RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 AOC3Q16853 763 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 KSR2Q6VAB6 950 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 FBXO18Q8NFZ0 1043 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 RBM46Q8TBY0 533 aaKnown RBP9.98□□□□□ -0.81
DDB1-217ENST00000540166 FSD1Q9BTV5 496 aa9.98□□□□□ -0.81
DDB1-217ENST00000540166 ZCCHC17Q9NP64 241 aaKnown RBP9.98□□□□□ -0.81
DDB1-217ENST00000540166 AP5Z1O43299 807 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 SEC31AO94979 1220 aaKnown RBP9.97□□□□□ -0.81
DDB1-217ENST00000540166 MAP2K2P36507 400 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 MUM1L1Q5H9M0 696 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 CT47A1Q5JQC4 288 aaPredicted RBP9.97□□□□□ -0.81
DDB1-217ENST00000540166 FAM173BQ6P4H8 233 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 CRAMP1Q96RY5 1269 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 SERPINC1P01008 464 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 ACTN2P35609 894 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 FSTL1Q12841 308 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 DHX37Q8IY37 1157 aaKnown RBP9.97□□□□□ -0.81
DDB1-217ENST00000540166 TDRD7Q8NHU6 1098 aaKnown RBP9.97□□□□□ -0.81
DDB1-217ENST00000540166 ZSWIM4Q9H7M6 989 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 USP27XA6NNY8 438 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 ME1P48163 572 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 GNG11P61952 73 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 GRAPQ13588 217 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 SART3Q15020 963 aaKnown RBP9.97□□□□□ -0.81
DDB1-217ENST00000540166 BLOC1S2Q6QNY1 142 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 LDHAL6AQ6ZMR3 332 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 NLRP10Q86W26 655 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 C2orf69Q8N8R5 385 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 GRAPLQ8TC17 118 aaPredicted RBP9.97□□□□□ -0.81
DDB1-217ENST00000540166 TCEANC2Q96MN5 208 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 DBNDD1Q9H9R9 158 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 SNX14Q9Y5W7 946 aa9.97□□□□□ -0.81
DDB1-217ENST00000540166 HSPA4P34932 840 aa9.96□□□□□ -0.81
DDB1-217ENST00000540166 AACSQ86V21 672 aa9.96□□□□□ -0.81
DDB1-217ENST00000540166 ANKRD2Q9GZV1 360 aa9.96□□□□□ -0.81
DDB1-217ENST00000540166 CLSTN2Q9H4D0 955 aa9.96□□□□□ -0.81
DDB1-217ENST00000540166 GNL3LQ9NVN8 582 aaKnown RBP9.96□□□□□ -0.81
DDB1-217ENST00000540166 ZNRF3Q9ULT6 936 aa9.96□□□□□ -0.81
DDB1-217ENST00000540166 ATP8B1O43520 1251 aa9.96□□□□□ -0.82
DDB1-217ENST00000540166 ARID5BQ14865 1188 aa9.96□□□□□ -0.82
DDB1-217ENST00000540166 CAVIN4Q5BKX8 364 aa9.96□□□□□ -0.82
DDB1-217ENST00000540166 SRLQ86TD4 932 aa9.96□□□□□ -0.82
DDB1-217ENST00000540166 AOPEPQ8N6M6 819 aa9.96□□□□□ -0.82
DDB1-217ENST00000540166 COL18A1P39060 1754 aa9.96□□□□□ -0.82
DDB1-217ENST00000540166 MAP1SQ66K74 1059 aaPredicted RBP9.96□□□□□ -0.82
DDB1-217ENST00000540166 EXOC4Q96A65 974 aa9.96□□□□□ -0.82
DDB1-217ENST00000540166 MRFAP1L1Q96HT8 127 aa9.96□□□□□ -0.82
DDB1-217ENST00000540166 SIL1Q9H173 461 aa9.96□□□□□ -0.82
DDB1-217ENST00000540166 PHAXQ9H814 394 aaKnown RBP9.96□□□□□ -0.82
DDB1-217ENST00000540166 DOT1LQ8TEK3 1739 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 F8W031 263 aaPredicted RBP9.95□□□□□ -0.82
DDB1-217ENST00000540166 PHACTR2O75167 634 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 MAGEA9P43362 315 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 CCDC144BQ3MJ40 725 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 CCDC144CPQ8IYA2 1237 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 SGSM2O43147 1006 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 MYCNP04198 464 aaPredicted RBP9.95□□□□□ -0.82
DDB1-217ENST00000540166 GUCY2CP25092 1073 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 PROSER3Q2NL68 480 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 VEZTQ9HBM0 779 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 ANKRD1Q15327 319 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 METTL24Q5JXM2 366 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 LDHDQ86WU2 507 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 GBP3Q9H0R5 595 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 MTMR6Q9Y217 621 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 COL3A1P02461 1466 aaPredicted RBP9.95□□□□□ -0.82
DDB1-217ENST00000540166 NHSQ6T4R5 1651 aa9.95□□□□□ -0.82
DDB1-217ENST00000540166 ETF1P62495 437 aaKnown RBP9.94□□□□□ -0.82
DDB1-217ENST00000540166 LRRFIP1Q32MZ4 808 aaKnown RBP9.94□□□□□ -0.82
DDB1-217ENST00000540166 CFAP100Q494V2 611 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 PLA2G4DQ86XP0 818 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 SP8Q8IXZ3 490 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 ADAM21Q9UKJ8 722 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 ZC3H4Q9UPT8 1303 aaKnown RBP9.94□□□□□ -0.82
DDB1-217ENST00000540166 KIAA0754O94854 1291 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 ATP2B4P23634 1241 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 CDC25BP30305 580 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 ZNF804AQ7Z570 1209 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 RASEFQ8IZ41 740 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 GOLGA1Q92805 767 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 METTL22Q9BUU2 404 aaPredicted RBP9.94□□□□□ -0.82
DDB1-217ENST00000540166 EFCAB8A8MWE9 144 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 PRKG1Q13976 671 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 DEFB115Q30KQ5 88 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 CCDC158Q5M9N0 1113 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 NBPF11Q86T75 865 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 DDX11Q96FC9 970 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 USP44Q9H0E7 712 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 CCDC8Q9H0W5 538 aaPredicted RBP9.94□□□□□ -0.82
DDB1-217ENST00000540166 BOLA2Q9H3K6 86 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 ECHDC1Q9NTX5 307 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 ATP6V0A2Q9Y487 856 aa9.94□□□□□ -0.82
DDB1-217ENST00000540166 PLA2G4AP47712 749 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 TBC1D10BQ4KMP7 808 aaPredicted RBP9.93□□□□□ -0.82
DDB1-217ENST00000540166 TNS4Q8IZW8 715 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 ZBTB38Q8NAP3 1195 aaPredicted RBP9.93□□□□□ -0.82
DDB1-217ENST00000540166 ORC3Q9UBD5 711 aaPredicted RBP9.93□□□□□ -0.82
DDB1-217ENST00000540166 FHOD1Q9Y613 1164 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 CBFA2T2O43439 604 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms