RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 FAM83AQ86UY5 434 aa15.68■□□□□ 0.1
CCDC42-202ENST00000539522 APOBEC3FQ8IUX4 373 aaKnown RBP15.68■□□□□ 0.1
CCDC42-202ENST00000539522 SDR42E1Q8WUS8 393 aa15.68■□□□□ 0.1
CCDC42-202ENST00000539522 FLT1P17948 1338 aa15.68■□□□□ 0.1
CCDC42-202ENST00000539522 LAMB1P07942 1786 aa15.67■□□□□ 0.1
CCDC42-202ENST00000539522 COL2A1P02458 1487 aaPredicted RBP15.67■□□□□ 0.1
CCDC42-202ENST00000539522 RPAP1Q9BWH6 1393 aaPredicted RBP15.67■□□□□ 0.1
CCDC42-202ENST00000539522 MYO1BO43795 1136 aa15.67■□□□□ 0.1
CCDC42-202ENST00000539522 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
CCDC42-202ENST00000539522 CHMLP26374 656 aa15.67■□□□□ 0.1
CCDC42-202ENST00000539522 FSTL1Q12841 308 aa15.67■□□□□ 0.1
CCDC42-202ENST00000539522 ZSCAN25Q6NSZ9 544 aa15.67■□□□□ 0.1
CCDC42-202ENST00000539522 MAPKAPK5Q8IW41 473 aa15.67■□□□□ 0.1
CCDC42-202ENST00000539522 TEX11Q8IYF3 940 aa15.67■□□□□ 0.1
CCDC42-202ENST00000539522 TGFBRAP1Q8WUH2 860 aa15.67■□□□□ 0.1
CCDC42-202ENST00000539522 FAM151AQ8WW52 585 aa15.67■□□□□ 0.1
CCDC42-202ENST00000539522 EPB41L4AQ9HCS5 686 aaPredicted RBP15.67■□□□□ 0.1
CCDC42-202ENST00000539522 GSG1L2A8MUP6 293 aa15.66■□□□□ 0.1
CCDC42-202ENST00000539522 GPAA1O43292 621 aa15.66■□□□□ 0.1
CCDC42-202ENST00000539522 ENTPD3O75355 529 aa15.66■□□□□ 0.1
CCDC42-202ENST00000539522 BAG3O95817 575 aa15.66■□□□□ 0.1
CCDC42-202ENST00000539522 PICALMQ13492 652 aa15.66■□□□□ 0.1
CCDC42-202ENST00000539522 VPS53Q5VIR6 699 aa15.66■□□□□ 0.1
CCDC42-202ENST00000539522 TICAM2Q86XR7 235 aa15.66■□□□□ 0.1
CCDC42-202ENST00000539522 SULF1Q8IWU6 871 aa15.66■□□□□ 0.1
CCDC42-202ENST00000539522 OSBPL5Q9H0X9 879 aaPredicted RBP15.66■□□□□ 0.1
CCDC42-202ENST00000539522 MOB2Q70IA6 237 aa15.65■□□□□ 0.1
CCDC42-202ENST00000539522 DCP1AQ9NPI6 582 aaPredicted RBP15.65■□□□□ 0.1
CCDC42-202ENST00000539522 CYP2D6P10635 497 aa15.64■□□□□ 0.09
CCDC42-202ENST00000539522 CWC27Q6UX04 472 aaKnown RBP15.64■□□□□ 0.09
CCDC42-202ENST00000539522 DNAJC18Q9H819 358 aa15.64■□□□□ 0.09
CCDC42-202ENST00000539522 HELLSQ9NRZ9 838 aa15.64■□□□□ 0.09
CCDC42-202ENST00000539522 PPP2R3BQ9Y5P8 575 aa15.64■□□□□ 0.09
CCDC42-202ENST00000539522 CYP2D7A0A087X1C5 515 aa15.63■□□□□ 0.09
CCDC42-202ENST00000539522 PLCG2P16885 1265 aa15.63■□□□□ 0.09
CCDC42-202ENST00000539522 C1QTNF8P60827 252 aa15.63■□□□□ 0.09
CCDC42-202ENST00000539522 MAP3K10Q02779 954 aa15.63■□□□□ 0.09
CCDC42-202ENST00000539522 RRP1BQ14684 758 aaKnown RBP15.63■□□□□ 0.09
CCDC42-202ENST00000539522 MCMDC2Q4G0Z9 681 aa15.63■□□□□ 0.09
CCDC42-202ENST00000539522 AIDAQ96BJ3 306 aa15.63■□□□□ 0.09
CCDC42-202ENST00000539522 SAP30BPQ9UHR5 308 aaKnown RBP15.63■□□□□ 0.09
CCDC42-202ENST00000539522 PALD1Q9ULE6 856 aa15.63■□□□□ 0.09
CCDC42-202ENST00000539522 LAMA4Q16363 1823 aa15.63■□□□□ 0.09
CCDC42-202ENST00000539522 PLCD1P51178 756 aa15.62■□□□□ 0.09
CCDC42-202ENST00000539522 HTRA3P83110 453 aa15.62■□□□□ 0.09
CCDC42-202ENST00000539522 TNFAIP1Q13829 316 aa15.62■□□□□ 0.09
CCDC42-202ENST00000539522 SLC4A8Q2Y0W8 1093 aa15.62■□□□□ 0.09
CCDC42-202ENST00000539522 METTL16Q86W50 562 aaKnown RBP15.62■□□□□ 0.09
CCDC42-202ENST00000539522 NOL10Q9BSC4 688 aaKnown RBP15.62■□□□□ 0.09
CCDC42-202ENST00000539522 TMOD2Q9NZR1 351 aa15.62■□□□□ 0.09
CCDC42-202ENST00000539522 TACC3Q9Y6A5 838 aa15.62■□□□□ 0.09
CCDC42-202ENST00000539522 SLC4A4Q9Y6R1 1079 aa15.62■□□□□ 0.09
CCDC42-202ENST00000539522 ATAD5Q96QE3 1844 aa15.61■□□□□ 0.09
CCDC42-202ENST00000539522 FAM196BA6NMK8 535 aa15.61■□□□□ 0.09
CCDC42-202ENST00000539522 USP2O75604 605 aaPredicted RBP15.61■□□□□ 0.09
CCDC42-202ENST00000539522 CELF2O95319 508 aaKnown RBP15.61■□□□□ 0.09
CCDC42-202ENST00000539522 CRNKL1Q9BZJ0 848 aaKnown RBP15.61■□□□□ 0.09
CCDC42-202ENST00000539522 CCDC171Q6TFL3 1326 aa15.61■□□□□ 0.09
CCDC42-202ENST00000539522 PHIPQ8WWQ0 1821 aa15.61■□□□□ 0.09
CCDC42-202ENST00000539522 CEP350Q5VT06 3117 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 PHF20L1A8MW92 1017 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 PATL2C9JE40 543 aaKnown RBP15.6■□□□□ 0.09
CCDC42-202ENST00000539522 SGSM2O43147 1006 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 HSPD1P10809 573 aaKnown RBP15.6■□□□□ 0.09
CCDC42-202ENST00000539522 USP5P45974 858 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 TNNI2P48788 182 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 JAG1P78504 1218 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 SHROOM1Q2M3G4 852 aaPredicted RBP15.6■□□□□ 0.09
CCDC42-202ENST00000539522 CTR9Q6PD62 1173 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 MIGA2Q7L4E1 593 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 CERS3Q8IU89 383 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 IFNL3Q8IZI9 196 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 ZNF408Q9H9D4 720 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 DIAPH3Q9NSV4 1193 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 ATP8A2Q9NTI2 1148 aa15.6■□□□□ 0.09
CCDC42-202ENST00000539522 PTH1RQ03431 593 aa15.59■□□□□ 0.09
CCDC42-202ENST00000539522 GABPAQ06546 454 aa15.59■□□□□ 0.09
CCDC42-202ENST00000539522 PRKG1Q13976 671 aa15.59■□□□□ 0.09
CCDC42-202ENST00000539522 MAP3K11Q16584 847 aa15.59■□□□□ 0.09
CCDC42-202ENST00000539522 LRRFIP1Q32MZ4 808 aaKnown RBP15.59■□□□□ 0.09
CCDC42-202ENST00000539522 NKX2-3Q8TAU0 364 aa15.59■□□□□ 0.09
CCDC42-202ENST00000539522 CSRNP1Q96S65 589 aa15.59■□□□□ 0.09
CCDC42-202ENST00000539522 NBPF3Q9H094 633 aa15.59■□□□□ 0.09
CCDC42-202ENST00000539522 DOCK1Q14185 1865 aa15.59■□□□□ 0.09
CCDC42-202ENST00000539522 GREB1LQ9C091 1923 aaPredicted RBP15.58■□□□□ 0.09
CCDC42-202ENST00000539522 USP17L12C9JPN9 530 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 USP17L21D6R901 530 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 HIP1O00291 1037 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 APLP1P51693 650 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 LDLRAD1Q5T700 205 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 C12orf60Q5U649 245 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 KLRG1Q96E93 195 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 ESYT1Q9BSJ8 1104 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 MCM9Q9NXL9 1143 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 ZNF112Q9UJU3 913 aa15.58■□□□□ 0.08
CCDC42-202ENST00000539522 MYH8P13535 1937 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 UBE2Q2LH0YL09 131 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 SBK1Q52WX2 424 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 GIMAP6Q6P9H5 292 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms