RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 VAMP4O75379 141 aa10.11□□□□□ -0.79
LRP6-204ENST00000540415 PTPRAP18433 802 aa10.11□□□□□ -0.79
LRP6-204ENST00000540415 METTL24Q5JXM2 366 aa10.11□□□□□ -0.79
LRP6-204ENST00000540415 WWC1Q8IX03 1113 aa10.11□□□□□ -0.79
LRP6-204ENST00000540415 MRIQ9BWK5 157 aa10.11□□□□□ -0.79
LRP6-204ENST00000540415 AFG3L2Q9Y4W6 797 aa10.11□□□□□ -0.79
LRP6-204ENST00000540415 PFASO15067 1338 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 MROH5Q6ZUA9 1318 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 FANCIQ9NVI1 1328 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 TRIM75PA6NK02 468 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
LRP6-204ENST00000540415 CAVIN4Q5BKX8 364 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 TREML2Q5T2D2 321 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 SH3BP5LQ7L8J4 393 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 SCYL3Q8IZE3 742 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 SMCR8Q8TEV9 937 aaPredicted RBP10.1□□□□□ -0.79
LRP6-204ENST00000540415 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 C11orf49Q9H6J7 331 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 C9orf78Q9NZ63 289 aaPredicted RBP10.1□□□□□ -0.79
LRP6-204ENST00000540415 CDH23Q9H251 3354 aa10.1□□□□□ -0.79
LRP6-204ENST00000540415 RPTORQ8N122 1335 aa10.09□□□□□ -0.79
LRP6-204ENST00000540415 MUC3AQ02505 3323 aa10.09□□□□□ -0.79
LRP6-204ENST00000540415 PEX10O60683 326 aa10.09□□□□□ -0.79
LRP6-204ENST00000540415 PDE8BO95263 885 aa10.09□□□□□ -0.79
LRP6-204ENST00000540415 NBPF7P0C2Y1 421 aaPredicted RBP10.09□□□□□ -0.79
LRP6-204ENST00000540415 PRDX5P30044 214 aa10.09□□□□□ -0.79
LRP6-204ENST00000540415 EXOSC9Q06265 439 aaKnown RBP10.09□□□□□ -0.79
LRP6-204ENST00000540415 FASTKD5Q7L8L6 764 aaKnown RBP10.09□□□□□ -0.79
LRP6-204ENST00000540415 ANKRD44Q8N8A2 993 aa10.09□□□□□ -0.79
LRP6-204ENST00000540415 COA7Q96BR5 231 aa10.09□□□□□ -0.79
LRP6-204ENST00000540415 BICC1Q9H694 974 aaKnown RBP10.09□□□□□ -0.79
LRP6-204ENST00000540415 PRKRIP1Q9H875 184 aaPredicted RBP10.09□□□□□ -0.79
LRP6-204ENST00000540415 USP40Q9NVE5 1235 aa10.09□□□□□ -0.79
LRP6-204ENST00000540415 MAST3O60307 1309 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 POTEB2H3BUK9 544 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 HMGCRP04035 888 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 FGFR2P21802 821 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 RGS3P49796 1198 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 LRRC26Q2I0M4 334 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 CCDC184Q52MB2 194 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 SLC4A10Q6U841 1118 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 ANKLE1Q8NAG6 615 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 TRIB2Q92519 343 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 PICK1Q9NRD5 415 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 GJD2Q9UKL4 321 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 OGDHLQ9ULD0 1010 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 SUGT1Q9Y2Z0 365 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 DNAH12Q6ZR08 3092 aa10.08□□□□□ -0.8
LRP6-204ENST00000540415 MGAMO43451 1857 aa10.07□□□□□ -0.8
LRP6-204ENST00000540415 DDTLA6NHG4 134 aaPredicted RBP10.07□□□□□ -0.8
LRP6-204ENST00000540415 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
LRP6-204ENST00000540415 FAM110CQ1W6H9 321 aa10.07□□□□□ -0.8
LRP6-204ENST00000540415 HMX1Q9NP08 348 aaPredicted RBP10.07□□□□□ -0.8
LRP6-204ENST00000540415 DDX4Q9NQI0 724 aaKnown RBP10.07□□□□□ -0.8
LRP6-204ENST00000540415 AGTPBP1Q9UPW5 1226 aa10.07□□□□□ -0.8
LRP6-204ENST00000540415 SLC45A1Q9Y2W3 748 aa10.07□□□□□ -0.8
LRP6-204ENST00000540415 ALDH1L1O75891 902 aa10.06□□□□□ -0.8
LRP6-204ENST00000540415 CAPN2P17655 700 aa10.06□□□□□ -0.8
LRP6-204ENST00000540415 CYP2B6P20813 491 aa10.06□□□□□ -0.8
LRP6-204ENST00000540415 CCDC27Q2M243 656 aa10.06□□□□□ -0.8
LRP6-204ENST00000540415 RABL6Q3YEC7 729 aaPredicted RBP10.06□□□□□ -0.8
LRP6-204ENST00000540415 SRCIN1Q9C0H9 1055 aa10.06□□□□□ -0.8
LRP6-204ENST00000540415 PRDM6Q9NQX0 595 aa10.06□□□□□ -0.8
LRP6-204ENST00000540415 SALL2Q9Y467 1007 aaPredicted RBP10.06□□□□□ -0.8
LRP6-204ENST00000540415 DDX60LQ5H9U9 1706 aaKnown RBP10.06□□□□□ -0.8
LRP6-204ENST00000540415 TTC28Q96AY4 2481 aa10.06□□□□□ -0.8
LRP6-204ENST00000540415 RFX7Q2KHR2 1363 aa10.05□□□□□ -0.8
LRP6-204ENST00000540415 IFIT1P09914 478 aaKnown RBP10.05□□□□□ -0.8
LRP6-204ENST00000540415 COL6A1P12109 1028 aa10.05□□□□□ -0.8
LRP6-204ENST00000540415 PRKAR2AP13861 404 aaKnown RBP10.05□□□□□ -0.8
LRP6-204ENST00000540415 ZEB1P37275 1124 aaPredicted RBP10.05□□□□□ -0.8
LRP6-204ENST00000540415 MAP3K10Q02779 954 aa10.05□□□□□ -0.8
LRP6-204ENST00000540415 RRP1BQ14684 758 aaKnown RBP10.05□□□□□ -0.8
LRP6-204ENST00000540415 PUM3Q15397 648 aaKnown RBP10.05□□□□□ -0.8
LRP6-204ENST00000540415 MAP3K21Q5TCX8 1036 aa10.05□□□□□ -0.8
LRP6-204ENST00000540415 ZSCAN29Q8IWY8 852 aaPredicted RBP10.05□□□□□ -0.8
LRP6-204ENST00000540415 WDR66Q8TBY9 1149 aa10.05□□□□□ -0.8
LRP6-204ENST00000540415 RAPGEFL1Q9UHV5 662 aa10.05□□□□□ -0.8
LRP6-204ENST00000540415 LRRFIP2Q9Y608 721 aaKnown RBP10.05□□□□□ -0.8
LRP6-204ENST00000540415 IL16Q14005 1332 aa10.05□□□□□ -0.8
LRP6-204ENST00000540415 COL2A1P02458 1487 aaPredicted RBP10.04□□□□□ -0.8
LRP6-204ENST00000540415 CTNND1O60716 968 aaKnown RBP10.04□□□□□ -0.8
LRP6-204ENST00000540415 LDHBP07195 334 aaKnown RBP10.04□□□□□ -0.8
LRP6-204ENST00000540415 CCND3P30281 292 aaPredicted RBP10.04□□□□□ -0.8
LRP6-204ENST00000540415 HMGCS2P54868 508 aa10.04□□□□□ -0.8
LRP6-204ENST00000540415 SPP2Q13103 211 aa10.04□□□□□ -0.8
LRP6-204ENST00000540415 PICALMQ13492 652 aa10.04□□□□□ -0.8
LRP6-204ENST00000540415 FAM109BQ6ICB4 259 aaPredicted RBP10.04□□□□□ -0.8
LRP6-204ENST00000540415 CDX2Q99626 313 aaPredicted RBP10.04□□□□□ -0.8
LRP6-204ENST00000540415 IDI2Q9BXS1 227 aa10.04□□□□□ -0.8
LRP6-204ENST00000540415 ASCC2Q9H1I8 757 aaPredicted RBP10.04□□□□□ -0.8
LRP6-204ENST00000540415 UTYO14607 1347 aa10.04□□□□□ -0.8
LRP6-204ENST00000540415 KIF16BQ96L93 1317 aa10.04□□□□□ -0.8
LRP6-204ENST00000540415 ENTPD3O75355 529 aa10.03□□□□□ -0.8
LRP6-204ENST00000540415 RFX5P48382 616 aaPredicted RBP10.03□□□□□ -0.8
LRP6-204ENST00000540415 CACNB2Q08289 660 aaPredicted RBP10.03□□□□□ -0.8
LRP6-204ENST00000540415 CCL14Q16627 93 aa10.03□□□□□ -0.8
LRP6-204ENST00000540415 LHX8Q68G74 356 aa10.03□□□□□ -0.8
LRP6-204ENST00000540415 MAFAQ8NHW3 353 aaPredicted RBP10.03□□□□□ -0.8
LRP6-204ENST00000540415 TXNRD2Q9NNW7 524 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms