RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
UBE3B-209ENST00000539584 NBPF3Q9H094 633 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 FOXP1Q9H334 677 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-209ENST00000539584 CEP131Q9UPN4 1083 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 FHOD1Q9Y613 1164 aa15.22■□□□□ 0.03
UBE3B-209ENST00000539584 TADA3O75528 432 aa15.21■□□□□ 0.03
UBE3B-209ENST00000539584 FMNL1O95466 1100 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-209ENST00000539584 IFNAR1P17181 557 aa15.21■□□□□ 0.03
UBE3B-209ENST00000539584 MCAMP43121 646 aa15.21■□□□□ 0.03
UBE3B-209ENST00000539584 MDM2Q00987 491 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-209ENST00000539584 PNOCQ13519 176 aa15.21■□□□□ 0.03
UBE3B-209ENST00000539584 NOSTRINQ8IVI9 506 aa15.21■□□□□ 0.03
UBE3B-209ENST00000539584 TMTC2Q8N394 836 aa15.21■□□□□ 0.03
UBE3B-209ENST00000539584 GPR161Q8N6U8 529 aaKnown RBP15.21■□□□□ 0.03
UBE3B-209ENST00000539584 BAG1Q99933 345 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-209ENST00000539584 PCDHA5Q9Y5H7 936 aa15.21■□□□□ 0.03
UBE3B-209ENST00000539584 CCDC196A0A1B0GTZ2 297 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 GOLGA8AA7E2F4 631 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 ARID4AP29374 1257 aaPredicted RBP15.21■□□□□ 0.02
UBE3B-209ENST00000539584 LONRF3Q496Y0 759 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 TEX35Q5T0J7 233 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 JAKMIP3Q5VZ66 844 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 SPECC1LQ69YQ0 1117 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 CYB5R4Q7L1T6 521 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 CADPS2Q86UW7 1296 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 TBC1D10CQ8IV04 446 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 NUTM2AQ8IVF1 878 aaPredicted RBP15.21■□□□□ 0.02
UBE3B-209ENST00000539584 KRT23Q9C075 422 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 GJB4Q9NTQ9 266 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 FANCLQ9NW38 375 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 PPP2R2CQ9Y2T4 447 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 SLC12A7Q9Y666 1083 aa15.21■□□□□ 0.02
UBE3B-209ENST00000539584 RIC1Q4ADV7 1423 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 ANKRD18BA2A2Z9 1011 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 ZNF18P17022 549 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 PTPREP23469 700 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 ERCC5P28715 1186 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-209ENST00000539584 CDC27P30260 824 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 SARSP49591 514 aaKnown RBP15.2■□□□□ 0.02
UBE3B-209ENST00000539584 PPP2R5BQ15173 497 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 CHRNA2Q15822 529 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 LDHAL6AQ6ZMR3 332 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 NFXL1Q6ZNB6 911 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 TMEM139Q8IV31 216 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 TRIM22Q8IYM9 498 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 PARP3Q9Y6F1 533 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 UBN2Q6ZU65 1347 aa15.2■□□□□ 0.02
UBE3B-209ENST00000539584 PATL2C9JE40 543 aaKnown RBP15.19■□□□□ 0.02
UBE3B-209ENST00000539584 URI1O94763 535 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-209ENST00000539584 MMP1P03956 469 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-209ENST00000539584 CASQ1P31415 396 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 MAP3K9P80192 1104 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 TUBB2AQ13885 445 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 POSTNQ15063 836 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 TMEM67Q5HYA8 995 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 DPF2Q92785 391 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 TUBB2BQ9BVA1 445 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 NAA15Q9BXJ9 866 aaKnown RBP15.19■□□□□ 0.02
UBE3B-209ENST00000539584 CALCOCO1Q9P1Z2 691 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 APPP05067 770 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 GNAT2P19087 354 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 SART3Q15020 963 aaKnown RBP15.19■□□□□ 0.02
UBE3B-209ENST00000539584 GIGYF2Q6Y7W6 1299 aaKnown RBP15.19■□□□□ 0.02
UBE3B-209ENST00000539584 MICU3Q86XE3 530 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 AIDAQ96BJ3 306 aa15.19■□□□□ 0.02
UBE3B-209ENST00000539584 STRBPQ96SI9 672 aaKnown RBP15.19■□□□□ 0.02
UBE3B-209ENST00000539584 VWA3AA6NCI4 1184 aa15.18■□□□□ 0.02
UBE3B-209ENST00000539584 PDE8BO95263 885 aa15.18■□□□□ 0.02
UBE3B-209ENST00000539584 FOXP4Q8IVH2 680 aaPredicted RBP15.18■□□□□ 0.02
UBE3B-209ENST00000539584 VGLL2Q8N8G2 317 aa15.18■□□□□ 0.02
UBE3B-209ENST00000539584 SMARCE1Q969G3 411 aa15.18■□□□□ 0.02
UBE3B-209ENST00000539584 FAM217BQ9NTX9 383 aaPredicted RBP15.18■□□□□ 0.02
UBE3B-209ENST00000539584 ZNF532Q9HCE3 1301 aa15.18■□□□□ 0.02
UBE3B-209ENST00000539584 LRP6O75581 1613 aa15.18■□□□□ 0.02
UBE3B-209ENST00000539584 B4E1Z4 1266 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 DEXIO95424 95 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 STARD3NLO95772 234 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 IL2RBP14784 551 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 PDE6AP16499 860 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 CDK11BP21127 795 aaKnown RBP15.17■□□□□ 0.02
UBE3B-209ENST00000539584 ITGA6P23229 1130 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 MORC3Q14149 939 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 ISM2Q6H9L7 571 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 TTLL11Q8NHH1 800 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 SPATA20Q8TB22 786 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 PHKBQ93100 1093 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 FAM89AQ96GI7 184 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 AIFM3Q96NN9 605 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 CARD10Q9BWT7 1032 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 CNNM1Q9NRU3 951 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 SRPRBQ9Y5M8 271 aaKnown RBP15.17■□□□□ 0.02
UBE3B-209ENST00000539584 TCRBV5S4A2TA0A5A2 114 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 RANBP6O60518 1105 aaKnown RBP15.17■□□□□ 0.02
UBE3B-209ENST00000539584 IGSF3O75054 1194 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 RAB11FIP4Q86YS3 637 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 LPIN2Q92539 896 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 RABGGTAQ92696 567 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms