RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 APPBP2Q92624 585 aa15.34■□□□□ 0.05
TSPAN9-207ENST00000539631 PUS7LQ9H0K6 701 aaKnown RBP15.34■□□□□ 0.05
TSPAN9-207ENST00000539631 ARMT1Q9H993 441 aa15.34■□□□□ 0.05
TSPAN9-207ENST00000539631 MBD4O95243 580 aa15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 PRKG1Q13976 671 aa15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 LRRFIP1Q32MZ4 808 aaKnown RBP15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 SH3BP5LQ7L8J4 393 aa15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 CERS3Q8IU89 383 aa15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 MAPKAPK5Q8IW41 473 aa15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 OSBP2Q969R2 916 aa15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 GBA2Q9HCG7 927 aaPredicted RBP15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 FZD1Q9UP38 647 aa15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 SIPA1L1O43166 1804 aa15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 RPAP1Q9BWH6 1393 aaPredicted RBP15.33■□□□□ 0.04
TSPAN9-207ENST00000539631 DDX60LQ5H9U9 1706 aaKnown RBP15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 DDTLA6NHG4 134 aaPredicted RBP15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 M0R2C6 588 aa15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 NF2P35240 595 aa15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 USP5P45974 858 aa15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 SUPT20HL1Q3ZLR7 823 aa15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 MOB2Q70IA6 237 aa15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 ZSCAN29Q8IWY8 852 aaPredicted RBP15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 C2orf69Q8N8R5 385 aa15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 SEC62Q99442 399 aaKnown RBP15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 OSBPL5Q9H0X9 879 aaPredicted RBP15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 BAZ2AQ9UIF9 1905 aaKnown RBP15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 FLT1P17948 1338 aa15.32■□□□□ 0.04
TSPAN9-207ENST00000539631 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
TSPAN9-207ENST00000539631 PRKAB2O43741 272 aa15.31■□□□□ 0.04
TSPAN9-207ENST00000539631 SDSP20132 328 aa15.31■□□□□ 0.04
TSPAN9-207ENST00000539631 TTLL12Q14166 644 aaPredicted RBP15.31■□□□□ 0.04
TSPAN9-207ENST00000539631 ZMYM1Q5SVZ6 1142 aa15.31■□□□□ 0.04
TSPAN9-207ENST00000539631 AIDAQ96BJ3 306 aa15.31■□□□□ 0.04
TSPAN9-207ENST00000539631 CRNKL1Q9BZJ0 848 aaKnown RBP15.31■□□□□ 0.04
TSPAN9-207ENST00000539631 ABT1Q9ULW3 272 aaKnown RBP15.31■□□□□ 0.04
TSPAN9-207ENST00000539631 COL2A1P02458 1487 aaPredicted RBP15.3■□□□□ 0.04
TSPAN9-207ENST00000539631 SDR42E1Q8WUS8 393 aa15.3■□□□□ 0.04
TSPAN9-207ENST00000539631 STRBPQ96SI9 672 aaKnown RBP15.3■□□□□ 0.04
TSPAN9-207ENST00000539631 SAP30BPQ9UHR5 308 aaKnown RBP15.3■□□□□ 0.04
TSPAN9-207ENST00000539631 ANGEL1Q9UNK9 670 aaKnown RBP15.3■□□□□ 0.04
TSPAN9-207ENST00000539631 TLL2Q9Y6L7 1015 aa15.3■□□□□ 0.04
TSPAN9-207ENST00000539631 ATRNL1Q5VV63 1379 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 UBE2Q2LH0YL09 131 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 GPAA1O43292 621 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 USP2O75604 605 aaPredicted RBP15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 SLURP2P0DP57 97 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 NMIQ13287 307 aaPredicted RBP15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 MIGA2Q7L4E1 593 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 ARMC9Q7Z3E5 817 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 SAPCD2Q86UD0 394 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 FAM227BQ96M60 508 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 CSRNP1Q96S65 589 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 SLC4A4Q9Y6R1 1079 aa15.29■□□□□ 0.04
TSPAN9-207ENST00000539631 A0A0D9SFI3 127 aa15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 PPP1R12BO60237 982 aaPredicted RBP15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 HUNKP57058 714 aa15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 FKBP1BP68106 108 aa15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 SLC4A8Q2Y0W8 1093 aa15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 CCDC129Q6ZRS4 1044 aa15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 TICAM2Q86XR7 235 aa15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 HELLSQ9NRZ9 838 aa15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 MKRN1Q9UHC7 482 aaKnown RBP15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 PALD1Q9ULE6 856 aa15.28■□□□□ 0.04
TSPAN9-207ENST00000539631 MAP3K11Q16584 847 aa15.27■□□□□ 0.04
TSPAN9-207ENST00000539631 DCAF15Q66K64 600 aa15.27■□□□□ 0.04
TSPAN9-207ENST00000539631 HOOK2Q96ED9 719 aa15.27■□□□□ 0.04
TSPAN9-207ENST00000539631 DHX36Q9H2U1 1008 aaKnown RBP15.27■□□□□ 0.04
TSPAN9-207ENST00000539631 DCP1AQ9NPI6 582 aaPredicted RBP15.27■□□□□ 0.04
TSPAN9-207ENST00000539631 ATP8A2Q9NTI2 1148 aa15.27■□□□□ 0.04
TSPAN9-207ENST00000539631 ATAD5Q96QE3 1844 aa15.27■□□□□ 0.03
TSPAN9-207ENST00000539631 LAMB1P07942 1786 aa15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 RASSF10A6NK89 507 aa15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 IREB2P48200 963 aaKnown RBP15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 DEFB115Q30KQ5 88 aa15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 MCMDC2Q4G0Z9 681 aa15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 LDLRAD1Q5T700 205 aa15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 ZNF341Q9BYN7 854 aa15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 DIAPH3Q9NSV4 1193 aa15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 MCM9Q9NXL9 1143 aa15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
TSPAN9-207ENST00000539631 GSG1L2A8MUP6 293 aa15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 HIP1O00291 1037 aa15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 POLR3DP05423 398 aaPredicted RBP15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 GNAT2P19087 354 aa15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 EVX2Q03828 476 aa15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 CWC27Q6UX04 472 aaKnown RBP15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 KLRG1Q96E93 195 aa15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 PI4KBQ9UBF8 816 aa15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 MYH8P13535 1937 aa15.25■□□□□ 0.03
TSPAN9-207ENST00000539631 PATL2C9JE40 543 aaKnown RBP15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 TBC1D12O60347 775 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 HLA-DOAP06340 250 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 CYP2D6P10635 497 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 PLCD1P51178 756 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 MAP3K10Q02779 954 aa15.24■□□□□ 0.03
TSPAN9-207ENST00000539631 BMP2KLQ5H9B9 411 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms