RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CCDC8Q9H0W5 538 aaPredicted RBP23.41■■□□□ 1.34
TNFRSF1A-212ENST00000539372 TLR7Q9NYK1 1049 aaKnown RBP23.41■■□□□ 1.34
TNFRSF1A-212ENST00000539372 ATRNL1Q5VV63 1379 aa23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 DDTLA6NHG4 134 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 LDHCP07864 332 aa23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 SLURP2P0DP57 97 aa23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 SOX10P56693 466 aa23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 PPATQ06203 517 aa23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 TAF1CQ15572 869 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 DBNLQ9UJU6 430 aaKnown RBP23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 RCAN3Q9UKA8 241 aa23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 EXOC6BQ9Y2D4 811 aa23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 COG6Q9Y2V7 657 aa23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 TRIM17Q9Y577 477 aa23.4■■□□□ 1.34
TNFRSF1A-212ENST00000539372 RGS19P49795 217 aa23.39■■□□□ 1.33
TNFRSF1A-212ENST00000539372 FBXO46Q6PJ61 603 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF1A-212ENST00000539372 CD99L2Q8TCZ2 262 aa23.39■■□□□ 1.33
TNFRSF1A-212ENST00000539372 EAF2Q96CJ1 260 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF1A-212ENST00000539372 ZFYVE28Q9HCC9 887 aa23.39■■□□□ 1.33
TNFRSF1A-212ENST00000539372 BTBD19C9JJ37 291 aa23.38■■□□□ 1.33
TNFRSF1A-212ENST00000539372 NOL9Q5SY16 702 aaKnown RBP23.38■■□□□ 1.33
TNFRSF1A-212ENST00000539372 ERO1AQ96HE7 468 aa23.38■■□□□ 1.33
TNFRSF1A-212ENST00000539372 PHF20L1A8MW92 1017 aa23.37■■□□□ 1.33
TNFRSF1A-212ENST00000539372 CYP2E1P05181 493 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF1A-212ENST00000539372 ZAP70P43403 619 aa23.37■■□□□ 1.33
TNFRSF1A-212ENST00000539372 SP3Q02447 781 aa23.37■■□□□ 1.33
TNFRSF1A-212ENST00000539372 MLLT1Q03111 559 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF1A-212ENST00000539372 OTOP1Q7RTM1 612 aa23.37■■□□□ 1.33
TNFRSF1A-212ENST00000539372 DOCK2Q92608 1830 aa23.37■■□□□ 1.33
TNFRSF1A-212ENST00000539372 NAA16Q6N069 864 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF1A-212ENST00000539372 ZNF512BQ96KM6 892 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF1A-212ENST00000539372 CAP1Q01518 475 aa23.35■■□□□ 1.33
TNFRSF1A-212ENST00000539372 ERC1Q8IUD2 1116 aa23.35■■□□□ 1.33
TNFRSF1A-212ENST00000539372 SH3RF3Q8TEJ3 882 aaPredicted RBP23.35■■□□□ 1.33
TNFRSF1A-212ENST00000539372 PIH1D3Q9NQM4 214 aaKnown RBP23.35■■□□□ 1.33
TNFRSF1A-212ENST00000539372 DDX19BQ9UMR2 479 aa23.35■■□□□ 1.33
TNFRSF1A-212ENST00000539372 AACSQ86V21 672 aa23.34■■□□□ 1.33
TNFRSF1A-212ENST00000539372 TEX11Q8IYF3 940 aa23.34■■□□□ 1.33
TNFRSF1A-212ENST00000539372 SCYL3Q8IZE3 742 aa23.34■■□□□ 1.33
TNFRSF1A-212ENST00000539372 NOL10Q9BSC4 688 aaKnown RBP23.34■■□□□ 1.33
TNFRSF1A-212ENST00000539372 PICK1Q9NRD5 415 aa23.34■■□□□ 1.33
TNFRSF1A-212ENST00000539372 AATFQ9NY61 560 aaKnown RBP eCLIP23.34■■□□□ 1.33
TNFRSF1A-212ENST00000539372 KCNH4Q9UQ05 1017 aa23.34■■□□□ 1.33
TNFRSF1A-212ENST00000539372 NPM3O75607 178 aaKnown RBP23.33■■□□□ 1.33
TNFRSF1A-212ENST00000539372 MAP4K4O95819 1239 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF1A-212ENST00000539372 MAP3K10Q02779 954 aa23.33■■□□□ 1.33
TNFRSF1A-212ENST00000539372 ADGRA1Q86SQ6 560 aa23.33■■□□□ 1.33
TNFRSF1A-212ENST00000539372 IL1RAPL2Q9NP60 686 aa23.33■■□□□ 1.33
TNFRSF1A-212ENST00000539372 ZBTB40Q9NUA8 1239 aa23.33■■□□□ 1.33
TNFRSF1A-212ENST00000539372 FAM196BA6NMK8 535 aa23.32■■□□□ 1.32
TNFRSF1A-212ENST00000539372 APBB1O00213 710 aa23.32■■□□□ 1.32
TNFRSF1A-212ENST00000539372 OSBPL5Q9H0X9 879 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF1A-212ENST00000539372 EFCC1Q9HA90 598 aa23.32■■□□□ 1.32
TNFRSF1A-212ENST00000539372 ZCCHC17Q9NP64 241 aaKnown RBP23.32■■□□□ 1.32
TNFRSF1A-212ENST00000539372 NDUFB9Q9Y6M9 179 aa23.32■■□□□ 1.32
TNFRSF1A-212ENST00000539372 ZHX2Q9Y6X8 837 aa23.32■■□□□ 1.32
TNFRSF1A-212ENST00000539372 TLR2O60603 784 aa23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 BAG3O95817 575 aa23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 PTPRAP18433 802 aa23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 HSP90AB4PQ58FF6 505 aa23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 C20orf194Q5TEA3 1177 aa23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 SIRT2Q8IXJ6 389 aa23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 RPAP2Q8IXW5 612 aaPredicted RBP23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 RHPN1Q8TCX5 695 aa23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 BCL11AQ9H165 835 aa23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.31■■□□□ 1.322e-7■■■□□ 17.4
TNFRSF1A-212ENST00000539372 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 MAST2Q6P0Q8 1798 aa23.31■■□□□ 1.32
TNFRSF1A-212ENST00000539372 PDHXO00330 501 aa23.3■■□□□ 1.32
TNFRSF1A-212ENST00000539372 MOGSQ13724 837 aa23.3■■□□□ 1.32
TNFRSF1A-212ENST00000539372 ANKRD23Q86SG2 305 aa23.3■■□□□ 1.32
TNFRSF1A-212ENST00000539372 PTPN22Q9Y2R2 807 aa23.3■■□□□ 1.32
TNFRSF1A-212ENST00000539372 CTNND1O60716 968 aaKnown RBP23.29■■□□□ 1.32
TNFRSF1A-212ENST00000539372 HMMRO75330 724 aa23.29■■□□□ 1.32
TNFRSF1A-212ENST00000539372 IDH1O75874 414 aaKnown RBP23.29■■□□□ 1.32
TNFRSF1A-212ENST00000539372 MYO5AQ9Y4I1 1855 aaKnown RBP23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 CXCL11O14625 94 aa23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 TBC1D12O60347 775 aa23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 PLCG2P16885 1265 aa23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 CYP7A1P22680 504 aa23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 PPP4CP60510 307 aa23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 CCDC84Q86UT8 332 aaPredicted RBP23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 TGFBRAP1Q8WUH2 860 aa23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 ARHGAP39Q9C0H5 1083 aa23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 ANTXR1Q9H6X2 564 aa23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 AFG3L2Q9Y4W6 797 aa23.28■■□□□ 1.32
TNFRSF1A-212ENST00000539372 ECM2O94769 699 aaPredicted RBP23.27■■□□□ 1.32
TNFRSF1A-212ENST00000539372 DYNLL1P63167 89 aaKnown RBP23.27■■□□□ 1.32
TNFRSF1A-212ENST00000539372 MAPKAPK5Q8IW41 473 aa23.27■■□□□ 1.32
TNFRSF1A-212ENST00000539372 CPA4Q9UI42 421 aa23.27■■□□□ 1.32
TNFRSF1A-212ENST00000539372 COL2A1P02458 1487 aaPredicted RBP23.27■■□□□ 1.32
TNFRSF1A-212ENST00000539372 GPAT2Q6NUI2 795 aa23.26■■□□□ 1.31
TNFRSF1A-212ENST00000539372 MAGEB6Q8N7X4 407 aa23.26■■□□□ 1.31
TNFRSF1A-212ENST00000539372 KIF1BPQ96EK5 621 aa23.26■■□□□ 1.31
TNFRSF1A-212ENST00000539372 CHMP4BQ9H444 224 aaKnown RBP23.26■■□□□ 1.31
TNFRSF1A-212ENST00000539372 DOCK1Q14185 1865 aa23.26■■□□□ 1.31
TNFRSF1A-212ENST00000539372 A0A0G2JLL6 359 aaPredicted RBP23.25■■□□□ 1.31
TNFRSF1A-212ENST00000539372 TRIM75PA6NK02 468 aa23.25■■□□□ 1.31
TNFRSF1A-212ENST00000539372 LACTBP83111 547 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms