RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CNNM3Q8NE01 707 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 PHKBQ93100 1093 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 FAM217BQ9NTX9 383 aaPredicted RBP11.11□□□□□ -0.63
CDH13-204ENST00000539548 ARGLU1Q9NWB6 273 aaPredicted RBP11.11□□□□□ -0.63
CDH13-204ENST00000539548 HOOK1Q9UJC3 728 aaKnown RBP11.11□□□□□ -0.63
CDH13-204ENST00000539548 DENND2AQ9ULE3 1009 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 RIC1Q4ADV7 1423 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 MYO5AQ9Y4I1 1855 aaKnown RBP11.11□□□□□ -0.63
CDH13-204ENST00000539548 STK36Q9NRP7 1315 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 GOLGA6L9A6NEM1 432 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 EFCAB8A8MWE9 144 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 TMEM232C9JQI7 657 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 TADA3O75528 432 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 METTL24Q5JXM2 366 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
CDH13-204ENST00000539548 MNS1Q8NEH6 495 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 FAM89AQ96GI7 184 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 LY9Q9HBG7 655 aa11.11□□□□□ -0.63
CDH13-204ENST00000539548 B4E1Z4 1266 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 ATP8B1O43520 1251 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 RANBP6O60518 1105 aaKnown RBP11.1□□□□□ -0.63
CDH13-204ENST00000539548 URI1O94763 535 aaPredicted RBP11.1□□□□□ -0.63
CDH13-204ENST00000539548 PNMA6AP0CW24 399 aaPredicted RBP11.1□□□□□ -0.63
CDH13-204ENST00000539548 BMP6P22004 513 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 LIFRP42702 1097 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 PDE4BQ07343 736 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 SENP2Q9HC62 589 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 PIH1D3Q9NQM4 214 aaKnown RBP11.1□□□□□ -0.63
CDH13-204ENST00000539548 INTS13Q9NVM9 706 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 PPP2R2CQ9Y2T4 447 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 UBN2Q6ZU65 1347 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 CDHR2Q9BYE9 1310 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 VWA3AA6NCI4 1184 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 GOLGA8AA7E2F4 631 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 FANCGO15287 622 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 STX10O60499 249 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
CDH13-204ENST00000539548 APPP05067 770 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 RXRAP19793 462 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 PLA2G4AP47712 749 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 SSRP1Q08945 709 aaKnown RBP11.1□□□□□ -0.63
CDH13-204ENST00000539548 NT5DC1Q5TFE4 455 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 TMCO3Q6UWJ1 677 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 LDHAL6AQ6ZMR3 332 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 MICU3Q86XE3 530 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 WASF1Q92558 559 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
CDH13-204ENST00000539548 NOL10Q9BSC4 688 aaKnown RBP11.1□□□□□ -0.63
CDH13-204ENST00000539548 SPATA31A3Q5VYP0 1347 aa11.1□□□□□ -0.63
CDH13-204ENST00000539548 CHD4Q14839 1912 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 CCDC66A2RUB6 948 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 ZNF18P17022 549 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 SARSP49591 514 aaKnown RBP11.09□□□□□ -0.63
CDH13-204ENST00000539548 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 TMEM67Q5HYA8 995 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 NFXL1Q6ZNB6 911 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 NOSTRINQ8IVI9 506 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 MLKLQ8NB16 471 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 TTLL11Q8NHH1 800 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 STRBPQ96SI9 672 aaKnown RBP11.09□□□□□ -0.63
CDH13-204ENST00000539548 BAG1Q99933 345 aaPredicted RBP11.09□□□□□ -0.63
CDH13-204ENST00000539548 CARD6Q9BX69 1037 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 MAN1B1Q9UKM7 699 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 ZNF532Q9HCE3 1301 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 NID2Q14112 1375 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 DCCP43146 1447 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 TCRBV5S4A2TA0A5A2 114 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 PDE6AP16499 860 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 IFNAR1P17181 557 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 PTPREP23469 700 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 GOLGA8FQ08AF8 430 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 GOLGA8DPQ0D2H9 430 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 KIF6Q6ZMV9 814 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 STK11IPQ8N1F8 1099 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 VGLL2Q8N8G2 317 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 ENOX1Q8TC92 643 aaKnown RBP11.09□□□□□ -0.63
CDH13-204ENST00000539548 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
CDH13-204ENST00000539548 ST7Q9NRC1 585 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 DACH1Q9UI36 760 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 TBC1D2BQ9UPU7 963 aa11.09□□□□□ -0.63
CDH13-204ENST00000539548 LRP6O75581 1613 aa11.08□□□□□ -0.63
CDH13-204ENST00000539548 ANKRD18BA2A2Z9 1011 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 FOXN1O15353 648 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 IDH1O75874 414 aaKnown RBP11.08□□□□□ -0.64
CDH13-204ENST00000539548 UQCRFS1P1P0C7P4 283 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 ITGA6P23229 1130 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 ARID4AP29374 1257 aaPredicted RBP11.08□□□□□ -0.64
CDH13-204ENST00000539548 CASQ1P31415 396 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 TOB1P50616 345 aaPredicted RBP11.08□□□□□ -0.64
CDH13-204ENST00000539548 MORC3Q14149 939 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 POSTNQ15063 836 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 SAFBQ15424 915 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDH13-204ENST00000539548 SPECC1LQ69YQ0 1117 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 TC2NQ8N9U0 490 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 TRIML1Q8N9V2 468 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
CDH13-204ENST00000539548 SLC26A6Q9BXS9 759 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms