RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MFSD6Q6ZSS7 791 aa15.77■□□□□ 0.11
BNIP3-202ENST00000540159 FOXP4Q8IVH2 680 aaPredicted RBP15.77■□□□□ 0.11
BNIP3-202ENST00000540159 SOS2Q07890 1332 aaPredicted RBP15.77■□□□□ 0.11
BNIP3-202ENST00000540159 A0A1W2PQ27 194 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 A0A1W2PQ64 194 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 A0A1W2PQD8 194 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 EXOC5O00471 708 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 MAP3K12Q12852 859 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 MTERF4Q7Z6M4 381 aaKnown RBP15.76■□□□□ 0.11
BNIP3-202ENST00000540159 ADGRA1Q86SQ6 560 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 DIS3L2Q8IYB7 885 aaKnown RBP15.76■□□□□ 0.11
BNIP3-202ENST00000540159 CCAR2Q8N163 923 aaKnown RBP15.76■□□□□ 0.11
BNIP3-202ENST00000540159 TCRBV5S4A2TA0A5A2 114 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 ATP6V1AP38606 617 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 PDE4BQ07343 736 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 SSRP1Q08945 709 aaKnown RBP15.76■□□□□ 0.11
BNIP3-202ENST00000540159 TTF1Q15361 905 aaPredicted RBP15.76■□□□□ 0.11
BNIP3-202ENST00000540159 ELF2Q15723 593 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 LPIN2Q92539 896 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 STAMQ92783 540 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 FANCLQ9NW38 375 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 RAI14Q9P0K7 980 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 PCDHA5Q9Y5H7 936 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 GSG1L2A8MUP6 293 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 CAVIN2O95810 425 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 CMA1P23946 247 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 NLRP12P59046 1061 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 NCAPHQ15003 741 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 E4F1Q66K89 784 aaPredicted RBP15.76■□□□□ 0.11
BNIP3-202ENST00000540159 CREBRFQ8IUR6 639 aa15.76■□□□□ 0.11
BNIP3-202ENST00000540159 NIP7Q9Y221 180 aaKnown RBP eCLIP15.76■□□□□ 0.11
BNIP3-202ENST00000540159 PRR29P0C7W0 189 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 SLC5A1P13866 664 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 UBASH3AP57075 661 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 NTRK3Q16288 839 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 ATL3Q6DD88 541 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 KLHL10Q6JEL2 608 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 METTL16Q86W50 562 aaKnown RBP15.75■□□□□ 0.11
BNIP3-202ENST00000540159 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.75■□□□□ 0.11
BNIP3-202ENST00000540159 TEX13AQ9BXU3 409 aaPredicted RBP15.75■□□□□ 0.11
BNIP3-202ENST00000540159 PCDHB6Q9Y5E3 794 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 POLR2DO15514 142 aaKnown RBP15.75■□□□□ 0.11
BNIP3-202ENST00000540159 UBE3CQ15386 1083 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 PLA2G12BQ9BX93 195 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 KCNH3Q9ULD8 1083 aa15.75■□□□□ 0.11
BNIP3-202ENST00000540159 CYP7A1P22680 504 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 CDC25BP30305 580 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 CABP5Q9NP86 173 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 LMTK3Q96Q04 1460 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 PTPAQ15257 358 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 NOM1Q5C9Z4 860 aaKnown RBP15.74■□□□□ 0.11
BNIP3-202ENST00000540159 VPS54Q9P1Q0 977 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 TNS2Q63HR2 1409 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 PATL2C9JE40 543 aaKnown RBP15.74■□□□□ 0.11
BNIP3-202ENST00000540159 CTIFO43310 598 aaKnown RBP15.74■□□□□ 0.11
BNIP3-202ENST00000540159 CDKL5O76039 1030 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 AFMP43652 599 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 DYNLL1P63167 89 aaKnown RBP15.74■□□□□ 0.11
BNIP3-202ENST00000540159 WTAPQ15007 396 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
BNIP3-202ENST00000540159 UTP14AQ9BVJ6 771 aaKnown RBP15.74■□□□□ 0.11
BNIP3-202ENST00000540159 MYH15Q9Y2K3 1946 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 NUTM2BA6NNL0 878 aaPredicted RBP15.73■□□□□ 0.11
BNIP3-202ENST00000540159 NUTM2EB1AL46 878 aaPredicted RBP15.73■□□□□ 0.11
BNIP3-202ENST00000540159 STX17P56962 302 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 RTN1Q16799 776 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 SLC51AQ86UW1 340 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 NUTM2AQ8IVF1 878 aaPredicted RBP15.73■□□□□ 0.11
BNIP3-202ENST00000540159 AKAP11Q9UKA4 1901 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 BMP6P22004 513 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 ANKRD7Q92527 254 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 MAP3K14Q99558 947 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 HSD3B7Q9H2F3 369 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 SERTAD1Q9UHV2 236 aa15.73■□□□□ 0.11
BNIP3-202ENST00000540159 TOB1P50616 345 aaPredicted RBP15.72■□□□□ 0.11
BNIP3-202ENST00000540159 TPM4P67936 248 aa15.72■□□□□ 0.11
BNIP3-202ENST00000540159 SMYD4Q8IYR2 804 aaPredicted RBP15.72■□□□□ 0.11
BNIP3-202ENST00000540159 PPP1R13BQ96KQ4 1090 aa15.72■□□□□ 0.11
BNIP3-202ENST00000540159 TOGARAM1Q9Y4F4 1720 aa15.72■□□□□ 0.11
BNIP3-202ENST00000540159 CDK11BP21127 795 aaKnown RBP15.72■□□□□ 0.11
BNIP3-202ENST00000540159 CRKLP46109 303 aaKnown RBP15.72■□□□□ 0.11
BNIP3-202ENST00000540159 CHRNDQ07001 517 aa15.72■□□□□ 0.11
BNIP3-202ENST00000540159 C3orf67Q6ZVT6 689 aa15.72■□□□□ 0.11
BNIP3-202ENST00000540159 DNAI1Q9UI46 699 aa15.72■□□□□ 0.11
BNIP3-202ENST00000540159 DCCP43146 1447 aa15.72■□□□□ 0.11
BNIP3-202ENST00000540159 ERICH2A1L162 156 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 UQCRFS1P1P0C7P4 283 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 ARID4AP29374 1257 aaPredicted RBP15.71■□□□□ 0.11
BNIP3-202ENST00000540159 ADKP55263 362 aaKnown RBP15.71■□□□□ 0.11
BNIP3-202ENST00000540159 NOSTRINQ8IVI9 506 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 UBAC1Q9BSL1 405 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 CDHR2Q9BYE9 1310 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 KCNQ2O43526 872 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 NMT2O60551 498 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 RBM6P78332 1123 aaKnown RBP15.71■□□□□ 0.11
BNIP3-202ENST00000540159 ERCC6LQ2NKX8 1250 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 EARS2Q5JPH6 523 aaKnown RBP15.71■□□□□ 0.11
BNIP3-202ENST00000540159 NYAP1Q6ZVC0 841 aa15.71■□□□□ 0.11
BNIP3-202ENST00000540159 KIF18AQ8NI77 898 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms