RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ADAMTS19Q8TE59 1207 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 RBM17Q96I25 401 aaKnown RBP9.05□□□□□ -0.96
CCDC60-204ENST00000539847 CAPNS2Q96L46 248 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 FUCA2Q9BTY2 467 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 RTFDC1Q9BY42 306 aaPredicted RBP9.05□□□□□ -0.96
CCDC60-204ENST00000539847 ZBTB3Q9H5J0 574 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 OGFRQ9NZT2 677 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 RABGEF1Q9UJ41 708 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
CCDC60-204ENST00000539847 ABCC12Q96J65 1359 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 RPAP1Q9BWH6 1393 aaPredicted RBP9.04□□□□□ -0.96
CCDC60-204ENST00000539847 ARHGAP33O14559 1287 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 RAB11FIP3O75154 756 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 GNAI2P04899 355 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 ZSCAN22P10073 491 aaPredicted RBP9.04□□□□□ -0.96
CCDC60-204ENST00000539847 RFX1P22670 979 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 HSPA4P34932 840 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 PIP4K2AP48426 406 aaPredicted RBP9.04□□□□□ -0.96
CCDC60-204ENST00000539847 ATP8B2P98198 1209 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 GABPB1Q06547 395 aaPredicted RBP9.04□□□□□ -0.96
CCDC60-204ENST00000539847 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 PARP10Q53GL7 1025 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 VARS2Q5ST30 1063 aaKnown RBP9.04□□□□□ -0.96
CCDC60-204ENST00000539847 KIF6Q6ZMV9 814 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 NIM1KQ8IY84 436 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 ZNF34Q8IZ26 560 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 SUPT20HQ8NEM7 779 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 ZSCAN31Q96LW9 406 aaPredicted RBP9.04□□□□□ -0.96
CCDC60-204ENST00000539847 GPR101Q96P66 508 aaPredicted RBP9.04□□□□□ -0.96
CCDC60-204ENST00000539847 TMX4Q9H1E5 349 aaPredicted RBP9.04□□□□□ -0.96
CCDC60-204ENST00000539847 ADARB2Q9NS39 739 aaKnown RBP9.04□□□□□ -0.96
CCDC60-204ENST00000539847 BABAM1Q9NWV8 329 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 PGAP2Q9UHJ9 254 aa9.04□□□□□ -0.96
CCDC60-204ENST00000539847 EPS15P42566 896 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 CTDSPL2Q05D32 466 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 SLC10A5Q5PT55 438 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 PPP1R42Q7Z4L9 355 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.03□□□□□ -0.96
CCDC60-204ENST00000539847 CHMP4AQ9BY43 222 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 TM6SF1Q9BZW5 370 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 LRRCC1Q9C099 1032 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 GPRC5DQ9NZD1 345 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 PCDH10Q9P2E7 1040 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 ATP6V0A2Q9Y487 856 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 PAXBP1Q9Y5B6 917 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 CCDC171Q6TFL3 1326 aa9.03□□□□□ -0.96
CCDC60-204ENST00000539847 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.97
CCDC60-204ENST00000539847 BBOX1O75936 387 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 NTSR2O95665 410 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 EIF4A1P60842 406 aaKnown RBP9.02□□□□□ -0.97
CCDC60-204ENST00000539847 MLLT1Q03111 559 aaPredicted RBP9.02□□□□□ -0.97
CCDC60-204ENST00000539847 CST9Q5W186 159 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 SAPCD2Q86UD0 394 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 RNF214Q8ND24 703 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 OTUD7AQ8TE49 926 aaPredicted RBP9.02□□□□□ -0.97
CCDC60-204ENST00000539847 KCNB2Q92953 911 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 NLRP3Q96P20 1036 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 SH2B1Q9NRF2 756 aaPredicted RBP9.02□□□□□ -0.97
CCDC60-204ENST00000539847 ZNRF3Q9ULT6 936 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 LIMCH1Q9UPQ0 1083 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 GJA3Q9Y6H8 435 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 CACNA1SQ13698 1873 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 UBN2Q6ZU65 1347 aa9.02□□□□□ -0.97
CCDC60-204ENST00000539847 COL4A5P29400 1685 aa9.01□□□□□ -0.97
CCDC60-204ENST00000539847 FAM177BA6PVY3 158 aa9.01□□□□□ -0.97
CCDC60-204ENST00000539847 PPIP5K2O43314 1243 aa9.01□□□□□ -0.97
CCDC60-204ENST00000539847 NEMFO60524 1076 aa9.01□□□□□ -0.97
CCDC60-204ENST00000539847 CCDC192P0DO97 292 aa9.01□□□□□ -0.97
CCDC60-204ENST00000539847 TTC14Q96N46 770 aa9.01□□□□□ -0.97
CCDC60-204ENST00000539847 PPP1R12CQ9BZL4 782 aa9.01□□□□□ -0.97
CCDC60-204ENST00000539847 ALDH8A1Q9H2A2 487 aaPredicted RBP9.01□□□□□ -0.97
CCDC60-204ENST00000539847 HMX1Q9NP08 348 aaPredicted RBP9.01□□□□□ -0.97
CCDC60-204ENST00000539847 LAMB4A4D0S4 1761 aa9.01□□□□□ -0.97
CCDC60-204ENST00000539847 ELP1O95163 1332 aa9.01□□□□□ -0.97
CCDC60-204ENST00000539847 PDE4DIPQ5VU43 2346 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 SMTNL1A8MU46 457 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 ELL2O00472 640 aaPredicted RBP9□□□□□ -0.97
CCDC60-204ENST00000539847 STX6O43752 255 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 GADD45BO75293 160 aaPredicted RBP9□□□□□ -0.97
CCDC60-204ENST00000539847 TUBB4AP04350 444 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 CXCL9Q07325 125 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 FUT2Q10981 343 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 NOGQ13253 232 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 DCTN1Q14203 1278 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 DHX8Q14562 1220 aaKnown RBP9□□□□□ -0.97
CCDC60-204ENST00000539847 TNIP1Q15025 636 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 HSP90AB3PQ58FF7 597 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 SUSD4Q5VX71 490 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 CYP4F22Q6NT55 531 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 TTLL7Q6ZT98 887 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 CDC37L1Q7L3B6 337 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 SAMD7Q7Z3H4 446 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 SP8Q8IXZ3 490 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 MEIS3Q99687 375 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 THUMPD2Q9BTF0 503 aaKnown RBP9□□□□□ -0.97
CCDC60-204ENST00000539847 UTP14AQ9BVJ6 771 aaKnown RBP9□□□□□ -0.97
CCDC60-204ENST00000539847 SLC4A5Q9BY07 1137 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 KCND1Q9NSA2 647 aa9□□□□□ -0.97
CCDC60-204ENST00000539847 CGNQ9P2M7 1197 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms