RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 SLC4A8Q2Y0W8 1093 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
CTCFL-212ENST00000539382 MYH2Q9UKX2 1941 aa13.1□□□□□ -0.31
CTCFL-212ENST00000539382 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
CTCFL-212ENST00000539382 MROH7-TTC4A0A0A0MT08 1334 aa13.09□□□□□ -0.31
CTCFL-212ENST00000539382 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
CTCFL-212ENST00000539382 FBXW7Q969H0 707 aa13.09□□□□□ -0.31
CTCFL-212ENST00000539382 ZNF274Q96GC6 653 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-212ENST00000539382 ZKSCAN3Q9BRR0 538 aa13.09□□□□□ -0.31
CTCFL-212ENST00000539382 TMX4Q9H1E5 349 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-212ENST00000539382 NAP1L2Q9ULW6 460 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-212ENST00000539382 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
CTCFL-212ENST00000539382 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-212ENST00000539382 SH2B2O14492 632 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-212ENST00000539382 STX6O43752 255 aa13.09□□□□□ -0.31
CTCFL-212ENST00000539382 USP17L8P0C7I0 530 aa13.09□□□□□ -0.31
CTCFL-212ENST00000539382 PPP4CP60510 307 aa13.09□□□□□ -0.31
CTCFL-212ENST00000539382 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
CTCFL-212ENST00000539382 GIMAP6Q6P9H5 292 aa13.09□□□□□ -0.31
CTCFL-212ENST00000539382 KLF18A0A0U1RQI7 1052 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 PRDM1O75626 825 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 BTDP43251 543 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 AOC3Q16853 763 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 FOXD4L6Q3SYB3 417 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-212ENST00000539382 TMED8Q6PL24 325 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-212ENST00000539382 FOXD4L3Q6VB84 417 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-212ENST00000539382 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
CTCFL-212ENST00000539382 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 ATP8A2Q9NTI2 1148 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 ANGEL1Q9UNK9 670 aaKnown RBP13.08□□□□□ -0.32
CTCFL-212ENST00000539382 SCN9AQ15858 1988 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 GPR75-ASB3A0A0A6YYF3 556 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 RHBDL3P58872 404 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 GSTO1P78417 241 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 DDX11Q96FC9 970 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 GBP4Q96PP9 640 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 LY9Q9HBG7 655 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 TOMM22Q9NS69 142 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 MTMR6Q9Y217 621 aa13.08□□□□□ -0.32
CTCFL-212ENST00000539382 RXRAP19793 462 aa13.07□□□□□ -0.32
CTCFL-212ENST00000539382 TTLL6Q8N841 843 aa13.07□□□□□ -0.32
CTCFL-212ENST00000539382 SMARCC2Q8TAQ2 1214 aa13.07□□□□□ -0.32
CTCFL-212ENST00000539382 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
CTCFL-212ENST00000539382 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTCFL-212ENST00000539382 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
CTCFL-212ENST00000539382 EYA3Q99504 573 aa13.07□□□□□ -0.32
CTCFL-212ENST00000539382 GAKO14976 1311 aa13.07□□□□□ -0.32
CTCFL-212ENST00000539382 FGRP09769 529 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 ZSCAN22P10073 491 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-212ENST00000539382 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 KRT23Q9C075 422 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 CNNM2Q9H8M5 875 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 DAGLAQ9Y4D2 1042 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 DLEC1Q9Y238 1755 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
CTCFL-212ENST00000539382 GOLGA8BA8MQT2 603 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 G3V3G9 751 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 ECE2O60344 883 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 IGSF3O75054 1194 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 BAG3O95817 575 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 LDHCP07864 332 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 SCNN1DP51172 638 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 TMEM67Q5HYA8 995 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 LARP1BQ659C4 914 aaKnown RBP13.06□□□□□ -0.32
CTCFL-212ENST00000539382 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 MYL10Q9BUA6 226 aa13.06□□□□□ -0.32
CTCFL-212ENST00000539382 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 IFIT3O14879 490 aaKnown RBP13.05□□□□□ -0.32
CTCFL-212ENST00000539382 USP5P45974 858 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 PLCD1P51178 756 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 KIAA2012Q0VF49 1180 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 SBK1Q52WX2 424 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 APOA5Q6Q788 366 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 CDC37L1Q7L3B6 337 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 MAPKAPK5Q8IW41 473 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 MTFR1LQ9H019 292 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 TTF2Q9UNY4 1162 aaKnown RBP13.05□□□□□ -0.32
CTCFL-212ENST00000539382 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
CTCFL-212ENST00000539382 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 KIF13BQ9NQT8 1826 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 ADAMTSL1Q8N6G6 1762 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 YDJCA8MPS7 323 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 FDPSP14324 419 aaKnown RBP13.05□□□□□ -0.32
CTCFL-212ENST00000539382 DACT2Q5SW24 774 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 C12orf60Q5U649 245 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 DYNLL2Q96FJ2 89 aa13.05□□□□□ -0.32
CTCFL-212ENST00000539382 RNF41Q9H4P4 317 aaPredicted RBP13.05□□□□□ -0.32
CTCFL-212ENST00000539382 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
CTCFL-212ENST00000539382 VPS37CA5D8V6 355 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-212ENST00000539382 PSDA5PKW4 1024 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-212ENST00000539382 DDX11L8A8MPP1 907 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 F13A1P00488 732 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 CDC27P30260 824 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 ADD1P35611 737 aaKnown RBP13.04□□□□□ -0.32
CTCFL-212ENST00000539382 SGMS1Q86VZ5 419 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 CCDC144CPQ8IYA2 1237 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms