 0.17
SEMA4D-223ENST00000540475 SCYL3Q8IZE3 742 aa16.11■□□□□ 0.17
SEMA4D-223ENST00000540475 EFCC1Q9HA90 598 aa16.11■□□□□ 0.17
SEMA4D-223ENST00000540475 SIPA1L1O43166 1804 aa16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 CYP2E1P05181 493 aaPredicted RBP16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 C17orf99Q6UX52 265 aa16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 PANK1Q8TE04 598 aa16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 ARMC5Q96C12 935 aa16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 EAF2Q96CJ1 260 aaPredicted RBP16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 DBNLQ9UJU6 430 aaKnown RBP16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 ADGRA2Q96PE1 1338 aa16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 PDE4DIPQ5VU43 2346 aa16.1■□□□□ 0.17
SEMA4D-223ENST00000540475 PTPRAP18433 802 aa16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 OS9Q13438 667 aaPredicted RBP16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 ARHGEF6Q15052 776 aa16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 GPAT2Q6NUI2 795 aa16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 RAI14Q9P0K7 980 aa16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 LRP2BPQ9P2M1 347 aa16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 AFG3L2Q9Y4W6 797 aa16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 ZSWIM8A7E2V4 1837 aa16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 MGAMO43451 1857 aa16.09■□□□□ 0.17
SEMA4D-223ENST00000540475 A0A0G2JLL6 359 aaPredicted RBP16.08■□□□□ 0.16
SEMA4D-223ENST00000540475 GNRH1P01148 92 aa16.08■□□□□ 0.16
SEMA4D-223ENST00000540475 PICALMQ13492 652 aa16.08■□□□□ 0.16
SEMA4D-223ENST00000540475 PRRT2Q7Z6L0 340 aaPredicted RBP16.08■□□□□ 0.16
SEMA4D-223ENST00000540475 ZSCAN29Q8IWY8 852 aaPredicted RBP16.08■□□□□ 0.16
SEMA4D-223ENST00000540475 OSBPL5Q9H0X9 879 aaPredicted RBP16.08■□□□□ 0.16
SEMA4D-223ENST00000540475 PDHXO00330 501 aa16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 SLURP2P0DP57 97 aa16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 LACTBP83111 547 aaPredicted RBP16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 TMED8Q6PL24 325 aaPredicted RBP16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 METTL16Q86W50 562 aaKnown RBP16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 ERC1Q8IUD2 1116 aa16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 SNRKQ9NRH2 765 aa16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 ZBTB40Q9NUA8 1239 aa16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 SLC45A1Q9Y2W3 748 aa16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 ZHX2Q9Y6X8 837 aa16.07■□□□□ 0.16
SEMA4D-223ENST00000540475 BAG3O95817 575 aa16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 ZAP70P43403 619 aa16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 NAA16Q6N069 864 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 FASTKD5Q7L8L6 764 aaKnown RBP16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 RPAP2Q8IXW5 612 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 SH3RF3Q8TEJ3 882 aaPredicted RBP16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 PICK1Q9NRD5 415 aa16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 TLR7Q9NYK1 1049 aaKnown RBP16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 KIAA0100Q14667 2235 aaKnown RBP16.06■□□□□ 0.16
SEMA4D-223ENST00000540475 LOC285556D6RIA3 1793 aa16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 PLCG2P16885 1265 aa16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 PRMT2P55345 433 aa16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 HSP90AB4PQ58FF6 505 aa16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 TEX11Q8IYF3 940 aa16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 CCDC8Q9H0W5 538 aaPredicted RBP16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 DHX36Q9H2U1 1008 aaKnown RBP16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 PIH1D3Q9NQM4 214 aaKnown RBP16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 HERC5Q9UII4 1024 aaKnown RBP16.05■□□□□ 0.16
SEMA4D-223ENST00000540475 DDX19BQ9UMR2 479 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms